RNA–Protein interactions for RNA: ENST00000507292.1

SRPK1-208, Transcript of SRSF protein kinase 1, humanhuman

TSL 3

Gene SRPK1, Length 634 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-208ENST00000507292 AEBP2Q6ZN18 517 aaPredicted RBP17.91■□□□□ 0.46
SRPK1-208ENST00000507292 CHIC1Q5VXU3 224 aa17■□□□□ 0.31
SRPK1-208ENST00000507292 SENP3Q9H4L4 574 aaPredicted RBP15.23■□□□□ 0.03
SRPK1-208ENST00000507292 PHF23Q9BUL5 403 aaPredicted RBP15.07■□□□□ 0
SRPK1-208ENST00000507292 POTEDQ86YR6 584 aa14.84□□□□□ -0.03
SRPK1-208ENST00000507292 FOXD1Q16676 465 aa14.23□□□□□ -0.13
SRPK1-208ENST00000507292 PLPPR3Q6T4P5 718 aa13.59□□□□□ -0.23
SRPK1-208ENST00000507292 MSH5O43196 834 aa13.38□□□□□ -0.27
SRPK1-208ENST00000507292 PPP6R1Q9UPN7 881 aa13.34□□□□□ -0.27
SRPK1-208ENST00000507292 ADRA2BP18089 450 aa13.32□□□□□ -0.28
SRPK1-208ENST00000507292 PIAS4Q8N2W9 510 aaPredicted RBP13.31□□□□□ -0.28
SRPK1-208ENST00000507292 MAPK8IP2Q13387 824 aaPredicted RBP12.23□□□□□ -0.45
SRPK1-208ENST00000507292 SCAF1Q9H7N4 1312 aaKnown RBP12.12□□□□□ -0.47
SRPK1-208ENST00000507292 CACNB1Q02641 598 aaPredicted RBP12.11□□□□□ -0.47
SRPK1-208ENST00000507292 DMRT2Q9Y5R5 561 aa12.08□□□□□ -0.48
SRPK1-208ENST00000507292 PPP4R3CPQ6ZMV5 832 aa11.94□□□□□ -0.5
SRPK1-208ENST00000507292 CNKSR2Q8WXI2 1034 aa11.69□□□□□ -0.54
SRPK1-208ENST00000507292 DCAF8L1A6NGE4 600 aa11.66□□□□□ -0.54
SRPK1-208ENST00000507292 HOXD11P31277 338 aaPredicted RBP11.64□□□□□ -0.55
SRPK1-208ENST00000507292 RNF216Q9NWF9 866 aaPredicted RBP11.57□□□□□ -0.56
SRPK1-208ENST00000507292 NCBP3Q53F19 620 aaKnown RBP11.47□□□□□ -0.57
SRPK1-208ENST00000507292 POTEHQ6S545 545 aa11.44□□□□□ -0.58
SRPK1-208ENST00000507292 NPM3O75607 178 aaKnown RBP11.33□□□□□ -0.6
SRPK1-208ENST00000507292 RNF39Q9H2S5 420 aa11.33□□□□□ -0.6
SRPK1-208ENST00000507292 DNAJC5BQ9UF47 199 aa11.18□□□□□ -0.62
SRPK1-208ENST00000507292 KCNA4P22459 653 aa11.16□□□□□ -0.62
SRPK1-208ENST00000507292 C1QBPQ07021 282 aaKnown RBP11.15□□□□□ -0.62
SRPK1-208ENST00000507292 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.14□□□□□ -0.636e-12■■■□□ 15.3
SRPK1-208ENST00000507292 U3KPZ7 1027 aaPredicted RBP10.9□□□□□ -0.66
SRPK1-208ENST00000507292 SLC4A2P04920 1241 aa10.81□□□□□ -0.68
SRPK1-208ENST00000507292 SPINK5Q9NQ38 1064 aaPredicted RBP10.75□□□□□ -0.69
SRPK1-208ENST00000507292 CAPN15O75808 1086 aa10.73□□□□□ -0.69
SRPK1-208ENST00000507292 DSG3P32926 999 aa10.63□□□□□ -0.71
SRPK1-208ENST00000507292 TRHP20396 242 aaPredicted RBP10.58□□□□□ -0.72
SRPK1-208ENST00000507292 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.55□□□□□ -0.72
SRPK1-208ENST00000507292 APLP2Q06481 763 aa10.55□□□□□ -0.72
SRPK1-208ENST00000507292 HNRNPUL2Q1KMD3 747 aaKnown RBP10.55□□□□□ -0.72
SRPK1-208ENST00000507292 SLC4A1APQ9BWU0 796 aaKnown RBP10.53□□□□□ -0.72
SRPK1-208ENST00000507292 ABCB7O75027 752 aa10.51□□□□□ -0.73
SRPK1-208ENST00000507292 SAMD1Q6SPF0 538 aaPredicted RBP10.51□□□□□ -0.73
SRPK1-208ENST00000507292 ZNF219Q9P2Y4 722 aaPredicted RBP10.5□□□□□ -0.73
SRPK1-208ENST00000507292 MYCNP04198 464 aaPredicted RBP10.46□□□□□ -0.73
SRPK1-208ENST00000507292 FOXD4L1Q9NU39 408 aa10.37□□□□□ -0.75
SRPK1-208ENST00000507292 POLA2Q14181 598 aa10.29□□□□□ -0.76
SRPK1-208ENST00000507292 ZBTB22O15209 634 aa10.27□□□□□ -0.77
SRPK1-208ENST00000507292 ATF5Q9Y2D1 282 aaPredicted RBP10.26□□□□□ -0.77
SRPK1-208ENST00000507292 SP7Q8TDD2 431 aaPredicted RBP10.22□□□□□ -0.77
SRPK1-208ENST00000507292 RBM42Q9BTD8 480 aaKnown RBP10.12□□□□□ -0.79
SRPK1-208ENST00000507292 ZBTB12Q9Y330 459 aaPredicted RBP10.03□□□□□ -0.8
SRPK1-208ENST00000507292 ATXN8OSP0DMR3 200 aa10.02□□□□□ -0.81
SRPK1-208ENST00000507292 CHRDL2Q6WN34 429 aa9.97□□□□□ -0.81
SRPK1-208ENST00000507292 OSCARQ8IYS5 282 aa9.95□□□□□ -0.82
SRPK1-208ENST00000507292 AKT1S1Q96B36 256 aa9.9□□□□□ -0.82
SRPK1-208ENST00000507292 PLSCR2Q9NRY7 297 aa9.87□□□□□ -0.83
SRPK1-208ENST00000507292 REM2Q8IYK8 340 aaPredicted RBP9.83□□□□□ -0.84
SRPK1-208ENST00000507292 FBLN2P98095 1184 aa9.82□□□□□ -0.84
SRPK1-208ENST00000507292 CSRNP3Q8WYN3 585 aa9.8□□□□□ -0.84
SRPK1-208ENST00000507292 MKRN4PQ13434 485 aaPredicted RBP9.78□□□□□ -0.84
SRPK1-208ENST00000507292 PITPNM1O00562 1244 aa9.74□□□□□ -0.85
SRPK1-208ENST00000507292 EHMT2Q96KQ7 1210 aa9.74□□□□□ -0.85
SRPK1-208ENST00000507292 SPDYE2BA6NHP3 402 aa9.73□□□□□ -0.85
SRPK1-208ENST00000507292 SPDYE6P0CI01 402 aa9.73□□□□□ -0.85
SRPK1-208ENST00000507292 SPDYE2Q495Y8 402 aa9.73□□□□□ -0.85
SRPK1-208ENST00000507292 PIP4P2Q8N4L2 257 aa9.69□□□□□ -0.86
SRPK1-208ENST00000507292 ZNF692Q9BU19 519 aaPredicted RBP9.66□□□□□ -0.86
SRPK1-208ENST00000507292 HAX1O00165 279 aa9.63□□□□□ -0.87
SRPK1-208ENST00000507292 FXR2P51116 673 aaKnown RBP eCLIP9.61□□□□□ -0.87
SRPK1-208ENST00000507292 SSUH2Q9Y2M2 353 aa9.61□□□□□ -0.87
SRPK1-208ENST00000507292 CLEC11AQ9Y240 323 aa9.6□□□□□ -0.87
SRPK1-208ENST00000507292 LHX8Q68G74 356 aa9.56□□□□□ -0.88
SRPK1-208ENST00000507292 SPDYE1Q8NFV5 336 aaPredicted RBP9.56□□□□□ -0.88
SRPK1-208ENST00000507292 PABPN1Q86U42 306 aaKnown RBP eCLIP9.52□□□□□ -0.89
SRPK1-208ENST00000507292 PRKAR2AP13861 404 aaKnown RBP9.49□□□□□ -0.89
SRPK1-208ENST00000507292 EVX2Q03828 476 aa9.42□□□□□ -0.9
SRPK1-208ENST00000507292 CHADLQ6NUI6 762 aa9.42□□□□□ -0.9
SRPK1-208ENST00000507292 PRR29P0C7W0 189 aa9.41□□□□□ -0.9
SRPK1-208ENST00000507292 SPDYE4A6NLX3 237 aa9.33□□□□□ -0.92
SRPK1-208ENST00000507292 C19orf67A6NJJ6 358 aa9.31□□□□□ -0.92
SRPK1-208ENST00000507292 FARP1Q9Y4F1 1045 aaPredicted RBP9.24□□□□□ -0.93
SRPK1-208ENST00000507292 STAG3Q9UJ98 1225 aa9.22□□□□□ -0.93
SRPK1-208ENST00000507292 GABBR2O75899 941 aa9.19□□□□□ -0.94
SRPK1-208ENST00000507292 CD44P16070 742 aaKnown RBP9.19□□□□□ -0.94
SRPK1-208ENST00000507292 CREBZFQ9NS37 354 aa9.18□□□□□ -0.94
SRPK1-208ENST00000507292 PCDH10Q9P2E7 1040 aa9.07□□□□□ -0.96
SRPK1-208ENST00000507292 ZRANB1Q9UGI0 708 aa9.07□□□□□ -0.96
SRPK1-208ENST00000507292 POTEMA6NI47 508 aa9.06□□□□□ -0.96
SRPK1-208ENST00000507292 PROM2Q8N271 834 aa9.06□□□□□ -0.96
SRPK1-208ENST00000507292 MNX1P50219 401 aaPredicted RBP9.02□□□□□ -0.97
SRPK1-208ENST00000507292 ZNF579Q8NAF0 562 aaKnown RBP9.02□□□□□ -0.97
SRPK1-208ENST00000507292 NPM1P06748 294 aaKnown RBP eCLIP9□□□□□ -0.97
SRPK1-208ENST00000507292 POTEIP0CG38 1075 aa9□□□□□ -0.97
SRPK1-208ENST00000507292 POTEGQ6S5H5 508 aa8.99□□□□□ -0.97
SRPK1-208ENST00000507292 PAK3O75914 559 aaPredicted RBP8.98□□□□□ -0.97
SRPK1-208ENST00000507292 CLCN6P51797 869 aa8.97□□□□□ -0.97
SRPK1-208ENST00000507292 PHF12Q96QT6 1004 aa8.96□□□□□ -0.98
SRPK1-208ENST00000507292 DCBLD2Q96PD2 775 aa8.95□□□□□ -0.98
SRPK1-208ENST00000507292 GALR2O43603 387 aaPredicted RBP8.94□□□□□ -0.98
SRPK1-208ENST00000507292 FKBP8Q14318 412 aa8.91□□□□□ -0.98
SRPK1-208ENST00000507292 MIER1Q8N108 512 aa8.91□□□□□ -0.98
SRPK1-208ENST00000507292 TSPYL2Q9H2G4 693 aaPredicted RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms