RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 A8MU10 97 aa3.11□□□□□ -1.91
PDLIM5-211ENST00000508531 K7EQD1 137 aa3.11□□□□□ -1.91
PDLIM5-211ENST00000508531 IGHV3-53P01767 116 aa3.11□□□□□ -1.91
PDLIM5-211ENST00000508531 LINC00158P58513 81 aa3.11□□□□□ -1.91
PDLIM5-211ENST00000508531 LINC00242Q5T6M2 205 aa3.11□□□□□ -1.91
PDLIM5-211ENST00000508531 CLEC19AQ6UXS0 136 aa3.11□□□□□ -1.91
PDLIM5-211ENST00000508531 SOSTDC1Q6X4U4 206 aa3.11□□□□□ -1.91
PDLIM5-211ENST00000508531 NTM-AS1Q6ZSK4 140 aa3.11□□□□□ -1.91
PDLIM5-211ENST00000508531 Q8N377 158 aa3.11□□□□□ -1.91
PDLIM5-211ENST00000508531 LINC00337Q8N6G1 96 aa3.11□□□□□ -1.91
PDLIM5-211ENST00000508531 LINC00467Q9BRT7 94 aa3.11□□□□□ -1.91
PDLIM5-211ENST00000508531 CHCHD7Q9BUK0 85 aa3.11□□□□□ -1.91
PDLIM5-211ENST00000508531 BPESC1Q9GZL8 116 aa3.11□□□□□ -1.91
PDLIM5-211ENST00000508531 ARFGEF3Q5TH69 2177 aa3.11□□□□□ -1.91
PDLIM5-211ENST00000508531 PRKDCP78527 4128 aaKnown RBP3.11□□□□□ -1.91
PDLIM5-211ENST00000508531 LY6HO94772 140 aa3.1□□□□□ -1.91
PDLIM5-211ENST00000508531 IGF1P05019 195 aa3.1□□□□□ -1.91
PDLIM5-211ENST00000508531 NDPQ00604 133 aa3.1□□□□□ -1.91
PDLIM5-211ENST00000508531 LYPD2Q6UXB3 125 aa3.1□□□□□ -1.91
PDLIM5-211ENST00000508531 CCL19Q99731 98 aa3.1□□□□□ -1.91
PDLIM5-211ENST00000508531 RBM12B-AS1Q9P1G2 102 aa3.1□□□□□ -1.91
PDLIM5-211ENST00000508531 S4R3C0 116 aa3.1□□□□□ -1.91
PDLIM5-211ENST00000508531 MALRD1Q5VYJ5 2156 aa3.1□□□□□ -1.91
PDLIM5-211ENST00000508531 IGKV2-28A0A075B6P5 120 aa3.09□□□□□ -1.91
PDLIM5-211ENST00000508531 TRBV6-8A0A0A6YYG3 113 aa3.09□□□□□ -1.91
PDLIM5-211ENST00000508531 IGHV3-35A0A0C4DH35 117 aa3.09□□□□□ -1.91
PDLIM5-211ENST00000508531 LOC100131303A0A0U1RQF7 123 aa3.09□□□□□ -1.91
PDLIM5-211ENST00000508531 CCL24O00175 119 aa3.09□□□□□ -1.91
PDLIM5-211ENST00000508531 IGKV2D-28P01615 120 aa3.09□□□□□ -1.91
PDLIM5-211ENST00000508531 IGHV3-23P01764 117 aa3.09□□□□□ -1.91
PDLIM5-211ENST00000508531 APOC4P55056 127 aa3.09□□□□□ -1.91
PDLIM5-211ENST00000508531 CCL18P55774 89 aa3.09□□□□□ -1.91
PDLIM5-211ENST00000508531 ASB16-AS1Q495Z4 193 aa3.09□□□□□ -1.91
PDLIM5-211ENST00000508531 UNQ9165/PRO28630Q6UXU0 137 aa3.09□□□□□ -1.91
PDLIM5-211ENST00000508531 C7orf65Q6ZTY9 151 aa3.09□□□□□ -1.91
PDLIM5-211ENST00000508531 LCA10Q71F78 164 aa3.09□□□□□ -1.91
PDLIM5-211ENST00000508531 OCR1Q9BZK8 76 aa3.09□□□□□ -1.91
PDLIM5-211ENST00000508531 LINC00588Q9Y4M8 146 aa3.09□□□□□ -1.91
PDLIM5-211ENST00000508531 BIRC6Q9NR09 4857 aa3.09□□□□□ -1.91
PDLIM5-211ENST00000508531 CADP27708 2225 aa3.08□□□□□ -1.92
PDLIM5-211ENST00000508531 IGHV3OR16-12A0A075B7B8 117 aa3.08□□□□□ -1.92
PDLIM5-211ENST00000508531 TRAV10A0A0B4J240 114 aa3.08□□□□□ -1.92
PDLIM5-211ENST00000508531 TRAV22A0A0B4J277 110 aa3.08□□□□□ -1.92
PDLIM5-211ENST00000508531 IGHV3-38A0A0C4DH36 116 aa3.08□□□□□ -1.92
PDLIM5-211ENST00000508531 IGHV3-66A0A0C4DH42 116 aa3.08□□□□□ -1.92
PDLIM5-211ENST00000508531 LCE6AA0A183 80 aa3.08□□□□□ -1.92
PDLIM5-211ENST00000508531 H3BPC8 53 aa3.08□□□□□ -1.92
PDLIM5-211ENST00000508531 M0R378 163 aa3.08□□□□□ -1.92
PDLIM5-211ENST00000508531 ZNF73O43830 326 aaPredicted RBP3.08□□□□□ -1.92
PDLIM5-211ENST00000508531 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.08□□□□□ -1.92
PDLIM5-211ENST00000508531 Q6ZRP5 223 aa3.08□□□□□ -1.92
PDLIM5-211ENST00000508531 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.08□□□□□ -1.92
PDLIM5-211ENST00000508531 Q8N9W7 124 aa3.08□□□□□ -1.92
PDLIM5-211ENST00000508531 WFDC9Q8NEX5 89 aa3.08□□□□□ -1.92
PDLIM5-211ENST00000508531 FAM104AQ969W3 186 aa3.08□□□□□ -1.92
PDLIM5-211ENST00000508531 RHPN1-AS1Q9BWJ2 59 aa3.08□□□□□ -1.92
PDLIM5-211ENST00000508531 EPPK1P58107 5090 aaKnown RBP3.08□□□□□ -1.92
PDLIM5-211ENST00000508531 ROS1P08922 2347 aa3.07□□□□□ -1.92
PDLIM5-211ENST00000508531 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.07□□□□□ -1.92
PDLIM5-211ENST00000508531 IGHV4-31P0DP07 118 aa3.07□□□□□ -1.92
PDLIM5-211ENST00000508531 COX7BP24311 80 aa3.07□□□□□ -1.92
PDLIM5-211ENST00000508531 LINC00575Q6W349 94 aa3.07□□□□□ -1.92
PDLIM5-211ENST00000508531 LINC00269Q8N2A0 174 aa3.07□□□□□ -1.92
PDLIM5-211ENST00000508531 NKAPP1Q8N9T2 125 aa3.07□□□□□ -1.92
PDLIM5-211ENST00000508531 SPANXA2-OT1Q8N9U9 137 aa3.07□□□□□ -1.92
PDLIM5-211ENST00000508531 C11orf72Q8NBR9 251 aa3.07□□□□□ -1.92
PDLIM5-211ENST00000508531 DIRC1Q969H9 104 aa3.07□□□□□ -1.92
PDLIM5-211ENST00000508531 CDC42SE2Q9NRR3 84 aa3.07□□□□□ -1.92
PDLIM5-211ENST00000508531 FAM215AQ9Y5M1 114 aa3.07□□□□□ -1.92
PDLIM5-211ENST00000508531 CMYA5Q8N3K9 4069 aa3.07□□□□□ -1.92
PDLIM5-211ENST00000508531 TENM1Q9UKZ4 2725 aa3.07□□□□□ -1.92
PDLIM5-211ENST00000508531 CR1P17927 2039 aa3.07□□□□□ -1.92
PDLIM5-211ENST00000508531 IGHV3OR16-13A0A075B7E8 117 aa3.06□□□□□ -1.92
PDLIM5-211ENST00000508531 IGHV3-74A0A0B4J1X5 117 aa3.06□□□□□ -1.92
PDLIM5-211ENST00000508531 PRB4P10163 310 aaPredicted RBP3.06□□□□□ -1.92
PDLIM5-211ENST00000508531 SYCNQ0VAF6 134 aa3.06□□□□□ -1.92
PDLIM5-211ENST00000508531 C9orf129Q5T035 196 aaKnown RBP3.06□□□□□ -1.92
PDLIM5-211ENST00000508531 Q8IZM0 81 aa3.06□□□□□ -1.92
PDLIM5-211ENST00000508531 UBE2E2Q96LR5 201 aa3.06□□□□□ -1.92
PDLIM5-211ENST00000508531 Q9BRP9 147 aa3.06□□□□□ -1.92
PDLIM5-211ENST00000508531 IGHV3OR16-8A0A075B7F1 116 aa3.05□□□□□ -1.92
PDLIM5-211ENST00000508531 IGHV3-49A0A0A0MS15 119 aa3.05□□□□□ -1.92
PDLIM5-211ENST00000508531 CHKB-CPT1BH3BT56 60 aa3.05□□□□□ -1.92
PDLIM5-211ENST00000508531 K7EQG2 157 aa3.05□□□□□ -1.92
PDLIM5-211ENST00000508531 PSCAO43653 123 aa3.05□□□□□ -1.92
PDLIM5-211ENST00000508531 KRTAP1-4P0C5Y4 121 aa3.05□□□□□ -1.92
PDLIM5-211ENST00000508531 MP68P56378 58 aa3.05□□□□□ -1.92
PDLIM5-211ENST00000508531 BSPH1Q075Z2 132 aa3.05□□□□□ -1.92
PDLIM5-211ENST00000508531 FAM229BQ4G0N7 80 aa3.05□□□□□ -1.92
PDLIM5-211ENST00000508531 HIGD2BQ4VC39 106 aa3.05□□□□□ -1.92
PDLIM5-211ENST00000508531 RNASE13Q5GAN3 156 aaKnown RBP3.05□□□□□ -1.92
PDLIM5-211ENST00000508531 Q6ZR54 194 aa3.05□□□□□ -1.92
PDLIM5-211ENST00000508531 Q8NBF4 154 aa3.05□□□□□ -1.92
PDLIM5-211ENST00000508531 C1orf64Q8NEQ6 169 aa3.05□□□□□ -1.92
PDLIM5-211ENST00000508531 MUC4Q99102 2169 aa3.05□□□□□ -1.92
PDLIM5-211ENST00000508531 PLXNB1O43157 2135 aa3.05□□□□□ -1.92
PDLIM5-211ENST00000508531 ETDCA0A1B0GVM5 59 aa3.04□□□□□ -1.92
PDLIM5-211ENST00000508531 A8MTW9 85 aa3.04□□□□□ -1.92
PDLIM5-211ENST00000508531 COX6A2Q02221 97 aa3.04□□□□□ -1.92
PDLIM5-211ENST00000508531 KRTAP5-2Q701N4 177 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms