RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 DYNC1H1Q14204 4646 aaKnown RBP1.78□□□□□ -2.12
CLOCK-209ENST00000511124 SMKR1H3BMG3 65 aa1.78□□□□□ -2.12
CLOCK-209ENST00000511124 NDUFC2O95298 119 aa1.78□□□□□ -2.12
CLOCK-209ENST00000511124 FUSP35637 526 aaKnown RBP eCLIP1.78□□□□□ -2.12
CLOCK-209ENST00000511124 RNASE13Q5GAN3 156 aaKnown RBP1.78□□□□□ -2.12
CLOCK-209ENST00000511124 V9GYV3 84 aa1.78□□□□□ -2.12
CLOCK-209ENST00000511124 SACSQ9NZJ4 4579 aa1.78□□□□□ -2.13
CLOCK-209ENST00000511124 TEX49A0A1B0GTD5 131 aa1.77□□□□□ -2.13
CLOCK-209ENST00000511124 LST1O00453 97 aa1.77□□□□□ -2.13
CLOCK-209ENST00000511124 IGKCP01834 107 aa1.77□□□□□ -2.13
CLOCK-209ENST00000511124 APOC3P02656 99 aa1.77□□□□□ -2.13
CLOCK-209ENST00000511124 PYY3Q5JQD4 70 aa1.77□□□□□ -2.13
CLOCK-209ENST00000511124 PCP2Q8IVA1 136 aa1.77□□□□□ -2.13
CLOCK-209ENST00000511124 IGLV9-49A0A0B4J1Y8 123 aa1.77□□□□□ -2.13
CLOCK-209ENST00000511124 CLLU1Q5K131 121 aa1.77□□□□□ -2.13
CLOCK-209ENST00000511124 LINC00242Q5T6M2 205 aa1.77□□□□□ -2.13
CLOCK-209ENST00000511124 SMCR5Q8TEV8 140 aa1.77□□□□□ -2.13
CLOCK-209ENST00000511124 SND1-IT1Q9HBX3 110 aa1.77□□□□□ -2.13
CLOCK-209ENST00000511124 TRAV23DV6A0A075B6W5 121 aa1.77□□□□□ -2.13
CLOCK-209ENST00000511124 C11orf86A6NJI1 115 aa1.77□□□□□ -2.13
CLOCK-209ENST00000511124 H0YGX0 51 aa1.77□□□□□ -2.13
CLOCK-209ENST00000511124 SPANXCQ9NY87 97 aa1.77□□□□□ -2.13
CLOCK-209ENST00000511124 C6orf48Q9UBA6 75 aa1.77□□□□□ -2.13
CLOCK-209ENST00000511124 CDKN2A-AS1Q9UH64 79 aa1.77□□□□□ -2.13
CLOCK-209ENST00000511124 ADGRG4Q8IZF6 3080 aa1.76□□□□□ -2.13
CLOCK-209ENST00000511124 IGKV2-28A0A075B6P5 120 aa1.76□□□□□ -2.13
CLOCK-209ENST00000511124 TMEM218A2RU14 115 aa1.76□□□□□ -2.13
CLOCK-209ENST00000511124 J3QQQ9 107 aa1.76□□□□□ -2.13
CLOCK-209ENST00000511124 IGKV2D-28P01615 120 aa1.76□□□□□ -2.13
CLOCK-209ENST00000511124 IGLC3P0DOY3 106 aa1.76□□□□□ -2.13
CLOCK-209ENST00000511124 RPL39P62891 51 aaKnown RBP1.76□□□□□ -2.13
CLOCK-209ENST00000511124 AMELXQ99217 191 aa1.76□□□□□ -2.13
CLOCK-209ENST00000511124 PMCHL2Q9BQD1 86 aa1.76□□□□□ -2.13
CLOCK-209ENST00000511124 KRTAP9-3Q9BYQ3 159 aa1.76□□□□□ -2.13
CLOCK-209ENST00000511124 TRBV7-6A0A0J9YX20 115 aa1.76□□□□□ -2.13
CLOCK-209ENST00000511124 TIMM17BO60830 172 aa1.76□□□□□ -2.13
CLOCK-209ENST00000511124 SMIM13P0DJ93 91 aa1.76□□□□□ -2.13
CLOCK-209ENST00000511124 WFDC2Q14508 124 aa1.76□□□□□ -2.13
CLOCK-209ENST00000511124 MIR7-3HGQ8N6C7 128 aa1.76□□□□□ -2.13
CLOCK-209ENST00000511124 ZNF625Q96I27 306 aaPredicted RBP1.76□□□□□ -2.13
CLOCK-209ENST00000511124 PMCHL1Q16048 86 aa1.75□□□□□ -2.13
CLOCK-209ENST00000511124 Q6Q795 121 aa1.75□□□□□ -2.13
CLOCK-209ENST00000511124 ZANQ9Y493 2812 aa1.75□□□□□ -2.13
CLOCK-209ENST00000511124 DNAH10Q8IVF4 4471 aa1.75□□□□□ -2.13
CLOCK-209ENST00000511124 DNAH11Q96DT5 4516 aa1.75□□□□□ -2.13
CLOCK-209ENST00000511124 TENM1Q9UKZ4 2725 aa1.75□□□□□ -2.13
CLOCK-209ENST00000511124 PSMB2P49721 201 aa1.75□□□□□ -2.13
CLOCK-209ENST00000511124 C2orf82Q6UX34 121 aa1.75□□□□□ -2.13
CLOCK-209ENST00000511124 Q75L30 129 aa1.75□□□□□ -2.13
CLOCK-209ENST00000511124 NCR3O14931 201 aa1.75□□□□□ -2.13
CLOCK-209ENST00000511124 ZNF73O43830 326 aaPredicted RBP1.75□□□□□ -2.13
CLOCK-209ENST00000511124 SMIM6P0DI80 62 aa1.75□□□□□ -2.13
CLOCK-209ENST00000511124 SCGB1C2P0DMR2 95 aa1.75□□□□□ -2.13
CLOCK-209ENST00000511124 PDE6GP18545 87 aa1.75□□□□□ -2.13
CLOCK-209ENST00000511124 MOBPQ13875 183 aa1.75□□□□□ -2.13
CLOCK-209ENST00000511124 TPRXLQ17RH7 258 aa1.75□□□□□ -2.13
CLOCK-209ENST00000511124 DCHS2Q6V1P9 2916 aa1.75□□□□□ -2.13
CLOCK-209ENST00000511124 J3KT08 172 aa1.74□□□□□ -2.13
CLOCK-209ENST00000511124 FABP4P15090 132 aa1.74□□□□□ -2.13
CLOCK-209ENST00000511124 SIGMAR1Q99720 223 aa1.74□□□□□ -2.13
CLOCK-209ENST00000511124 TGP01266 2768 aa1.74□□□□□ -2.13
CLOCK-209ENST00000511124 DEFB105AQ8NG35 78 aa1.74□□□□□ -2.13
CLOCK-209ENST00000511124 SPRR4Q96PI1 79 aa1.74□□□□□ -2.13
CLOCK-209ENST00000511124 Q9BRP9 147 aa1.74□□□□□ -2.13
CLOCK-209ENST00000511124 Q9UF83 564 aa1.74□□□□□ -2.13
CLOCK-209ENST00000511124 A0A1B0GV90 55 aa1.74□□□□□ -2.13
CLOCK-209ENST00000511124 A0A1W2PNN7 141 aa1.74□□□□□ -2.13
CLOCK-209ENST00000511124 SMIM1B2RUZ4 78 aa1.74□□□□□ -2.13
CLOCK-209ENST00000511124 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.74□□□□□ -2.13
CLOCK-209ENST00000511124 NAA38Q9BRA0 125 aaKnown RBP1.74□□□□□ -2.13
CLOCK-209ENST00000511124 KRTAP4-11Q9BYQ6 195 aa1.74□□□□□ -2.13
CLOCK-209ENST00000511124 A0A1B0GX51 115 aa1.73□□□□□ -2.13
CLOCK-209ENST00000511124 A0A1B0GXF2 115 aa1.73□□□□□ -2.13
CLOCK-209ENST00000511124 TSTD3H0UI37 97 aa1.73□□□□□ -2.13
CLOCK-209ENST00000511124 K7EN84 100 aa1.73□□□□□ -2.13
CLOCK-209ENST00000511124 CFC1P0CG37 223 aa1.73□□□□□ -2.13
CLOCK-209ENST00000511124 RBM3P98179 157 aaKnown RBP1.73□□□□□ -2.13
CLOCK-209ENST00000511124 HRNRQ86YZ3 2850 aaPredicted RBP1.73□□□□□ -2.13
CLOCK-209ENST00000511124 VPREB1P12018 145 aa1.73□□□□□ -2.13
CLOCK-209ENST00000511124 FABP2P12104 132 aa1.73□□□□□ -2.13
CLOCK-209ENST00000511124 KRTAP10-8P60410 259 aa1.73□□□□□ -2.13
CLOCK-209ENST00000511124 PRLHP81277 87 aa1.73□□□□□ -2.13
CLOCK-209ENST00000511124 IGLV5-45A0A087WSX0 123 aa1.73□□□□□ -2.13
CLOCK-209ENST00000511124 TMEM223A0PJW6 202 aa1.73□□□□□ -2.13
CLOCK-209ENST00000511124 ZNF22P17026 224 aaPredicted RBP1.73□□□□□ -2.13
CLOCK-209ENST00000511124 HIST1H4GQ99525 98 aa1.73□□□□□ -2.13
CLOCK-209ENST00000511124 EPPK1P58107 5090 aaKnown RBP1.73□□□□□ -2.13
CLOCK-209ENST00000511124 hADV29S1A0JD25 119 aa1.72□□□□□ -2.13
CLOCK-209ENST00000511124 IGIPA6NJ69 53 aa1.72□□□□□ -2.13
CLOCK-209ENST00000511124 C8orf87E5RJ46 101 aa1.72□□□□□ -2.13
CLOCK-209ENST00000511124 KCNQ1DNQ9H478 68 aa1.72□□□□□ -2.13
CLOCK-209ENST00000511124 FLGP20930 4061 aaPredicted RBP1.72□□□□□ -2.13
CLOCK-209ENST00000511124 TRACP01848 142 aa1.72□□□□□ -2.13
CLOCK-209ENST00000511124 KRTAP26-1Q6PEX3 210 aa1.72□□□□□ -2.13
CLOCK-209ENST00000511124 Q5XG85 94 aa1.72□□□□□ -2.13
CLOCK-209ENST00000511124 Q6ZRX8 168 aa1.72□□□□□ -2.13
CLOCK-209ENST00000511124 FAT1Q14517 4588 aa1.72□□□□□ -2.13
CLOCK-209ENST00000511124 TRBV10-3A0A0K0K1G6 114 aa1.72□□□□□ -2.13
CLOCK-209ENST00000511124 IGLV6-57P01721 117 aa1.72□□□□□ -2.13
CLOCK-209ENST00000511124 ANKRD29Q8N6D5 301 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 131.6 ms