RNA–Protein interactions for RNA: ENST00000507292.1

SRPK1-208, Transcript of SRSF protein kinase 1, humanhuman

TSL 3

Gene SRPK1, Length 634 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-208ENST00000507292 LINC00467Q9BRT7 94 aa0.93□□□□□ -2.26
SRPK1-208ENST00000507292 NDUFA12Q9UI09 145 aa0.93□□□□□ -2.26
SRPK1-208ENST00000507292 UBE2D4Q9Y2X8 147 aa0.93□□□□□ -2.26
SRPK1-208ENST00000507292 ZNF469Q96JG9 3925 aaPredicted RBP0.93□□□□□ -2.26
SRPK1-208ENST00000507292 ROS1P08922 2347 aa0.93□□□□□ -2.26
SRPK1-208ENST00000507292 VPS13DQ5THJ4 4388 aa0.93□□□□□ -2.26
SRPK1-208ENST00000507292 FLNCQ14315 2725 aa0.93□□□□□ -2.26
SRPK1-208ENST00000507292 CR1P17927 2039 aa0.93□□□□□ -2.26
SRPK1-208ENST00000507292 EP300Q09472 2414 aaPredicted RBP0.93□□□□□ -2.26
SRPK1-208ENST00000507292 NF1P21359 2839 aa0.93□□□□□ -2.26
SRPK1-208ENST00000507292 FRAS1Q86XX4 4008 aa0.92□□□□□ -2.26
SRPK1-208ENST00000507292 UBR5O95071 2799 aaPredicted RBP0.92□□□□□ -2.26
SRPK1-208ENST00000507292 DNAH10Q8IVF4 4471 aa0.92□□□□□ -2.26
SRPK1-208ENST00000507292 RP1L1Q8IWN7 2480 aaPredicted RBP0.92□□□□□ -2.26
SRPK1-208ENST00000507292 CUBNO60494 3623 aa0.92□□□□□ -2.26
SRPK1-208ENST00000507292 HECTD4Q9Y4D8 3996 aa0.92□□□□□ -2.26
SRPK1-208ENST00000507292 LOC107984640A0A0U1RRK4 108 aa0.92□□□□□ -2.26
SRPK1-208ENST00000507292 H7C2G1 150 aa0.92□□□□□ -2.26
SRPK1-208ENST00000507292 BCE1O60756 84 aa0.92□□□□□ -2.26
SRPK1-208ENST00000507292 MSMBP08118 114 aa0.92□□□□□ -2.26
SRPK1-208ENST00000507292 MGPP08493 103 aa0.92□□□□□ -2.26
SRPK1-208ENST00000507292 S100A4P26447 101 aaKnown RBP0.92□□□□□ -2.26
SRPK1-208ENST00000507292 RPL28P46779 137 aaKnown RBP0.92□□□□□ -2.26
SRPK1-208ENST00000507292 DEFB1P60022 68 aa0.92□□□□□ -2.26
SRPK1-208ENST00000507292 ZNF56Q15929 161 aa0.92□□□□□ -2.26
SRPK1-208ENST00000507292 ATP5EP2Q5VTU8 51 aa0.92□□□□□ -2.26
SRPK1-208ENST00000507292 COA5Q86WW8 74 aa0.92□□□□□ -2.26
SRPK1-208ENST00000507292 SERP2Q8N6R1 65 aa0.92□□□□□ -2.26
SRPK1-208ENST00000507292 C3orf56Q8N813 242 aa0.92□□□□□ -2.26
SRPK1-208ENST00000507292 LINC00308Q8TCZ7 52 aa0.92□□□□□ -2.26
SRPK1-208ENST00000507292 DPH3Q96FX2 82 aa0.92□□□□□ -2.26
SRPK1-208ENST00000507292 DYNLRB1Q9NP97 96 aa0.92□□□□□ -2.26
SRPK1-208ENST00000507292 WNK2Q9Y3S1 2297 aa0.92□□□□□ -2.26
SRPK1-208ENST00000507292 CNOT1A5YKK6 2376 aaKnown RBP0.92□□□□□ -2.26
SRPK1-208ENST00000507292 CACNA1HO95180 2353 aa0.92□□□□□ -2.26
SRPK1-208ENST00000507292 MAP1BP46821 2468 aaKnown RBP0.92□□□□□ -2.26
SRPK1-208ENST00000507292 MED13LQ71F56 2210 aa0.92□□□□□ -2.26
SRPK1-208ENST00000507292 VWFP04275 2813 aa0.92□□□□□ -2.26
SRPK1-208ENST00000507292 APCP25054 2843 aa0.92□□□□□ -2.26
SRPK1-208ENST00000507292 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.92□□□□□ -2.267e-18■■■□□ 18.8
SRPK1-208ENST00000507292 PCNX1Q96RV3 2341 aa0.92□□□□□ -2.26
SRPK1-208ENST00000507292 SPTBN1Q01082 2364 aaKnown RBP0.91□□□□□ -2.26
SRPK1-208ENST00000507292 CENPEQ02224 2701 aa0.91□□□□□ -2.26
SRPK1-208ENST00000507292 DNAH8Q96JB1 4490 aa0.91□□□□□ -2.26
SRPK1-208ENST00000507292 TRAV7A0A075B6U4 112 aa0.91□□□□□ -2.26
SRPK1-208ENST00000507292 TRBV10-3A0A0K0K1G6 114 aa0.91□□□□□ -2.26
SRPK1-208ENST00000507292 hADV29S1A0JD25 119 aa0.91□□□□□ -2.26
SRPK1-208ENST00000507292 LYNX1G3V0Z9 82 aa0.91□□□□□ -2.26
SRPK1-208ENST00000507292 G3V318 75 aa0.91□□□□□ -2.26
SRPK1-208ENST00000507292 H7BZZ5 65 aa0.91□□□□□ -2.26
SRPK1-208ENST00000507292 NDUFC2O95298 119 aa0.91□□□□□ -2.26
SRPK1-208ENST00000507292 COX6CP09669 75 aa0.91□□□□□ -2.26
SRPK1-208ENST00000507292 LYNX1P0DP58 116 aa0.91□□□□□ -2.26
SRPK1-208ENST00000507292 KLKP1Q107X0 134 aa0.91□□□□□ -2.26
SRPK1-208ENST00000507292 TPRXLQ17RH7 258 aa0.91□□□□□ -2.26
SRPK1-208ENST00000507292 DEFB109BQ30KR1 87 aa0.91□□□□□ -2.26
SRPK1-208ENST00000507292 OR13C6PQ8NH95 151 aa0.91□□□□□ -2.26
SRPK1-208ENST00000507292 COPS9Q8WXC6 57 aa0.91□□□□□ -2.26
SRPK1-208ENST00000507292 USMG5Q96IX5 58 aa0.91□□□□□ -2.26
SRPK1-208ENST00000507292 DSCR8Q96T75 97 aa0.91□□□□□ -2.26
SRPK1-208ENST00000507292 LINC00846Q9NV44 126 aa0.91□□□□□ -2.26
SRPK1-208ENST00000507292 CDKN2A-AS1Q9UH64 79 aa0.91□□□□□ -2.26
SRPK1-208ENST00000507292 DNAH9Q9NYC9 4486 aa0.91□□□□□ -2.26
SRPK1-208ENST00000507292 ACACAQ13085 2346 aa0.9□□□□□ -2.26
SRPK1-208ENST00000507292 TENM1Q9UKZ4 2725 aa0.9□□□□□ -2.26
SRPK1-208ENST00000507292 TPRP12270 2363 aaKnown RBP0.9□□□□□ -2.27
SRPK1-208ENST00000507292 TRAV12-2A0A075B6T6 113 aa0.9□□□□□ -2.27
SRPK1-208ENST00000507292 A0A087WVE0 104 aa0.9□□□□□ -2.27
SRPK1-208ENST00000507292 LOC110117498A0A087WWA1 95 aa0.9□□□□□ -2.27
SRPK1-208ENST00000507292 A0A096LNT2 108 aa0.9□□□□□ -2.27
SRPK1-208ENST00000507292 TRAV13-2A0A0B4J235 113 aa0.9□□□□□ -2.27
SRPK1-208ENST00000507292 TRAV13-1A0A0B4J241 112 aa0.9□□□□□ -2.27
SRPK1-208ENST00000507292 TRAV12-3A0A0B4J271 114 aa0.9□□□□□ -2.27
SRPK1-208ENST00000507292 TRBV7-4A0A0J9YYF1 115 aa0.9□□□□□ -2.27
SRPK1-208ENST00000507292 TRBV10-1A0A0K0K1A3 114 aa0.9□□□□□ -2.27
SRPK1-208ENST00000507292 LCE6AA0A183 80 aa0.9□□□□□ -2.27
SRPK1-208ENST00000507292 FAM236DA0A1B0GTK5 79 aa0.9□□□□□ -2.27
SRPK1-208ENST00000507292 IBA57-AS1B1ANH7 110 aa0.9□□□□□ -2.27
SRPK1-208ENST00000507292 H0YGX0 51 aa0.9□□□□□ -2.27
SRPK1-208ENST00000507292 ERC2-IT1O76042 136 aa0.9□□□□□ -2.27
SRPK1-208ENST00000507292 DNAL4O96015 105 aa0.9□□□□□ -2.27
SRPK1-208ENST00000507292 CRPP02741 224 aa0.9□□□□□ -2.27
SRPK1-208ENST00000507292 CCKP06307 115 aa0.9□□□□□ -2.27
SRPK1-208ENST00000507292 BAALC-AS2P0C853 105 aa0.9□□□□□ -2.27
SRPK1-208ENST00000507292 FAM236CP0DP71 79 aa0.9□□□□□ -2.27
SRPK1-208ENST00000507292 ATP5EP56381 51 aaPredicted RBP0.9□□□□□ -2.27
SRPK1-208ENST00000507292 COX6A2Q02221 97 aa0.9□□□□□ -2.27
SRPK1-208ENST00000507292 FAM74A4Q5TZK3 123 aa0.9□□□□□ -2.27
SRPK1-208ENST00000507292 FP248Q71RG6 208 aaPredicted RBP0.9□□□□□ -2.27
SRPK1-208ENST00000507292 C1orf158Q8N1D5 194 aa0.9□□□□□ -2.27
SRPK1-208ENST00000507292 SMIM11BQ8TCY0 68 aa0.9□□□□□ -2.27
SRPK1-208ENST00000507292 C10orf105Q8TEF2 133 aa0.9□□□□□ -2.27
SRPK1-208ENST00000507292 RHPN1-AS1Q9BWJ2 59 aa0.9□□□□□ -2.27
SRPK1-208ENST00000507292 SERP1Q9Y6X1 66 aa0.9□□□□□ -2.27
SRPK1-208ENST00000507292 PTPRQQ9UMZ3 2332 aa0.9□□□□□ -2.27
SRPK1-208ENST00000507292 HIVEP3Q5T1R4 2406 aa0.9□□□□□ -2.27
SRPK1-208ENST00000507292 GVINP1Q7Z2Y8 2422 aa0.9□□□□□ -2.27
SRPK1-208ENST00000507292 TEX15Q9BXT5 2789 aa0.9□□□□□ -2.27
SRPK1-208ENST00000507292 HIVEP1P15822 2718 aa0.89□□□□□ -2.27
SRPK1-208ENST00000507292 NBEAL2Q6ZNJ1 2754 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms