RNA–Protein interactions for RNA: ENST00000508538.1

CCDC110-207, Transcript of coiled-coil domain containing 110, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC110, Length 467 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC110-207ENST00000508538 FAM103A1Q9BTL3 118 aaKnown RBP1.44□□□□□ -2.18
CCDC110-207ENST00000508538 UBL5Q9BZL1 73 aa1.44□□□□□ -2.18
CCDC110-207ENST00000508538 PARP4Q9UKK3 1724 aaKnown RBP1.43□□□□□ -2.18
CCDC110-207ENST00000508538 MROH2BQ7Z745 1585 aa1.43□□□□□ -2.18
CCDC110-207ENST00000508538 IQGAP1P46940 1657 aa1.43□□□□□ -2.18
CCDC110-207ENST00000508538 COL14A1Q05707 1796 aaKnown RBP1.43□□□□□ -2.18
CCDC110-207ENST00000508538 DOT1LQ8TEK3 1739 aa1.43□□□□□ -2.18
CCDC110-207ENST00000508538 KIF21BO75037 1637 aa1.42□□□□□ -2.18
CCDC110-207ENST00000508538 ASH1LQ9NR48 2969 aaKnown RBP1.42□□□□□ -2.18
CCDC110-207ENST00000508538 ABCC8Q09428 1581 aa1.42□□□□□ -2.18
CCDC110-207ENST00000508538 GCC2Q8IWJ2 1684 aa1.42□□□□□ -2.18
CCDC110-207ENST00000508538 CPS1P31327 1500 aa1.41□□□□□ -2.18
CCDC110-207ENST00000508538 URB1O60287 2271 aaKnown RBP1.41□□□□□ -2.18
CCDC110-207ENST00000508538 FAM208AQ9UK61 1670 aaKnown RBP1.41□□□□□ -2.18
CCDC110-207ENST00000508538 SAMD9LQ8IVG5 1584 aa1.4□□□□□ -2.19
CCDC110-207ENST00000508538 NMES1Q9C002 83 aa1.4□□□□□ -2.19
CCDC110-207ENST00000508538 FXYD6Q9H0Q3 95 aa1.4□□□□□ -2.19
CCDC110-207ENST00000508538 LY75O60449 1722 aa1.4□□□□□ -2.19
CCDC110-207ENST00000508538 NRXN3Q9Y4C0 1643 aa1.4□□□□□ -2.19
CCDC110-207ENST00000508538 CCL22O00626 93 aa1.39□□□□□ -2.19
CCDC110-207ENST00000508538 COX6B1P14854 86 aa1.39□□□□□ -2.19
CCDC110-207ENST00000508538 TOMM5Q8N4H5 51 aa1.39□□□□□ -2.19
CCDC110-207ENST00000508538 MRPL34Q9BQ48 92 aaKnown RBP1.39□□□□□ -2.19
CCDC110-207ENST00000508538 RICTORQ6R327 1708 aa1.39□□□□□ -2.19
CCDC110-207ENST00000508538 COX6B2Q6YFQ2 88 aa1.38□□□□□ -2.19
CCDC110-207ENST00000508538 KCNQ1DNQ9H478 68 aa1.38□□□□□ -2.19
CCDC110-207ENST00000508538 ABRACLQ9P1F3 81 aa1.38□□□□□ -2.19
CCDC110-207ENST00000508538 CMC2Q9NRP2 79 aa1.37□□□□□ -2.19
CCDC110-207ENST00000508538 DUOX1Q9NRD9 1551 aa1.37□□□□□ -2.19
CCDC110-207ENST00000508538 MRPL33O75394 65 aaKnown RBP1.36□□□□□ -2.19
CCDC110-207ENST00000508538 DDX60LQ5H9U9 1706 aaKnown RBP1.36□□□□□ -2.19
CCDC110-207ENST00000508538 Q5VSD8 79 aa1.36□□□□□ -2.19
CCDC110-207ENST00000508538 TOGARAM1Q9Y4F4 1720 aa1.35□□□□□ -2.19
CCDC110-207ENST00000508538 SNRPGP62308 76 aaKnown RBP1.35□□□□□ -2.19
CCDC110-207ENST00000508538 PRB3Q04118 309 aaPredicted RBP1.35□□□□□ -2.19
CCDC110-207ENST00000508538 DEFB114Q30KQ6 69 aa1.35□□□□□ -2.19
CCDC110-207ENST00000508538 NRAPQ86VF7 1730 aa1.35□□□□□ -2.19
CCDC110-207ENST00000508538 DDX60Q8IY21 1712 aaKnown RBP1.35□□□□□ -2.19
CCDC110-207ENST00000508538 DEFB131BA0A096LNP1 70 aa1.34□□□□□ -2.19
CCDC110-207ENST00000508538 CACNA1EQ15878 2313 aa1.33□□□□□ -2.2
CCDC110-207ENST00000508538 ETDCA0A1B0GVM5 59 aa1.33□□□□□ -2.2
CCDC110-207ENST00000508538 SERF2P84101 59 aa1.32□□□□□ -2.2
CCDC110-207ENST00000508538 NCBP2-AS2Q69YL0 99 aa1.32□□□□□ -2.2
CCDC110-207ENST00000508538 LMO7Q8WWI1 1683 aa1.32□□□□□ -2.2
CCDC110-207ENST00000508538 SPRR1AP35321 89 aa1.31□□□□□ -2.2
CCDC110-207ENST00000508538 TNCP24821 2201 aa1.31□□□□□ -2.2
CCDC110-207ENST00000508538 SMIM27A0A1W2PRY6 76 aa1.3□□□□□ -2.2
CCDC110-207ENST00000508538 LINC01546A6NGU7 62 aa1.3□□□□□ -2.2
CCDC110-207ENST00000508538 PRH1P02810 166 aa1.3□□□□□ -2.2
CCDC110-207ENST00000508538 FCER1GP30273 86 aa1.3□□□□□ -2.2
CCDC110-207ENST00000508538 DEPDC5O75140 1603 aa1.29□□□□□ -2.2
CCDC110-207ENST00000508538 HELZ2Q9BYK8 2649 aaKnown RBP1.29□□□□□ -2.2
CCDC110-207ENST00000508538 K7EMI3 77 aa1.29□□□□□ -2.2
CCDC110-207ENST00000508538 CDKN2A-AS1Q9UH64 79 aa1.29□□□□□ -2.2
CCDC110-207ENST00000508538 DOPEY2Q9Y3R5 2298 aa1.29□□□□□ -2.2
CCDC110-207ENST00000508538 SPRR1BP22528 89 aa1.28□□□□□ -2.2
CCDC110-207ENST00000508538 C4AP0C0L4 1744 aa1.28□□□□□ -2.2
CCDC110-207ENST00000508538 C4BP0C0L5 1744 aa1.28□□□□□ -2.2
CCDC110-207ENST00000508538 PLCE1Q9P212 2302 aa1.27□□□□□ -2.21
CCDC110-207ENST00000508538 TNRC6CQ9HCJ0 1690 aaKnown RBP1.27□□□□□ -2.21
CCDC110-207ENST00000508538 DEFB105AQ8NG35 78 aa1.27□□□□□ -2.21
CCDC110-207ENST00000508538 APLNQ9ULZ1 77 aa1.27□□□□□ -2.21
CCDC110-207ENST00000508538 ZNF462Q96JM2 2506 aa1.26□□□□□ -2.21
CCDC110-207ENST00000508538 NDUFA3O95167 84 aa1.26□□□□□ -2.21
CCDC110-207ENST00000508538 PLNP26678 52 aa1.26□□□□□ -2.21
CCDC110-207ENST00000508538 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.26□□□□□ -2.21
CCDC110-207ENST00000508538 PRO3102Q9H379 93 aa1.25□□□□□ -2.21
CCDC110-207ENST00000508538 CACNA1HO95180 2353 aa1.25□□□□□ -2.21
CCDC110-207ENST00000508538 C2CD3Q4AC94 2353 aa1.25□□□□□ -2.21
CCDC110-207ENST00000508538 IGIPA6NJ69 53 aa1.24□□□□□ -2.21
CCDC110-207ENST00000508538 CRIP1P50238 77 aa1.24□□□□□ -2.21
CCDC110-207ENST00000508538 PTPRZ1P23471 2315 aaPredicted RBP1.24□□□□□ -2.21
CCDC110-207ENST00000508538 USF3Q68DE3 2245 aa1.24□□□□□ -2.21
CCDC110-207ENST00000508538 PIEZO2Q9H5I5 2752 aa1.24□□□□□ -2.21
CCDC110-207ENST00000508538 SPINK4O60575 86 aa1.23□□□□□ -2.21
CCDC110-207ENST00000508538 H1FX-AS1Q4G0G2 97 aa1.23□□□□□ -2.21
CCDC110-207ENST00000508538 SPTBN2O15020 2390 aa1.23□□□□□ -2.21
CCDC110-207ENST00000508538 PTPRQQ9UMZ3 2332 aa1.23□□□□□ -2.21
CCDC110-207ENST00000508538 BPTFQ12830 3046 aa1.23□□□□□ -2.21
CCDC110-207ENST00000508538 M0R1W7 72 aa1.22□□□□□ -2.21
CCDC110-207ENST00000508538 CNOT1A5YKK6 2376 aaKnown RBP1.22□□□□□ -2.21
CCDC110-207ENST00000508538 LINC00158P58513 81 aa1.21□□□□□ -2.22
CCDC110-207ENST00000508538 LELP1Q5T871 98 aa1.2□□□□□ -2.22
CCDC110-207ENST00000508538 TMEM167BQ9NRX6 74 aa1.2□□□□□ -2.22
CCDC110-207ENST00000508538 TTC28Q96AY4 2481 aa1.2□□□□□ -2.22
CCDC110-207ENST00000508538 H0YGX0 51 aa1.19□□□□□ -2.22
CCDC110-207ENST00000508538 WFDC13Q8IUB5 93 aa1.19□□□□□ -2.22
CCDC110-207ENST00000508538 MEGF8Q7Z7M0 2845 aa1.18□□□□□ -2.22
CCDC110-207ENST00000508538 LYNX1G3V0Z9 82 aa1.17□□□□□ -2.22
CCDC110-207ENST00000508538 ALMS1Q8TCU4 4167 aa1.16□□□□□ -2.22
CCDC110-207ENST00000508538 H0YAA0 97 aa1.16□□□□□ -2.22
CCDC110-207ENST00000508538 KLK9Q2XQG4 91 aa1.16□□□□□ -2.22
CCDC110-207ENST00000508538 SPINK6Q6UWN8 80 aa1.15□□□□□ -2.23
CCDC110-207ENST00000508538 DEFB109BQ30KR1 87 aa1.14□□□□□ -2.23
CCDC110-207ENST00000508538 KRTAP5-10Q6L8G5 202 aa1.14□□□□□ -2.23
CCDC110-207ENST00000508538 SMIM2Q9BVW6 85 aa1.13□□□□□ -2.23
CCDC110-207ENST00000508538 SPTBN1Q01082 2364 aaKnown RBP1.12□□□□□ -2.23
CCDC110-207ENST00000508538 POLQO75417 2590 aa1.12□□□□□ -2.23
CCDC110-207ENST00000508538 PDE4DIPQ5VU43 2346 aa1.12□□□□□ -2.23
CCDC110-207ENST00000508538 F8P00451 2351 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms