RNA–Protein interactions for RNA: ENST00000505756.1

KDM3B-203, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-203ENST00000505756 XAGE1AQ9HD64 81 aa7.04□□□□□ -1.28
KDM3B-203ENST00000505756 NHP2Q9NX24 153 aaKnown RBP7.04□□□□□ -1.28
KDM3B-203ENST00000505756 C1orf137Q5JT78 98 aa7.03□□□□□ -1.28
KDM3B-203ENST00000505756 COL5A1-AS1Q5SY13 56 aa7.03□□□□□ -1.28
KDM3B-203ENST00000505756 TRAV13-2A0A0B4J235 113 aa7.02□□□□□ -1.29
KDM3B-203ENST00000505756 LINC00337Q8N6G1 96 aa7.02□□□□□ -1.29
KDM3B-203ENST00000505756 UBE2BP63146 152 aa7.01□□□□□ -1.29
KDM3B-203ENST00000505756 SERTAD4-AS1Q5TG53 156 aa7.01□□□□□ -1.29
KDM3B-203ENST00000505756 REG3GQ6UW15 175 aa7.01□□□□□ -1.29
KDM3B-203ENST00000505756 PRO1854Q9UHT4 67 aa7.01□□□□□ -1.29
KDM3B-203ENST00000505756 IGLV6-57P01721 117 aa7□□□□□ -1.29
KDM3B-203ENST00000505756 MT1HL1P0DM35 61 aa7□□□□□ -1.29
KDM3B-203ENST00000505756 BATFQ16520 125 aa7□□□□□ -1.29
KDM3B-203ENST00000505756 KRTAP11-1Q8IUC1 163 aa7□□□□□ -1.29
KDM3B-203ENST00000505756 K7ERJ3 54 aa6.99□□□□□ -1.29
KDM3B-203ENST00000505756 TAX1BP3O14907 124 aa6.99□□□□□ -1.29
KDM3B-203ENST00000505756 GHRHP01286 108 aa6.99□□□□□ -1.29
KDM3B-203ENST00000505756 IGLV7-43P04211 117 aa6.99□□□□□ -1.29
KDM3B-203ENST00000505756 SMCPP49901 116 aaPredicted RBP6.99□□□□□ -1.29
KDM3B-203ENST00000505756 RAB37Q96AX2 223 aa6.99□□□□□ -1.29
KDM3B-203ENST00000505756 LINC01600Q96MT4 127 aa6.99□□□□□ -1.29
KDM3B-203ENST00000505756 C22orf24Q9Y442 160 aa6.99□□□□□ -1.29
KDM3B-203ENST00000505756 M0R378 163 aa6.98□□□□□ -1.29
KDM3B-203ENST00000505756 TMEM126AQ9H061 195 aa6.98□□□□□ -1.29
KDM3B-203ENST00000505756 HMCN2Q8NDA2 5059 aa6.97□□□□□ -1.29
KDM3B-203ENST00000505756 RPL13AP40429 203 aaKnown RBP6.97□□□□□ -1.29
KDM3B-203ENST00000505756 MRPL55Q7Z7F7 128 aaKnown RBP6.97□□□□□ -1.29
KDM3B-203ENST00000505756 TNXBP22105 4242 aa6.97□□□□□ -1.29
KDM3B-203ENST00000505756 C9orf118A6NHY6 69 aa6.96□□□□□ -1.3
KDM3B-203ENST00000505756 NCR3O14931 201 aa6.96□□□□□ -1.3
KDM3B-203ENST00000505756 TSPAN13O95857 204 aa6.96□□□□□ -1.3
KDM3B-203ENST00000505756 RPL28P46779 137 aaKnown RBP6.96□□□□□ -1.3
KDM3B-203ENST00000505756 NKAPP1Q8N9T2 125 aa6.96□□□□□ -1.3
KDM3B-203ENST00000505756 CBY1Q9Y3M2 126 aa6.96□□□□□ -1.3
KDM3B-203ENST00000505756 DIRC1Q969H9 104 aa6.95□□□□□ -1.3
KDM3B-203ENST00000505756 TRBV10-3A0A0K0K1G6 114 aa6.94□□□□□ -1.3
KDM3B-203ENST00000505756 C21orf62-AS1Q17RA5 79 aa6.94□□□□□ -1.3
KDM3B-203ENST00000505756 KCNQ1DNQ9H478 68 aa6.94□□□□□ -1.3
KDM3B-203ENST00000505756 IGLV1-50A0A075B6I6 118 aa6.93□□□□□ -1.3
KDM3B-203ENST00000505756 H0Y9J4 135 aa6.93□□□□□ -1.3
KDM3B-203ENST00000505756 S100A7L2Q5SY68 101 aa6.93□□□□□ -1.3
KDM3B-203ENST00000505756 LINC00167Q96N53 147 aa6.93□□□□□ -1.3
KDM3B-203ENST00000505756 TRBV7-6A0A0J9YX20 115 aa6.92□□□□□ -1.3
KDM3B-203ENST00000505756 PRYO14603 147 aa6.92□□□□□ -1.3
KDM3B-203ENST00000505756 SPRR1AP35321 89 aa6.92□□□□□ -1.3
KDM3B-203ENST00000505756 KRTAP10-8P60410 259 aa6.92□□□□□ -1.3
KDM3B-203ENST00000505756 SMIM11BQ8TCY0 68 aa6.92□□□□□ -1.3
KDM3B-203ENST00000505756 TRAV23DV6A0A075B6W5 121 aa6.91□□□□□ -1.3
KDM3B-203ENST00000505756 GAGE10A6NGK3 116 aa6.91□□□□□ -1.3
KDM3B-203ENST00000505756 RPL37AP8A6NKH3 93 aa6.91□□□□□ -1.3
KDM3B-203ENST00000505756 TRIAP1O43715 76 aa6.91□□□□□ -1.3
KDM3B-203ENST00000505756 ZNF861PO60384 105 aa6.91□□□□□ -1.3
KDM3B-203ENST00000505756 LYRM7Q5U5X0 104 aa6.91□□□□□ -1.3
KDM3B-203ENST00000505756 OR13C6PQ8NH95 151 aa6.91□□□□□ -1.3
KDM3B-203ENST00000505756 A0A1W2PPM0 123 aa6.9□□□□□ -1.3
KDM3B-203ENST00000505756 KRTAP4-16G5E9R7 235 aaPredicted RBP6.9□□□□□ -1.3
KDM3B-203ENST00000505756 H3BUT2 72 aa6.9□□□□□ -1.3
KDM3B-203ENST00000505756 BCE1O60756 84 aa6.9□□□□□ -1.3
KDM3B-203ENST00000505756 Q1RN00 199 aa6.9□□□□□ -1.3
KDM3B-203ENST00000505756 ZNF73O43830 326 aaPredicted RBP6.89□□□□□ -1.31
KDM3B-203ENST00000505756 COX6CP09669 75 aa6.88□□□□□ -1.31
KDM3B-203ENST00000505756 H0YGX0 51 aa6.87□□□□□ -1.31
KDM3B-203ENST00000505756 H7C2G1 150 aa6.87□□□□□ -1.31
KDM3B-203ENST00000505756 KRTAP1-4P0C5Y4 121 aa6.87□□□□□ -1.31
KDM3B-203ENST00000505756 FABP2P12104 132 aa6.87□□□□□ -1.31
KDM3B-203ENST00000505756 ELOF1P60002 83 aaKnown RBP6.87□□□□□ -1.31
KDM3B-203ENST00000505756 C6orf99Q4VX62 202 aa6.87□□□□□ -1.31
KDM3B-203ENST00000505756 TRBV20-1A0A075B6N2 111 aa6.86□□□□□ -1.31
KDM3B-203ENST00000505756 A0A1B0GX51 115 aa6.86□□□□□ -1.31
KDM3B-203ENST00000505756 LST1O00453 97 aa6.85□□□□□ -1.31
KDM3B-203ENST00000505756 PSMB2P49721 201 aa6.85□□□□□ -1.31
KDM3B-203ENST00000505756 PRR26Q8N8Z3 221 aa6.85□□□□□ -1.31
KDM3B-203ENST00000505756 NAA38Q9BRA0 125 aaKnown RBP6.85□□□□□ -1.31
KDM3B-203ENST00000505756 UBE2AP49459 152 aa6.84□□□□□ -1.31
KDM3B-203ENST00000505756 VAMP3Q15836 100 aa6.84□□□□□ -1.31
KDM3B-203ENST00000505756 Q6ZRX8 168 aa6.84□□□□□ -1.31
KDM3B-203ENST00000505756 KRTAP13-1Q8IUC0 172 aa6.84□□□□□ -1.31
KDM3B-203ENST00000505756 B5MCH6 92 aa6.83□□□□□ -1.32
KDM3B-203ENST00000505756 K7EP34 96 aa6.83□□□□□ -1.32
KDM3B-203ENST00000505756 TCL1BO95988 128 aa6.83□□□□□ -1.32
KDM3B-203ENST00000505756 TRACP01848 142 aa6.83□□□□□ -1.32
KDM3B-203ENST00000505756 COX7BP24311 80 aa6.82□□□□□ -1.32
KDM3B-203ENST00000505756 FAM218AQ96MZ4 157 aa6.82□□□□□ -1.32
KDM3B-203ENST00000505756 SPCS1Q9Y6A9 102 aa6.82□□□□□ -1.32
KDM3B-203ENST00000505756 A0A1B0GV90 55 aa6.81□□□□□ -1.32
KDM3B-203ENST00000505756 SCGB1C2P0DMR2 95 aa6.81□□□□□ -1.32
KDM3B-203ENST00000505756 ATXN8Q156A1 80 aa6.81□□□□□ -1.32
KDM3B-203ENST00000505756 LINC00575Q6W349 94 aa6.81□□□□□ -1.32
KDM3B-203ENST00000505756 FAM19A1Q7Z5A9 133 aa6.81□□□□□ -1.32
KDM3B-203ENST00000505756 UBR4Q5T4S7 5183 aa6.8□□□□□ -1.32
KDM3B-203ENST00000505756 ETDCA0A1B0GVM5 59 aa6.8□□□□□ -1.32
KDM3B-203ENST00000505756 PRLHP81277 87 aa6.8□□□□□ -1.32
KDM3B-203ENST00000505756 GTF2H5Q6ZYL4 71 aa6.8□□□□□ -1.32
KDM3B-203ENST00000505756 CLEC2BQ92478 149 aa6.8□□□□□ -1.32
KDM3B-203ENST00000505756 DHRS4-AS1Q9P1J3 65 aa6.79□□□□□ -1.32
KDM3B-203ENST00000505756 Q9BRP9 147 aa6.78□□□□□ -1.32
KDM3B-203ENST00000505756 hADV29S1A0JD25 119 aa6.77□□□□□ -1.33
KDM3B-203ENST00000505756 CRYGAP11844 174 aa6.77□□□□□ -1.33
KDM3B-203ENST00000505756 SMCR5Q8TEV8 140 aa6.77□□□□□ -1.33
KDM3B-203ENST00000505756 A0A087X002 238 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms