RNA–Protein interactions for RNA: ENST00000508538.1

CCDC110-207, Transcript of coiled-coil domain containing 110, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC110, Length 467 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC110-207ENST00000508538 AEBP2Q6ZN18 517 aaPredicted RBP30.97■■■□□ 2.55
CCDC110-207ENST00000508538 CHIC1Q5VXU3 224 aa29.23■■■□□ 2.27
CCDC110-207ENST00000508538 SENP3Q9H4L4 574 aaPredicted RBP26.44■■□□□ 1.82
CCDC110-207ENST00000508538 PHF23Q9BUL5 403 aaPredicted RBP26.11■■□□□ 1.77
CCDC110-207ENST00000508538 FOXD1Q16676 465 aa24.68■■□□□ 1.54
CCDC110-207ENST00000508538 PLPPR3Q6T4P5 718 aa23.27■■□□□ 1.32
CCDC110-207ENST00000508538 MSH5O43196 834 aa23.16■■□□□ 1.3
CCDC110-207ENST00000508538 PIAS4Q8N2W9 510 aaPredicted RBP23.01■■□□□ 1.27
CCDC110-207ENST00000508538 PPP6R1Q9UPN7 881 aa22.96■■□□□ 1.27
CCDC110-207ENST00000508538 POTEDQ86YR6 584 aa22.93■■□□□ 1.26
CCDC110-207ENST00000508538 ADRA2BP18089 450 aa22.88■■□□□ 1.25
CCDC110-207ENST00000508538 MAPK8IP2Q13387 824 aaPredicted RBP21.08■□□□□ 0.97
CCDC110-207ENST00000508538 SCAF1Q9H7N4 1312 aaKnown RBP20.94■□□□□ 0.94
CCDC110-207ENST00000508538 DMRT2Q9Y5R5 561 aa20.93■□□□□ 0.94
CCDC110-207ENST00000508538 PPP4R3CPQ6ZMV5 832 aa20.39■□□□□ 0.85
CCDC110-207ENST00000508538 DCAF8L1A6NGE4 600 aa20.12■□□□□ 0.81
CCDC110-207ENST00000508538 HOXD11P31277 338 aaPredicted RBP20.1■□□□□ 0.81
CCDC110-207ENST00000508538 CNKSR2Q8WXI2 1034 aa20.05■□□□□ 0.8
CCDC110-207ENST00000508538 CACNB1Q02641 598 aaPredicted RBP20.02■□□□□ 0.8
CCDC110-207ENST00000508538 RNF216Q9NWF9 866 aaPredicted RBP19.9■□□□□ 0.78
CCDC110-207ENST00000508538 RNF39Q9H2S5 420 aa19.74■□□□□ 0.75
CCDC110-207ENST00000508538 NCBP3Q53F19 620 aaKnown RBP19.55■□□□□ 0.72
CCDC110-207ENST00000508538 C1QBPQ07021 282 aaKnown RBP19.45■□□□□ 0.7
CCDC110-207ENST00000508538 DNAJC5BQ9UF47 199 aa19.43■□□□□ 0.7
CCDC110-207ENST00000508538 NPM3O75607 178 aaKnown RBP19.25■□□□□ 0.67
CCDC110-207ENST00000508538 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.17■□□□□ 0.66
CCDC110-207ENST00000508538 KCNA4P22459 653 aa18.73■□□□□ 0.59
CCDC110-207ENST00000508538 U3KPZ7 1027 aaPredicted RBP18.72■□□□□ 0.59
CCDC110-207ENST00000508538 SPINK5Q9NQ38 1064 aaPredicted RBP18.53■□□□□ 0.56
CCDC110-207ENST00000508538 CAPN15O75808 1086 aa18.51■□□□□ 0.55
CCDC110-207ENST00000508538 SLC4A2P04920 1241 aa18.44■□□□□ 0.54
CCDC110-207ENST00000508538 DSG3P32926 999 aa18.44■□□□□ 0.54
CCDC110-207ENST00000508538 TRHP20396 242 aaPredicted RBP18.18■□□□□ 0.5
CCDC110-207ENST00000508538 APLP2Q06481 763 aa18.18■□□□□ 0.5
CCDC110-207ENST00000508538 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.13■□□□□ 0.49
CCDC110-207ENST00000508538 HNRNPUL2Q1KMD3 747 aaKnown RBP18.13■□□□□ 0.49
CCDC110-207ENST00000508538 ZNF219Q9P2Y4 722 aaPredicted RBP18.11■□□□□ 0.49
CCDC110-207ENST00000508538 ABCB7O75027 752 aa18.06■□□□□ 0.48
CCDC110-207ENST00000508538 SAMD1Q6SPF0 538 aaPredicted RBP18.02■□□□□ 0.48
CCDC110-207ENST00000508538 POTEHQ6S545 545 aa17.94■□□□□ 0.46
CCDC110-207ENST00000508538 MYCNP04198 464 aaPredicted RBP17.8■□□□□ 0.44
CCDC110-207ENST00000508538 POLA2Q14181 598 aa17.66■□□□□ 0.42
CCDC110-207ENST00000508538 SLC4A1APQ9BWU0 796 aaKnown RBP17.64■□□□□ 0.41
CCDC110-207ENST00000508538 RBM42Q9BTD8 480 aaKnown RBP17.58■□□□□ 0.4
CCDC110-207ENST00000508538 FOXD4L1Q9NU39 408 aa17.51■□□□□ 0.39
CCDC110-207ENST00000508538 ATF5Q9Y2D1 282 aaPredicted RBP17.43■□□□□ 0.38
CCDC110-207ENST00000508538 CHRDL2Q6WN34 429 aa17.28■□□□□ 0.36
CCDC110-207ENST00000508538 ZBTB12Q9Y330 459 aaPredicted RBP17.23■□□□□ 0.35
CCDC110-207ENST00000508538 ZBTB22O15209 634 aa17.19■□□□□ 0.34
CCDC110-207ENST00000508538 AKT1S1Q96B36 256 aa17.16■□□□□ 0.34
CCDC110-207ENST00000508538 OSCARQ8IYS5 282 aa17.05■□□□□ 0.32
CCDC110-207ENST00000508538 ATXN8OSP0DMR3 200 aa17.01■□□□□ 0.31
CCDC110-207ENST00000508538 REM2Q8IYK8 340 aaPredicted RBP17.01■□□□□ 0.31
CCDC110-207ENST00000508538 PIP4P2Q8N4L2 257 aa16.83■□□□□ 0.28
CCDC110-207ENST00000508538 PITPNM1O00562 1244 aa16.8■□□□□ 0.28
CCDC110-207ENST00000508538 FBLN2P98095 1184 aa16.76■□□□□ 0.27
CCDC110-207ENST00000508538 SP7Q8TDD2 431 aaPredicted RBP16.72■□□□□ 0.27
CCDC110-207ENST00000508538 FXR2P51116 673 aaKnown RBP eCLIP16.71■□□□□ 0.27
CCDC110-207ENST00000508538 SPDYE2BA6NHP3 402 aa16.7■□□□□ 0.26
CCDC110-207ENST00000508538 SPDYE6P0CI01 402 aa16.7■□□□□ 0.26
CCDC110-207ENST00000508538 SPDYE2Q495Y8 402 aa16.7■□□□□ 0.26
CCDC110-207ENST00000508538 HAX1O00165 279 aa16.62■□□□□ 0.25
CCDC110-207ENST00000508538 MKRN4PQ13434 485 aaPredicted RBP16.6■□□□□ 0.25
CCDC110-207ENST00000508538 ZNF692Q9BU19 519 aaPredicted RBP16.51■□□□□ 0.23
CCDC110-207ENST00000508538 SPDYE1Q8NFV5 336 aaPredicted RBP16.47■□□□□ 0.23
CCDC110-207ENST00000508538 CLEC11AQ9Y240 323 aa16.47■□□□□ 0.23
CCDC110-207ENST00000508538 SSUH2Q9Y2M2 353 aa16.44■□□□□ 0.22
CCDC110-207ENST00000508538 EVX2Q03828 476 aa16.39■□□□□ 0.21
CCDC110-207ENST00000508538 PRKAR2AP13861 404 aaKnown RBP16.38■□□□□ 0.21
CCDC110-207ENST00000508538 CSRNP3Q8WYN3 585 aa16.27■□□□□ 0.2
CCDC110-207ENST00000508538 PABPN1Q86U42 306 aaKnown RBP eCLIP16.24■□□□□ 0.19
CCDC110-207ENST00000508538 C19orf67A6NJJ6 358 aa16.18■□□□□ 0.18
CCDC110-207ENST00000508538 PRR29P0C7W0 189 aa16.18■□□□□ 0.18
CCDC110-207ENST00000508538 CHADLQ6NUI6 762 aa16.17■□□□□ 0.18
CCDC110-207ENST00000508538 GABBR2O75899 941 aa16.01■□□□□ 0.15
CCDC110-207ENST00000508538 EHMT2Q96KQ7 1210 aa15.93■□□□□ 0.14
CCDC110-207ENST00000508538 FARP1Q9Y4F1 1045 aaPredicted RBP15.91■□□□□ 0.14
CCDC110-207ENST00000508538 CD44P16070 742 aaKnown RBP15.84■□□□□ 0.13
CCDC110-207ENST00000508538 STAG3Q9UJ98 1225 aa15.76■□□□□ 0.11
CCDC110-207ENST00000508538 SPDYE4A6NLX3 237 aa15.74■□□□□ 0.11
CCDC110-207ENST00000508538 LHX8Q68G74 356 aa15.71■□□□□ 0.11
CCDC110-207ENST00000508538 CREBZFQ9NS37 354 aa15.71■□□□□ 0.11
CCDC110-207ENST00000508538 CLCN6P51797 869 aa15.69■□□□□ 0.1
CCDC110-207ENST00000508538 POTEIP0CG38 1075 aa15.66■□□□□ 0.1
CCDC110-207ENST00000508538 ZRANB1Q9UGI0 708 aa15.61■□□□□ 0.09
CCDC110-207ENST00000508538 ZNF579Q8NAF0 562 aaKnown RBP15.57■□□□□ 0.08
CCDC110-207ENST00000508538 DCBLD2Q96PD2 775 aa15.54■□□□□ 0.08
CCDC110-207ENST00000508538 PAK3O75914 559 aaPredicted RBP15.43■□□□□ 0.06
CCDC110-207ENST00000508538 NPM1P06748 294 aaKnown RBP eCLIP15.43■□□□□ 0.06
CCDC110-207ENST00000508538 GALR2O43603 387 aaPredicted RBP15.42■□□□□ 0.06
CCDC110-207ENST00000508538 MNX1P50219 401 aaPredicted RBP15.41■□□□□ 0.06
CCDC110-207ENST00000508538 PHF12Q96QT6 1004 aa15.36■□□□□ 0.05
CCDC110-207ENST00000508538 PROM2Q8N271 834 aa15.29■□□□□ 0.04
CCDC110-207ENST00000508538 PELP1Q8IZL8 1130 aaKnown RBP15.16■□□□□ 0.02
CCDC110-207ENST00000508538 TSPYL2Q9H2G4 693 aaPredicted RBP15.15■□□□□ 0.02
CCDC110-207ENST00000508538 POTEB2H3BUK9 544 aa15.14■□□□□ 0.01
CCDC110-207ENST00000508538 MS4A3Q96HJ5 214 aa15.14■□□□□ 0.01
CCDC110-207ENST00000508538 OTUD5Q96G74 571 aa15.12■□□□□ 0.01
CCDC110-207ENST00000508538 ASTLQ6HA08 431 aaPredicted RBP15.08■□□□□ 0
CCDC110-207ENST00000508538 MIER1Q8N108 512 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 135.4 ms