RNA–Protein interactions for RNA: ENST00000513153.5

LINC01088-210, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 695 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-210ENST00000513153 CEP295Q9C0D2 2601 aa0.92□□□□□ -2.26
LINC01088-210ENST00000513153 SPTAN1Q13813 2472 aaKnown RBP0.92□□□□□ -2.26
LINC01088-210ENST00000513153 LAMA2P24043 3122 aaKnown RBP0.92□□□□□ -2.26
LINC01088-210ENST00000513153 A0A096LNT2 108 aa0.92□□□□□ -2.26
LINC01088-210ENST00000513153 A0A0D9SFI3 127 aa0.92□□□□□ -2.26
LINC01088-210ENST00000513153 A0A1B0GU69 56 aa0.92□□□□□ -2.26
LINC01088-210ENST00000513153 RPL38P63173 70 aaKnown RBP0.92□□□□□ -2.26
LINC01088-210ENST00000513153 DEFB112Q30KQ8 113 aa0.92□□□□□ -2.26
LINC01088-210ENST00000513153 SPINK9Q5DT21 86 aa0.92□□□□□ -2.26
LINC01088-210ENST00000513153 WFDC9Q8NEX5 89 aa0.92□□□□□ -2.26
LINC01088-210ENST00000513153 ANKRD36CQ5JPF3 1778 aa0.92□□□□□ -2.26
LINC01088-210ENST00000513153 USP34Q70CQ2 3546 aa0.92□□□□□ -2.26
LINC01088-210ENST00000513153 SPTBP11277 2137 aa0.92□□□□□ -2.26
LINC01088-210ENST00000513153 MAP1BP46821 2468 aaKnown RBP0.92□□□□□ -2.26
LINC01088-210ENST00000513153 HECTD1Q9ULT8 2610 aa0.91□□□□□ -2.26
LINC01088-210ENST00000513153 NAV3Q8IVL0 2385 aa0.91□□□□□ -2.26
LINC01088-210ENST00000513153 MYO15AQ9UKN7 3530 aa0.91□□□□□ -2.26
LINC01088-210ENST00000513153 PLXNA1Q9UIW2 1896 aa0.91□□□□□ -2.26
LINC01088-210ENST00000513153 LOC730098B7Z3J9 87 aa0.91□□□□□ -2.26
LINC01088-210ENST00000513153 IFI27P40305 119 aaPredicted RBP0.91□□□□□ -2.26
LINC01088-210ENST00000513153 SPRR4Q96PI1 79 aa0.91□□□□□ -2.26
LINC01088-210ENST00000513153 GAFA1Q96PS6 74 aa0.91□□□□□ -2.26
LINC01088-210ENST00000513153 SPTBN2O15020 2390 aa0.91□□□□□ -2.26
LINC01088-210ENST00000513153 C2CD3Q4AC94 2353 aa0.91□□□□□ -2.26
LINC01088-210ENST00000513153 SIPA1L3O60292 1781 aaPredicted RBP0.91□□□□□ -2.26
LINC01088-210ENST00000513153 RGPD2P0DJD1 1756 aa0.91□□□□□ -2.26
LINC01088-210ENST00000513153 XIRP2A4UGR9 3374 aa0.9□□□□□ -2.26
LINC01088-210ENST00000513153 MED12Q93074 2177 aa0.9□□□□□ -2.26
LINC01088-210ENST00000513153 CFAP47Q6ZTR5 3102 aa0.9□□□□□ -2.27
LINC01088-210ENST00000513153 IGF2RP11717 2491 aa0.9□□□□□ -2.27
LINC01088-210ENST00000513153 DOPEY1Q5JWR5 2465 aa0.9□□□□□ -2.27
LINC01088-210ENST00000513153 A0A087WWC5 75 aa0.9□□□□□ -2.27
LINC01088-210ENST00000513153 C10orf142B7Z368 130 aa0.9□□□□□ -2.27
LINC01088-210ENST00000513153 SFTA3P0C7M3 94 aa0.9□□□□□ -2.27
LINC01088-210ENST00000513153 UBE2D4Q9Y2X8 147 aa0.9□□□□□ -2.27
LINC01088-210ENST00000513153 EYSQ5T1H1 3165 aa0.9□□□□□ -2.27
LINC01088-210ENST00000513153 DCHS1Q96JQ0 3298 aa0.9□□□□□ -2.27
LINC01088-210ENST00000513153 TEP1Q99973 2627 aaKnown RBP0.9□□□□□ -2.27
LINC01088-210ENST00000513153 COL4A6Q14031 1691 aa0.9□□□□□ -2.27
LINC01088-210ENST00000513153 PDCD11Q14690 1871 aaKnown RBP0.9□□□□□ -2.27
LINC01088-210ENST00000513153 ABCA4P78363 2273 aa0.9□□□□□ -2.27
LINC01088-210ENST00000513153 MTORP42345 2549 aa0.89□□□□□ -2.27
LINC01088-210ENST00000513153 COL4A1P02462 1669 aa0.89□□□□□ -2.27
LINC01088-210ENST00000513153 FXYD6-FXYD2A0A087WZ82 144 aa0.89□□□□□ -2.27
LINC01088-210ENST00000513153 COX6A2Q02221 97 aa0.89□□□□□ -2.27
LINC01088-210ENST00000513153 PIGYQ3MUY2 71 aa0.89□□□□□ -2.27
LINC01088-210ENST00000513153 SPATA8Q6RVD6 105 aa0.89□□□□□ -2.27
LINC01088-210ENST00000513153 BPTFQ12830 3046 aa0.89□□□□□ -2.27
LINC01088-210ENST00000513153 TECTAO75443 2155 aa0.89□□□□□ -2.27
LINC01088-210ENST00000513153 RELNP78509 3460 aa0.88□□□□□ -2.27
LINC01088-210ENST00000513153 LOC285556D6RIA3 1793 aa0.88□□□□□ -2.27
LINC01088-210ENST00000513153 ASPMQ8IZT6 3477 aa0.88□□□□□ -2.27
LINC01088-210ENST00000513153 TRBV7-4A0A0J9YYF1 115 aa0.88□□□□□ -2.27
LINC01088-210ENST00000513153 G3V318 75 aa0.88□□□□□ -2.27
LINC01088-210ENST00000513153 SPINK7P58062 85 aa0.88□□□□□ -2.27
LINC01088-210ENST00000513153 DEFB121Q5J5C9 76 aa0.88□□□□□ -2.27
LINC01088-210ENST00000513153 USMG5Q96IX5 58 aa0.88□□□□□ -2.27
LINC01088-210ENST00000513153 LINC00472Q9H8W2 130 aa0.88□□□□□ -2.27
LINC01088-210ENST00000513153 LRRC37A2A6NM11 1700 aa0.88□□□□□ -2.27
LINC01088-210ENST00000513153 LRRC37AA6NMS7 1700 aa0.88□□□□□ -2.27
LINC01088-210ENST00000513153 PRUNE2Q8WUY3 3088 aa0.88□□□□□ -2.27
LINC01088-210ENST00000513153 CFAP54Q96N23 3096 aa0.88□□□□□ -2.27
LINC01088-210ENST00000513153 DOCK11Q5JSL3 2073 aa0.88□□□□□ -2.27
LINC01088-210ENST00000513153 SPG11Q96JI7 2443 aa0.88□□□□□ -2.27
LINC01088-210ENST00000513153 UBR5O95071 2799 aaPredicted RBP0.88□□□□□ -2.27
LINC01088-210ENST00000513153 SDK1Q7Z5N4 2213 aa0.88□□□□□ -2.27
LINC01088-210ENST00000513153 ZFHX3Q15911 3703 aa0.88□□□□□ -2.27
LINC01088-210ENST00000513153 FLG2Q5D862 2391 aaPredicted RBP0.88□□□□□ -2.27
LINC01088-210ENST00000513153 NBPF19A0A087WUL8 3843 aa0.87□□□□□ -2.27
LINC01088-210ENST00000513153 PCNX1Q96RV3 2341 aa0.87□□□□□ -2.27
LINC01088-210ENST00000513153 SETD2Q9BYW2 2564 aaPredicted RBP0.87□□□□□ -2.27
LINC01088-210ENST00000513153 ASCC3Q8N3C0 2202 aaKnown RBP0.87□□□□□ -2.27
LINC01088-210ENST00000513153 TRAV21A0A0B4J279 112 aa0.87□□□□□ -2.27
LINC01088-210ENST00000513153 SPTY2D1-AS1A0A0U1RR47 76 aa0.87□□□□□ -2.27
LINC01088-210ENST00000513153 ATXN8Q156A1 80 aa0.87□□□□□ -2.27
LINC01088-210ENST00000513153 FXYD6Q9H0Q3 95 aa0.87□□□□□ -2.27
LINC01088-210ENST00000513153 CRIPTQ9P021 101 aa0.87□□□□□ -2.27
LINC01088-210ENST00000513153 LRRK2Q5S007 2527 aa0.87□□□□□ -2.27
LINC01088-210ENST00000513153 TLN1Q9Y490 2541 aaKnown RBP0.87□□□□□ -2.27
LINC01088-210ENST00000513153 C5orf42Q9H799 3197 aa0.87□□□□□ -2.27
LINC01088-210ENST00000513153 TSC2P49815 1807 aa0.87□□□□□ -2.27
LINC01088-210ENST00000513153 ITPR3Q14573 2671 aa0.86□□□□□ -2.27
LINC01088-210ENST00000513153 CREBBPQ92793 2442 aa0.86□□□□□ -2.27
LINC01088-210ENST00000513153 SNRPGP15A8MWD9 76 aa0.86□□□□□ -2.27
LINC01088-210ENST00000513153 I3L3M4 83 aa0.86□□□□□ -2.27
LINC01088-210ENST00000513153 HMGA1P17096 107 aaKnown RBP0.86□□□□□ -2.27
LINC01088-210ENST00000513153 Q9Y3F1 56 aa0.86□□□□□ -2.27
LINC01088-210ENST00000513153 CSMD1Q96PZ7 3565 aa0.86□□□□□ -2.27
LINC01088-210ENST00000513153 ITPR1Q14643 2758 aa0.86□□□□□ -2.27
LINC01088-210ENST00000513153 A0A0G2JMZ2 1700 aa0.86□□□□□ -2.27
LINC01088-210ENST00000513153 DDX60LQ5H9U9 1706 aaKnown RBP0.86□□□□□ -2.27
LINC01088-210ENST00000513153 DDX60Q8IY21 1712 aaKnown RBP0.86□□□□□ -2.27
LINC01088-210ENST00000513153 STAB1Q9NY15 2570 aa0.86□□□□□ -2.27
LINC01088-210ENST00000513153 PTPRQQ9UMZ3 2332 aa0.86□□□□□ -2.27
LINC01088-210ENST00000513153 IGSF10Q6WRI0 2623 aa0.85□□□□□ -2.27
LINC01088-210ENST00000513153 LAMA5O15230 3695 aa0.85□□□□□ -2.27
LINC01088-210ENST00000513153 CFAP46Q8IYW2 2715 aa0.85□□□□□ -2.27
LINC01088-210ENST00000513153 K7EIL1 84 aa0.85□□□□□ -2.27
LINC01088-210ENST00000513153 C3orf79P0CE67 100 aa0.85□□□□□ -2.27
LINC01088-210ENST00000513153 COX8AP10176 69 aa0.85□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms