RNA–Protein interactions for RNA: ENST00000507476.5

LINC01088-203, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3 BASIC

Gene LINC01088, Length 785 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-203ENST00000507476 DOPEY2Q9Y3R5 2298 aa1.29□□□□□ -2.2
LINC01088-203ENST00000507476 DEFB105AQ8NG35 78 aa1.28□□□□□ -2.2
LINC01088-203ENST00000507476 SYCP2Q9BX26 1530 aa1.28□□□□□ -2.2
LINC01088-203ENST00000507476 RNF17Q9BXT8 1623 aaKnown RBP1.28□□□□□ -2.2
LINC01088-203ENST00000507476 ZNF462Q96JM2 2506 aa1.27□□□□□ -2.21
LINC01088-203ENST00000507476 PLCE1Q9P212 2302 aa1.27□□□□□ -2.21
LINC01088-203ENST00000507476 LY75O60449 1722 aa1.27□□□□□ -2.21
LINC01088-203ENST00000507476 SPRR1BP22528 89 aa1.27□□□□□ -2.21
LINC01088-203ENST00000507476 UNC79Q9P2D8 2635 aa1.27□□□□□ -2.21
LINC01088-203ENST00000507476 CROCC2H7BZ55 1655 aa1.26□□□□□ -2.21
LINC01088-203ENST00000507476 C3P01024 1663 aa1.26□□□□□ -2.21
LINC01088-203ENST00000507476 KIF1AQ12756 1690 aa1.26□□□□□ -2.21
LINC01088-203ENST00000507476 PIEZO2Q9H5I5 2752 aa1.26□□□□□ -2.21
LINC01088-203ENST00000507476 SPRR1AP35321 89 aa1.26□□□□□ -2.21
LINC01088-203ENST00000507476 DEFB114Q30KQ6 69 aa1.26□□□□□ -2.21
LINC01088-203ENST00000507476 SPINK6Q6UWN8 80 aa1.26□□□□□ -2.21
LINC01088-203ENST00000507476 TJP1Q07157 1748 aa1.26□□□□□ -2.21
LINC01088-203ENST00000507476 CACNA1HO95180 2353 aa1.26□□□□□ -2.21
LINC01088-203ENST00000507476 TNCP24821 2201 aa1.25□□□□□ -2.21
LINC01088-203ENST00000507476 CPS1P31327 1500 aa1.25□□□□□ -2.21
LINC01088-203ENST00000507476 CACNA1AO00555 2505 aa1.25□□□□□ -2.21
LINC01088-203ENST00000507476 FCER1GP30273 86 aa1.25□□□□□ -2.21
LINC01088-203ENST00000507476 KRTAP5-10Q6L8G5 202 aa1.25□□□□□ -2.21
LINC01088-203ENST00000507476 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.24□□□□□ -2.21
LINC01088-203ENST00000507476 DEFB131BA0A096LNP1 70 aa1.24□□□□□ -2.21
LINC01088-203ENST00000507476 PRO3102Q9H379 93 aa1.24□□□□□ -2.21
LINC01088-203ENST00000507476 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
LINC01088-203ENST00000507476 C2CD3Q4AC94 2353 aa1.23□□□□□ -2.21
LINC01088-203ENST00000507476 ITSN2Q9NZM3 1697 aa1.23□□□□□ -2.21
LINC01088-203ENST00000507476 ETDCA0A1B0GVM5 59 aa1.23□□□□□ -2.21
LINC01088-203ENST00000507476 SERF2P84101 59 aa1.23□□□□□ -2.21
LINC01088-203ENST00000507476 CNOT1A5YKK6 2376 aaKnown RBP1.23□□□□□ -2.21
LINC01088-203ENST00000507476 PTPRZ1P23471 2315 aaPredicted RBP1.23□□□□□ -2.21
LINC01088-203ENST00000507476 MROH2AA6NES4 1674 aa1.23□□□□□ -2.21
LINC01088-203ENST00000507476 NDUFA3O95167 84 aa1.22□□□□□ -2.21
LINC01088-203ENST00000507476 DEFB109BQ30KR1 87 aa1.22□□□□□ -2.21
LINC01088-203ENST00000507476 SPTBN2O15020 2390 aa1.21□□□□□ -2.22
LINC01088-203ENST00000507476 CLASP1Q7Z460 1538 aa1.21□□□□□ -2.22
LINC01088-203ENST00000507476 H1FX-AS1Q4G0G2 97 aa1.21□□□□□ -2.22
LINC01088-203ENST00000507476 NCBP2-AS2Q69YL0 99 aa1.21□□□□□ -2.22
LINC01088-203ENST00000507476 NMES1Q9C002 83 aa1.21□□□□□ -2.22
LINC01088-203ENST00000507476 USF3Q68DE3 2245 aa1.21□□□□□ -2.22
LINC01088-203ENST00000507476 PTPRQQ9UMZ3 2332 aa1.21□□□□□ -2.22
LINC01088-203ENST00000507476 UGGT1Q9NYU2 1555 aa1.21□□□□□ -2.22
LINC01088-203ENST00000507476 TTC28Q96AY4 2481 aa1.2□□□□□ -2.22
LINC01088-203ENST00000507476 PKD1L2Q7Z442 2459 aa1.2□□□□□ -2.22
LINC01088-203ENST00000507476 FANCD2Q9BXW9 1451 aa1.19□□□□□ -2.22
LINC01088-203ENST00000507476 K7EMI3 77 aa1.19□□□□□ -2.22
LINC01088-203ENST00000507476 SPINK1P00995 79 aa1.19□□□□□ -2.22
LINC01088-203ENST00000507476 LINC00158P58513 81 aa1.18□□□□□ -2.22
LINC01088-203ENST00000507476 KLK9Q2XQG4 91 aa1.18□□□□□ -2.22
LINC01088-203ENST00000507476 WFDC13Q8IUB5 93 aa1.18□□□□□ -2.22
LINC01088-203ENST00000507476 ADCY10Q96PN6 1610 aa1.18□□□□□ -2.22
LINC01088-203ENST00000507476 POLQO75417 2590 aa1.16□□□□□ -2.22
LINC01088-203ENST00000507476 C4AP0C0L4 1744 aa1.16□□□□□ -2.22
LINC01088-203ENST00000507476 C4BP0C0L5 1744 aa1.16□□□□□ -2.22
LINC01088-203ENST00000507476 A0A0C4DFX4 3053 aa1.15□□□□□ -2.22
LINC01088-203ENST00000507476 MEGF8Q7Z7M0 2845 aa1.15□□□□□ -2.23
LINC01088-203ENST00000507476 DEPDC5O75140 1603 aa1.15□□□□□ -2.23
LINC01088-203ENST00000507476 PCNTO95613 3336 aa1.14□□□□□ -2.23
LINC01088-203ENST00000507476 SNRPGP15A8MWD9 76 aa1.13□□□□□ -2.23
LINC01088-203ENST00000507476 M0R1W7 72 aa1.13□□□□□ -2.23
LINC01088-203ENST00000507476 CRIP1P50238 77 aa1.12□□□□□ -2.23
LINC01088-203ENST00000507476 LELP1Q5T871 98 aa1.12□□□□□ -2.23
LINC01088-203ENST00000507476 F8P00451 2351 aa1.12□□□□□ -2.23
LINC01088-203ENST00000507476 SPTBN1Q01082 2364 aaKnown RBP1.12□□□□□ -2.23
LINC01088-203ENST00000507476 ZNF292O60281 2723 aa1.11□□□□□ -2.23
LINC01088-203ENST00000507476 BPTFQ12830 3046 aa1.1□□□□□ -2.23
LINC01088-203ENST00000507476 KIAA0586Q9BVV6 1533 aa1.1□□□□□ -2.23
LINC01088-203ENST00000507476 LOC730098B7Z3J9 87 aa1.1□□□□□ -2.23
LINC01088-203ENST00000507476 ABCA12Q86UK0 2595 aa1.1□□□□□ -2.23
LINC01088-203ENST00000507476 ANKRD36CQ5JPF3 1778 aa1.09□□□□□ -2.23
LINC01088-203ENST00000507476 IGIPA6NJ69 53 aa1.09□□□□□ -2.23
LINC01088-203ENST00000507476 H0YAA0 97 aa1.09□□□□□ -2.23
LINC01088-203ENST00000507476 ABCC8Q09428 1581 aa1.08□□□□□ -2.24
LINC01088-203ENST00000507476 NRXN3Q9Y4C0 1643 aa1.08□□□□□ -2.24
LINC01088-203ENST00000507476 LYNX1G3V0Z9 82 aa1.08□□□□□ -2.24
LINC01088-203ENST00000507476 TNRC18O15417 2968 aaPredicted RBP1.08□□□□□ -2.24
LINC01088-203ENST00000507476 EFCAB6Q5THR3 1501 aa1.08□□□□□ -2.24
LINC01088-203ENST00000507476 ZFHX4Q86UP3 3567 aa1.08□□□□□ -2.24
LINC01088-203ENST00000507476 UTRNP46939 3433 aa1.07□□□□□ -2.24
LINC01088-203ENST00000507476 A0A1B0GUL6 1792 aa1.07□□□□□ -2.24
LINC01088-203ENST00000507476 TRANK1O15050 2925 aa1.07□□□□□ -2.24
LINC01088-203ENST00000507476 CHD9Q3L8U1 2897 aa1.06□□□□□ -2.24
LINC01088-203ENST00000507476 BDP1A6H8Y1 2624 aa1.06□□□□□ -2.24
LINC01088-203ENST00000507476 GVINP1Q7Z2Y8 2422 aa1.06□□□□□ -2.24
LINC01088-203ENST00000507476 PLNP26678 52 aa1.06□□□□□ -2.24
LINC01088-203ENST00000507476 MINOS1Q5TGZ0 78 aa1.06□□□□□ -2.24
LINC01088-203ENST00000507476 CMC2Q9NRP2 79 aa1.06□□□□□ -2.24
LINC01088-203ENST00000507476 U3KQA8 63 aa1.06□□□□□ -2.24
LINC01088-203ENST00000507476 AGLP35573 1532 aa1.05□□□□□ -2.24
LINC01088-203ENST00000507476 ABCA5Q8WWZ7 1642 aa1.05□□□□□ -2.24
LINC01088-203ENST00000507476 CELSR2Q9HCU4 2923 aa1.05□□□□□ -2.24
LINC01088-203ENST00000507476 COL6A3P12111 3177 aa1.04□□□□□ -2.24
LINC01088-203ENST00000507476 KRTAP19-3Q7Z4W3 81 aa1.04□□□□□ -2.24
LINC01088-203ENST00000507476 SETXQ7Z333 2677 aaKnown RBP1.04□□□□□ -2.24
LINC01088-203ENST00000507476 LAMA2P24043 3122 aaKnown RBP1.04□□□□□ -2.24
LINC01088-203ENST00000507476 PIEZO1Q92508 2521 aa1.04□□□□□ -2.24
LINC01088-203ENST00000507476 IAPPP10997 89 aa1.03□□□□□ -2.24
LINC01088-203ENST00000507476 CHD8Q9HCK8 2581 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms