RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 IGHV3-30P01768 117 aa1.42□□□□□ -2.18
TOPBP1-205ENST00000506779 IGHV3-33P01772 117 aa1.42□□□□□ -2.18
TOPBP1-205ENST00000506779 SCGB1C2P0DMR2 95 aa1.42□□□□□ -2.18
TOPBP1-205ENST00000506779 IGHV3-30-5P0DP03 117 aa1.42□□□□□ -2.18
TOPBP1-205ENST00000506779 PSMB2P49721 201 aa1.42□□□□□ -2.18
TOPBP1-205ENST00000506779 LINC00158P58513 81 aa1.42□□□□□ -2.18
TOPBP1-205ENST00000506779 COX6A2Q02221 97 aa1.42□□□□□ -2.18
TOPBP1-205ENST00000506779 TTC32Q5I0X7 151 aa1.42□□□□□ -2.18
TOPBP1-205ENST00000506779 ENHOQ6UWT2 76 aa1.42□□□□□ -2.18
TOPBP1-205ENST00000506779 C5orf38Q86SI9 138 aa1.42□□□□□ -2.18
TOPBP1-205ENST00000506779 WFDC10BQ8IUB3 73 aa1.42□□□□□ -2.18
TOPBP1-205ENST00000506779 MUSTN1Q8IVN3 82 aa1.42□□□□□ -2.18
TOPBP1-205ENST00000506779 UBE2DNLQ8IWF7 75 aa1.42□□□□□ -2.18
TOPBP1-205ENST00000506779 ZNF625Q96I27 306 aaPredicted RBP1.42□□□□□ -2.18
TOPBP1-205ENST00000506779 NHP2Q9NX24 153 aaKnown RBP1.42□□□□□ -2.18
TOPBP1-205ENST00000506779 ERG28Q9UKR5 140 aa1.42□□□□□ -2.18
TOPBP1-205ENST00000506779 SONP18583 2426 aaKnown RBP1.42□□□□□ -2.18
TOPBP1-205ENST00000506779 ANK2Q01484 3957 aa1.42□□□□□ -2.18
TOPBP1-205ENST00000506779 RYR1P21817 5038 aa1.42□□□□□ -2.18
TOPBP1-205ENST00000506779 MUC4Q99102 2169 aa1.41□□□□□ -2.18
TOPBP1-205ENST00000506779 IGLV10-54A0A075B6I4 117 aa1.41□□□□□ -2.18
TOPBP1-205ENST00000506779 LOC107984156A0A0G2JMH3 177 aa1.41□□□□□ -2.18
TOPBP1-205ENST00000506779 TRBV30A0A0K0K1B3 111 aa1.41□□□□□ -2.18
TOPBP1-205ENST00000506779 A0A1B0GV90 55 aa1.41□□□□□ -2.18
TOPBP1-205ENST00000506779 A0A1W2PPM0 123 aa1.41□□□□□ -2.18
TOPBP1-205ENST00000506779 NDUFC2-KCTD14E9PQ53 114 aa1.41□□□□□ -2.18
TOPBP1-205ENST00000506779 F8W1H4 67 aa1.41□□□□□ -2.18
TOPBP1-205ENST00000506779 H0YGX0 51 aa1.41□□□□□ -2.18
TOPBP1-205ENST00000506779 H3BUT2 72 aa1.41□□□□□ -2.18
TOPBP1-205ENST00000506779 TAX1BP3O14907 124 aa1.41□□□□□ -2.18
TOPBP1-205ENST00000506779 PSCAO43653 123 aa1.41□□□□□ -2.18
TOPBP1-205ENST00000506779 NDUFC2O95298 119 aa1.41□□□□□ -2.18
TOPBP1-205ENST00000506779 PFN2P35080 140 aa1.41□□□□□ -2.18
TOPBP1-205ENST00000506779 FXYD2P54710 66 aa1.41□□□□□ -2.18
TOPBP1-205ENST00000506779 TSPEAR-AS2P59090 65 aa1.41□□□□□ -2.18
TOPBP1-205ENST00000506779 SPAG11BQ08648 103 aa1.41□□□□□ -2.18
TOPBP1-205ENST00000506779 SYCNQ0VAF6 134 aa1.41□□□□□ -2.18
TOPBP1-205ENST00000506779 LINC00483Q53H64 154 aa1.41□□□□□ -2.18
TOPBP1-205ENST00000506779 C5orf47Q569G3 176 aa1.41□□□□□ -2.18
TOPBP1-205ENST00000506779 CLPSL2Q6UWE3 100 aa1.41□□□□□ -2.18
TOPBP1-205ENST00000506779 ARL17AQ8IVW1 177 aa1.41□□□□□ -2.18
TOPBP1-205ENST00000506779 MIR7-3HGQ8N6C7 128 aa1.41□□□□□ -2.18
TOPBP1-205ENST00000506779 LINC00308Q8TCZ7 52 aa1.41□□□□□ -2.18
TOPBP1-205ENST00000506779 CAMK2N2Q96S95 79 aa1.41□□□□□ -2.18
TOPBP1-205ENST00000506779 TTTY13Q9BZ97 58 aa1.41□□□□□ -2.18
TOPBP1-205ENST00000506779 TMEM126AQ9H061 195 aa1.41□□□□□ -2.18
TOPBP1-205ENST00000506779 SND1-IT1Q9HBX3 110 aa1.41□□□□□ -2.18
TOPBP1-205ENST00000506779 LINC00588Q9Y4M8 146 aa1.41□□□□□ -2.18
TOPBP1-205ENST00000506779 PCLOQ9Y6V0 5065 aa1.4□□□□□ -2.19
TOPBP1-205ENST00000506779 TRBV10-2A0A0K0K1G8 114 aa1.4□□□□□ -2.19
TOPBP1-205ENST00000506779 H3BQ85 93 aa1.4□□□□□ -2.19
TOPBP1-205ENST00000506779 J3QR89 54 aa1.4□□□□□ -2.19
TOPBP1-205ENST00000506779 K7EP34 96 aa1.4□□□□□ -2.19
TOPBP1-205ENST00000506779 RPL28P46779 137 aaKnown RBP1.4□□□□□ -2.19
TOPBP1-205ENST00000506779 ATXN8Q156A1 80 aa1.4□□□□□ -2.19
TOPBP1-205ENST00000506779 S100A7L2Q5SY68 101 aa1.4□□□□□ -2.19
TOPBP1-205ENST00000506779 APLNQ9ULZ1 77 aa1.4□□□□□ -2.19
TOPBP1-205ENST00000506779 SPCS1Q9Y6A9 102 aa1.4□□□□□ -2.19
TOPBP1-205ENST00000506779 RYR3Q15413 4870 aa1.39□□□□□ -2.19
TOPBP1-205ENST00000506779 TENM3Q9P273 2699 aa1.39□□□□□ -2.19
TOPBP1-205ENST00000506779 KMT2CQ8NEZ4 4911 aaKnown RBP1.39□□□□□ -2.19
TOPBP1-205ENST00000506779 NBDYA0A0U1RRE5 68 aa1.39□□□□□ -2.19
TOPBP1-205ENST00000506779 A0A1B0GX51 115 aa1.39□□□□□ -2.19
TOPBP1-205ENST00000506779 C3orf84H3BNL1 204 aa1.39□□□□□ -2.19
TOPBP1-205ENST00000506779 H7C2G1 150 aa1.39□□□□□ -2.19
TOPBP1-205ENST00000506779 K7ERJ3 54 aa1.39□□□□□ -2.19
TOPBP1-205ENST00000506779 K7ERU9 68 aa1.39□□□□□ -2.19
TOPBP1-205ENST00000506779 M0QXV9 152 aa1.39□□□□□ -2.19
TOPBP1-205ENST00000506779 SLC25A20O43772 301 aa1.39□□□□□ -2.19
TOPBP1-205ENST00000506779 TSPAN13O95857 204 aa1.39□□□□□ -2.19
TOPBP1-205ENST00000506779 DNAL4O96015 105 aa1.39□□□□□ -2.19
TOPBP1-205ENST00000506779 NPC2P61916 151 aa1.39□□□□□ -2.19
TOPBP1-205ENST00000506779 KRTAP26-1Q6PEX3 210 aa1.39□□□□□ -2.19
TOPBP1-205ENST00000506779 C2orf82Q6UX34 121 aa1.39□□□□□ -2.19
TOPBP1-205ENST00000506779 UNQ6190/PRO20217Q6UXQ8 127 aa1.39□□□□□ -2.19
TOPBP1-205ENST00000506779 DAND5Q8N907 189 aa1.39□□□□□ -2.19
TOPBP1-205ENST00000506779 OR13C6PQ8NH95 151 aa1.39□□□□□ -2.19
TOPBP1-205ENST00000506779 CARD19Q96LW7 228 aa1.39□□□□□ -2.19
TOPBP1-205ENST00000506779 LINC00474Q9P2X8 69 aa1.39□□□□□ -2.19
TOPBP1-205ENST00000506779 TENM1Q9UKZ4 2725 aa1.38□□□□□ -2.19
TOPBP1-205ENST00000506779 TRBV7-6A0A0J9YX20 115 aa1.38□□□□□ -2.19
TOPBP1-205ENST00000506779 LOC107984640A0A0U1RRK4 108 aa1.38□□□□□ -2.19
TOPBP1-205ENST00000506779 H3BMG7 143 aa1.38□□□□□ -2.19
TOPBP1-205ENST00000506779 H3BT86 120 aa1.38□□□□□ -2.19
TOPBP1-205ENST00000506779 M0R378 163 aa1.38□□□□□ -2.19
TOPBP1-205ENST00000506779 TRACP01848 142 aa1.38□□□□□ -2.19
TOPBP1-205ENST00000506779 CNBPP62633 177 aaKnown RBP1.38□□□□□ -2.19
TOPBP1-205ENST00000506779 OCIAD2Q56VL3 154 aa1.38□□□□□ -2.19
TOPBP1-205ENST00000506779 Q6ZRU5 148 aa1.38□□□□□ -2.19
TOPBP1-205ENST00000506779 C6orf48Q9UBA6 75 aa1.38□□□□□ -2.19
TOPBP1-205ENST00000506779 TRAV23DV6A0A075B6W5 121 aa1.37□□□□□ -2.19
TOPBP1-205ENST00000506779 C16orf90A8MZG2 172 aa1.37□□□□□ -2.19
TOPBP1-205ENST00000506779 C9JAW5 83 aa1.37□□□□□ -2.19
TOPBP1-205ENST00000506779 JMJD7-PLA2G4BH0Y9G9 81 aa1.37□□□□□ -2.19
TOPBP1-205ENST00000506779 TMEM256-PLSCR3K7ERE1 68 aa1.37□□□□□ -2.19
TOPBP1-205ENST00000506779 LST1O00453 97 aa1.37□□□□□ -2.19
TOPBP1-205ENST00000506779 TCL1BO95988 128 aa1.37□□□□□ -2.19
TOPBP1-205ENST00000506779 IGLV6-57P01721 117 aa1.37□□□□□ -2.19
TOPBP1-205ENST00000506779 INAFM2P0DMQ5 153 aa1.37□□□□□ -2.19
TOPBP1-205ENST00000506779 RPL18AQ02543 176 aaKnown RBP1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms