RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 RPS27P42677 84 aaKnown RBP-0.68□□□□□ -2.52
PDGFC-208ENST00000512711 TFF3Q07654 80 aa-0.68□□□□□ -2.52
PDGFC-208ENST00000512711 CPSF1Q10570 1443 aaKnown RBP-0.68□□□□□ -2.52
PDGFC-208ENST00000512711 OVOS2Q6IE36 1432 aa-0.68□□□□□ -2.52
PDGFC-208ENST00000512711 HEPN1Q6WQI6 88 aa-0.68□□□□□ -2.52
PDGFC-208ENST00000512711 NRKQ7Z2Y5 1582 aa-0.68□□□□□ -2.52
PDGFC-208ENST00000512711 MYOZ3Q8TDC0 251 aa-0.68□□□□□ -2.52
PDGFC-208ENST00000512711 SKA2Q8WVK7 121 aaPredicted RBP-0.68□□□□□ -2.52
PDGFC-208ENST00000512711 SCAPERQ9BY12 1400 aa-0.68□□□□□ -2.52
PDGFC-208ENST00000512711 SEC11CQ9BY50 192 aa-0.68□□□□□ -2.52
PDGFC-208ENST00000512711 LRRC37A3O60309 1634 aa-0.68□□□□□ -2.52
PDGFC-208ENST00000512711 MAP3K4Q9Y6R4 1608 aa-0.68□□□□□ -2.52
PDGFC-208ENST00000512711 PREX1Q8TCU6 1659 aa-0.69□□□□□ -2.52
PDGFC-208ENST00000512711 ITSN2Q9NZM3 1697 aa-0.69□□□□□ -2.52
PDGFC-208ENST00000512711 NWD2Q9ULI1 1742 aa-0.69□□□□□ -2.52
PDGFC-208ENST00000512711 DIP2AQ14689 1571 aa-0.69□□□□□ -2.52
PDGFC-208ENST00000512711 FHAD1B1AJZ9 1412 aa-0.69□□□□□ -2.52
PDGFC-208ENST00000512711 M0QY20 66 aa-0.69□□□□□ -2.52
PDGFC-208ENST00000512711 SCTP09683 121 aa-0.69□□□□□ -2.52
PDGFC-208ENST00000512711 HTN3P15516 51 aa-0.69□□□□□ -2.52
PDGFC-208ENST00000512711 AKAP14Q86UN6 197 aa-0.69□□□□□ -2.52
PDGFC-208ENST00000512711 DEFB124Q8NES8 71 aa-0.69□□□□□ -2.52
PDGFC-208ENST00000512711 SAR1AQ9NR31 198 aa-0.69□□□□□ -2.52
PDGFC-208ENST00000512711 CDC42SE2Q9NRR3 84 aa-0.69□□□□□ -2.52
PDGFC-208ENST00000512711 SMPXQ9UHP9 88 aa-0.69□□□□□ -2.52
PDGFC-208ENST00000512711 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.69□□□□□ -2.52
PDGFC-208ENST00000512711 V9GYH0 126 aa-0.69□□□□□ -2.52
PDGFC-208ENST00000512711 PLEKHH2Q8IVE3 1493 aa-0.69□□□□□ -2.52
PDGFC-208ENST00000512711 CFAP43Q8NDM7 1665 aa-0.69□□□□□ -2.52
PDGFC-208ENST00000512711 MAPKBP1O60336 1514 aa-0.69□□□□□ -2.52
PDGFC-208ENST00000512711 LMTK2Q8IWU2 1503 aa-0.69□□□□□ -2.52
PDGFC-208ENST00000512711 KDM5DQ9BY66 1539 aa-0.69□□□□□ -2.52
PDGFC-208ENST00000512711 ANKRD26Q9UPS8 1709 aa-0.69□□□□□ -2.52
PDGFC-208ENST00000512711 ROCK2O75116 1388 aaKnown RBP-0.7□□□□□ -2.52
PDGFC-208ENST00000512711 PLIN4Q96Q06 1357 aa-0.7□□□□□ -2.52
PDGFC-208ENST00000512711 MYH4Q9Y623 1939 aa-0.7□□□□□ -2.52
PDGFC-208ENST00000512711 MYOM3Q5VTT5 1437 aa-0.7□□□□□ -2.52
PDGFC-208ENST00000512711 RRBP1Q9P2E9 1410 aaKnown RBP-0.7□□□□□ -2.52
PDGFC-208ENST00000512711 KIF14Q15058 1648 aa-0.7□□□□□ -2.52
PDGFC-208ENST00000512711 TRAV30A0A087WSZ9 112 aa-0.7□□□□□ -2.52
PDGFC-208ENST00000512711 A0A1B0GX51 115 aa-0.7□□□□□ -2.52
PDGFC-208ENST00000512711 TSTD3H0UI37 97 aa-0.7□□□□□ -2.52
PDGFC-208ENST00000512711 STATHP02808 62 aa-0.7□□□□□ -2.52
PDGFC-208ENST00000512711 APELAP0DMC3 54 aa-0.7□□□□□ -2.52
PDGFC-208ENST00000512711 COX8AP10176 69 aa-0.7□□□□□ -2.52
PDGFC-208ENST00000512711 SCGB1A1P11684 91 aa-0.7□□□□□ -2.52
PDGFC-208ENST00000512711 RRAS2P62070 204 aaPredicted RBP-0.7□□□□□ -2.52
PDGFC-208ENST00000512711 CCL8P80075 99 aa-0.7□□□□□ -2.52
PDGFC-208ENST00000512711 COX17Q14061 63 aa-0.7□□□□□ -2.52
PDGFC-208ENST00000512711 C10orf128Q5T292 105 aa-0.7□□□□□ -2.52
PDGFC-208ENST00000512711 MMGT1Q8N4V1 131 aa-0.7□□□□□ -2.52
PDGFC-208ENST00000512711 SPTSSAQ969W0 71 aa-0.7□□□□□ -2.52
PDGFC-208ENST00000512711 CDKN2A-AS1Q9UH64 79 aa-0.7□□□□□ -2.52
PDGFC-208ENST00000512711 V9GYQ6 96 aa-0.7□□□□□ -2.52
PDGFC-208ENST00000512711 A2ML1A8K2U0 1454 aa-0.7□□□□□ -2.52
PDGFC-208ENST00000512711 GAPVD1Q14C86 1478 aa-0.7□□□□□ -2.52
PDGFC-208ENST00000512711 LRRC9Q6ZRR7 1453 aa-0.7□□□□□ -2.52
PDGFC-208ENST00000512711 DDX60Q8IY21 1712 aaKnown RBP-0.7□□□□□ -2.52
PDGFC-208ENST00000512711 ABCC6O95255 1503 aa-0.7□□□□□ -2.52
PDGFC-208ENST00000512711 NWD1Q149M9 1564 aa-0.7□□□□□ -2.52
PDGFC-208ENST00000512711 TMEM2Q9UHN6 1383 aa-0.7□□□□□ -2.52
PDGFC-208ENST00000512711 FOCADQ5VW36 1801 aa-0.71□□□□□ -2.52
PDGFC-208ENST00000512711 CC2D2AQ9P2K1 1620 aa-0.71□□□□□ -2.52
PDGFC-208ENST00000512711 C5P01031 1676 aa-0.71□□□□□ -2.52
PDGFC-208ENST00000512711 NHSQ6T4R5 1651 aa-0.71□□□□□ -2.52
PDGFC-208ENST00000512711 POLA1P09884 1462 aaPredicted RBP-0.71□□□□□ -2.52
PDGFC-208ENST00000512711 NLRP1Q9C000 1473 aa-0.71□□□□□ -2.52
PDGFC-208ENST00000512711 FAM24AA6NFZ4 105 aa-0.71□□□□□ -2.52
PDGFC-208ENST00000512711 F8VRH5 84 aa-0.71□□□□□ -2.52
PDGFC-208ENST00000512711 FABP1P07148 127 aa-0.71□□□□□ -2.52
PDGFC-208ENST00000512711 ACYP1P07311 99 aa-0.71□□□□□ -2.52
PDGFC-208ENST00000512711 SFTA3P0C7M3 94 aa-0.71□□□□□ -2.52
PDGFC-208ENST00000512711 S100PP25815 95 aa-0.71□□□□□ -2.52
PDGFC-208ENST00000512711 HIST1H1AQ02539 215 aaPredicted RBP-0.71□□□□□ -2.52
PDGFC-208ENST00000512711 WT1-ASQ06250 92 aa-0.71□□□□□ -2.52
PDGFC-208ENST00000512711 TDRG1Q3Y452 100 aa-0.71□□□□□ -2.52
PDGFC-208ENST00000512711 CCDC153Q494R4 210 aa-0.71□□□□□ -2.52
PDGFC-208ENST00000512711 C9orf153Q5TBE3 101 aa-0.71□□□□□ -2.52
PDGFC-208ENST00000512711 WFDC10BQ8IUB3 73 aa-0.71□□□□□ -2.52
PDGFC-208ENST00000512711 AQP10Q96PS8 301 aa-0.71□□□□□ -2.52
PDGFC-208ENST00000512711 NOP10Q9NPE3 64 aaKnown RBP-0.71□□□□□ -2.52
PDGFC-208ENST00000512711 MRPL40Q9NQ50 206 aaKnown RBP-0.71□□□□□ -2.52
PDGFC-208ENST00000512711 HIGD1BQ9P298 99 aa-0.71□□□□□ -2.52
PDGFC-208ENST00000512711 GINS2Q9Y248 185 aa-0.71□□□□□ -2.52
PDGFC-208ENST00000512711 HSPB11Q9Y547 144 aa-0.71□□□□□ -2.52
PDGFC-208ENST00000512711 ABCC3O15438 1527 aa-0.71□□□□□ -2.52
PDGFC-208ENST00000512711 LTN1O94822 1766 aa-0.71□□□□□ -2.52
PDGFC-208ENST00000512711 MYO3AQ8NEV4 1616 aa-0.71□□□□□ -2.52
PDGFC-208ENST00000512711 ABCC5O15440 1437 aa-0.72□□□□□ -2.52
PDGFC-208ENST00000512711 UACAQ9BZF9 1416 aa-0.72□□□□□ -2.52
PDGFC-208ENST00000512711 A0A096LPF7 62 aa-0.72□□□□□ -2.52
PDGFC-208ENST00000512711 NDUFB6O95139 128 aa-0.72□□□□□ -2.52
PDGFC-208ENST00000512711 NDUFA3O95167 84 aa-0.72□□□□□ -2.52
PDGFC-208ENST00000512711 APOC3P02656 99 aa-0.72□□□□□ -2.52
PDGFC-208ENST00000512711 MRPS10P82664 201 aaKnown RBP-0.72□□□□□ -2.52
PDGFC-208ENST00000512711 TAC4Q86UU9 113 aa-0.72□□□□□ -2.52
PDGFC-208ENST00000512711 USMG5Q96IX5 58 aa-0.72□□□□□ -2.52
PDGFC-208ENST00000512711 RHPN1-AS1Q9BWJ2 59 aa-0.72□□□□□ -2.52
PDGFC-208ENST00000512711 RABAC1Q9UI14 185 aa-0.72□□□□□ -2.52
PDGFC-208ENST00000512711 UGGT1Q9NYU2 1555 aa-0.72□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms