RNA–Protein interactions for RNA: ENST00000510710.3

COL1A1-212, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,147 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-212ENST00000510710 RPL24P83731 157 aaKnown RBP8.9□□□□□ -0.98
COL1A1-212ENST00000510710 CEND1Q8N111 149 aa8.9□□□□□ -0.98
COL1A1-212ENST00000510710 C22orf24Q9Y442 160 aa8.9□□□□□ -0.98
COL1A1-212ENST00000510710 TRBV10-2A0A0K0K1G8 114 aa8.88□□□□□ -0.99
COL1A1-212ENST00000510710 A4D1N5 150 aa8.88□□□□□ -0.99
COL1A1-212ENST00000510710 ZNF861PO60384 105 aa8.88□□□□□ -0.99
COL1A1-212ENST00000510710 TSPAN13O95857 204 aa8.88□□□□□ -0.99
COL1A1-212ENST00000510710 DDTP30046 118 aa8.88□□□□□ -0.99
COL1A1-212ENST00000510710 CTAG1AP78358 180 aa8.88□□□□□ -0.99
COL1A1-212ENST00000510710 FXYD2P54710 66 aa8.87□□□□□ -0.99
COL1A1-212ENST00000510710 M0R378 163 aa8.86□□□□□ -0.99
COL1A1-212ENST00000510710 NCR3O14931 201 aa8.86□□□□□ -0.99
COL1A1-212ENST00000510710 MRPL55Q7Z7F7 128 aaKnown RBP8.86□□□□□ -0.99
COL1A1-212ENST00000510710 LINC00167Q96N53 147 aa8.86□□□□□ -0.99
COL1A1-212ENST00000510710 LINC00337Q8N6G1 96 aa8.85□□□□□ -0.99
COL1A1-212ENST00000510710 NKAPP1Q8N9T2 125 aa8.85□□□□□ -0.99
COL1A1-212ENST00000510710 CFC1BP0CG36 223 aa8.84□□□□□ -0.99
COL1A1-212ENST00000510710 CFC1P0CG37 223 aa8.84□□□□□ -0.99
COL1A1-212ENST00000510710 LBHQ53QV2 105 aaPredicted RBP8.84□□□□□ -0.99
COL1A1-212ENST00000510710 BVES-AS1Q5T3Y7 98 aa8.84□□□□□ -0.99
COL1A1-212ENST00000510710 IGLV6-57P01721 117 aa8.83□□□□□ -1
COL1A1-212ENST00000510710 KRTAP9-2Q9BYQ4 174 aa8.83□□□□□ -1
COL1A1-212ENST00000510710 A0A1B0GWB2 263 aa8.82□□□□□ -1
COL1A1-212ENST00000510710 GAGE10A6NGK3 116 aa8.82□□□□□ -1
COL1A1-212ENST00000510710 MUC2Q02817 5179 aa8.82□□□□□ -1
COL1A1-212ENST00000510710 A0A0B4J2C4 111 aa8.81□□□□□ -1
COL1A1-212ENST00000510710 TRBV10-3A0A0K0K1G6 114 aa8.81□□□□□ -1
COL1A1-212ENST00000510710 HINT1P49773 126 aaPredicted RBP8.81□□□□□ -1
COL1A1-212ENST00000510710 TMEM238LA0A1B0GVL6 79 aa8.8□□□□□ -1
COL1A1-212ENST00000510710 A6NJY4 79 aa8.8□□□□□ -1
COL1A1-212ENST00000510710 M0R143 59 aa8.8□□□□□ -1
COL1A1-212ENST00000510710 RPL28P46779 137 aaKnown RBP8.8□□□□□ -1
COL1A1-212ENST00000510710 TYMSOSQ8TAI1 123 aa8.8□□□□□ -1
COL1A1-212ENST00000510710 A0A087X002 238 aa8.79□□□□□ -1
COL1A1-212ENST00000510710 TRAV13-2A0A0B4J235 113 aa8.79□□□□□ -1
COL1A1-212ENST00000510710 RPL37AP8A6NKH3 93 aa8.79□□□□□ -1
COL1A1-212ENST00000510710 CRYGAP11844 174 aa8.79□□□□□ -1
COL1A1-212ENST00000510710 KCNQ1DNQ9H478 68 aa8.79□□□□□ -1
COL1A1-212ENST00000510710 TMEM126AQ9H061 195 aa8.78□□□□□ -1
COL1A1-212ENST00000510710 NHP2Q9NX24 153 aaKnown RBP8.78□□□□□ -1
COL1A1-212ENST00000510710 BCE1O60756 84 aa8.77□□□□□ -1.01
COL1A1-212ENST00000510710 S100A7L2Q5SY68 101 aa8.77□□□□□ -1.01
COL1A1-212ENST00000510710 PCP4L1A6NKN8 68 aa8.76□□□□□ -1.01
COL1A1-212ENST00000510710 PRYO14603 147 aa8.76□□□□□ -1.01
COL1A1-212ENST00000510710 SPRR1AP35321 89 aa8.76□□□□□ -1.01
COL1A1-212ENST00000510710 OR13C6PQ8NH95 151 aa8.76□□□□□ -1.01
COL1A1-212ENST00000510710 A6NDN8 102 aa8.75□□□□□ -1.01
COL1A1-212ENST00000510710 KRTAP4-16G5E9R7 235 aaPredicted RBP8.75□□□□□ -1.01
COL1A1-212ENST00000510710 K7ERJ3 54 aa8.75□□□□□ -1.01
COL1A1-212ENST00000510710 TRAV23DV6A0A075B6W5 121 aa8.74□□□□□ -1.01
COL1A1-212ENST00000510710 RAB37Q96AX2 223 aa8.74□□□□□ -1.01
COL1A1-212ENST00000510710 SNHG12Q9BXW3 62 aa8.74□□□□□ -1.01
COL1A1-212ENST00000510710 ANAPC11Q9NYG5 84 aa8.74□□□□□ -1.01
COL1A1-212ENST00000510710 PRO1854Q9UHT4 67 aa8.74□□□□□ -1.01
COL1A1-212ENST00000510710 LCE2AQ5TA79 106 aaPredicted RBP8.73□□□□□ -1.01
COL1A1-212ENST00000510710 SMIM11BQ8TCY0 68 aa8.73□□□□□ -1.01
COL1A1-212ENST00000510710 ZNF73O43830 326 aaPredicted RBP8.71□□□□□ -1.02
COL1A1-212ENST00000510710 RETNLBQ9BQ08 111 aa8.71□□□□□ -1.02
COL1A1-212ENST00000510710 UBE2AP49459 152 aa8.7□□□□□ -1.02
COL1A1-212ENST00000510710 BATFQ16520 125 aa8.7□□□□□ -1.02
COL1A1-212ENST00000510710 KRTAP13-1Q8IUC0 172 aa8.7□□□□□ -1.02
COL1A1-212ENST00000510710 CBY1Q9Y3M2 126 aa8.7□□□□□ -1.02
COL1A1-212ENST00000510710 KRTAP13-2Q52LG2 175 aa8.69□□□□□ -1.02
COL1A1-212ENST00000510710 CDIP1Q9H305 208 aa8.69□□□□□ -1.02
COL1A1-212ENST00000510710 C6orf99Q4VX62 202 aa8.68□□□□□ -1.02
COL1A1-212ENST00000510710 LINC00304Q8N9R0 145 aa8.68□□□□□ -1.02
COL1A1-212ENST00000510710 TRBV7-6A0A0J9YX20 115 aa8.67□□□□□ -1.02
COL1A1-212ENST00000510710 B5MCH6 92 aa8.67□□□□□ -1.02
COL1A1-212ENST00000510710 H7C2G1 150 aa8.67□□□□□ -1.02
COL1A1-212ENST00000510710 FAM229BQ4G0N7 80 aa8.67□□□□□ -1.02
COL1A1-212ENST00000510710 IGLV7-46A0A075B6I9 117 aa8.65□□□□□ -1.02
COL1A1-212ENST00000510710 TAX1BP3O14907 124 aa8.65□□□□□ -1.02
COL1A1-212ENST00000510710 ELOF1P60002 83 aaKnown RBP8.65□□□□□ -1.02
COL1A1-212ENST00000510710 TPRXLQ17RH7 258 aa8.65□□□□□ -1.02
COL1A1-212ENST00000510710 FAM19A1Q7Z5A9 133 aa8.65□□□□□ -1.02
COL1A1-212ENST00000510710 KRTAP9-6A0A140TA67 174 aa8.64□□□□□ -1.03
COL1A1-212ENST00000510710 ETDCA0A1B0GVM5 59 aa8.64□□□□□ -1.03
COL1A1-212ENST00000510710 TRIAP1O43715 76 aa8.64□□□□□ -1.03
COL1A1-212ENST00000510710 PRLHP81277 87 aa8.64□□□□□ -1.03
COL1A1-212ENST00000510710 Q6ZRX8 168 aa8.64□□□□□ -1.03
COL1A1-212ENST00000510710 COX7BP24311 80 aa8.63□□□□□ -1.03
COL1A1-212ENST00000510710 Q1RN00 199 aa8.63□□□□□ -1.03
COL1A1-212ENST00000510710 Q9BRP9 147 aa8.63□□□□□ -1.03
COL1A1-212ENST00000510710 SMCR5Q8TEV8 140 aa8.62□□□□□ -1.03
COL1A1-212ENST00000510710 FAT4Q6V0I7 4981 aa8.62□□□□□ -1.03
COL1A1-212ENST00000510710 COL5A1-AS1Q5SY13 56 aa8.61□□□□□ -1.03
COL1A1-212ENST00000510710 C9orf118A6NHY6 69 aa8.6□□□□□ -1.03
COL1A1-212ENST00000510710 NAA38Q9BRA0 125 aaKnown RBP8.6□□□□□ -1.03
COL1A1-212ENST00000510710 VAMP3Q15836 100 aa8.59□□□□□ -1.03
COL1A1-212ENST00000510710 LINC00575Q6W349 94 aa8.59□□□□□ -1.03
COL1A1-212ENST00000510710 FAM218AQ96MZ4 157 aa8.59□□□□□ -1.03
COL1A1-212ENST00000510710 H0YGX0 51 aa8.58□□□□□ -1.04
COL1A1-212ENST00000510710 ERC2-IT1O76042 136 aa8.58□□□□□ -1.04
COL1A1-212ENST00000510710 PSMB2P49721 201 aa8.58□□□□□ -1.04
COL1A1-212ENST00000510710 H3BUT2 72 aa8.57□□□□□ -1.04
COL1A1-212ENST00000510710 DHRS4-AS1Q9P1J3 65 aa8.57□□□□□ -1.04
COL1A1-212ENST00000510710 COX6CP09669 75 aa8.55□□□□□ -1.04
COL1A1-212ENST00000510710 C3orf22Q8N5N4 141 aa8.55□□□□□ -1.04
COL1A1-212ENST00000510710 CLEC2BQ92478 149 aa8.55□□□□□ -1.04
COL1A1-212ENST00000510710 HIGD2AQ9BW72 106 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms