RNA–Protein interactions for RNA: ENST00000505020.1

CDH9-202, Transcript of cadherin 9, humanhuman

TSL 2

Gene CDH9, Length 1,836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-202ENST00000505020 Q6ZRX8 168 aa3.7□□□□□ -1.82
CDH9-202ENST00000505020 CFAP47Q6ZTR5 3102 aa3.7□□□□□ -1.82
CDH9-202ENST00000505020 PRR9Q5T870 116 aa3.7□□□□□ -1.82
CDH9-202ENST00000505020 ANAPC11Q9NYG5 84 aa3.7□□□□□ -1.82
CDH9-202ENST00000505020 MAST4O15021 2626 aa3.7□□□□□ -1.82
CDH9-202ENST00000505020 SPTBN2O15020 2390 aa3.69□□□□□ -1.82
CDH9-202ENST00000505020 KRTAP5-9P26371 169 aa3.69□□□□□ -1.82
CDH9-202ENST00000505020 IGKV2-24A0A0C4DH68 120 aa3.68□□□□□ -1.82
CDH9-202ENST00000505020 OTOGLQ3ZCN5 2332 aa3.68□□□□□ -1.82
CDH9-202ENST00000505020 CPSF4LA6NMK7 179 aaKnown RBP3.67□□□□□ -1.82
CDH9-202ENST00000505020 PLAC4Q8WY50 150 aa3.67□□□□□ -1.82
CDH9-202ENST00000505020 ZFYVE26Q68DK2 2539 aa3.67□□□□□ -1.82
CDH9-202ENST00000505020 DEFB103AP81534 67 aa3.67□□□□□ -1.82
CDH9-202ENST00000505020 SMIM11BQ8TCY0 68 aa3.67□□□□□ -1.82
CDH9-202ENST00000505020 ASH1LQ9NR48 2969 aaKnown RBP3.66□□□□□ -1.82
CDH9-202ENST00000505020 PRB1P04280 392 aa3.66□□□□□ -1.82
CDH9-202ENST00000505020 NAV2Q8IVL1 2488 aa3.66□□□□□ -1.82
CDH9-202ENST00000505020 DMXL1Q9Y485 3027 aa3.65□□□□□ -1.82
CDH9-202ENST00000505020 DNAH14Q0VDD8 3507 aa3.65□□□□□ -1.82
CDH9-202ENST00000505020 GVQW2A0A096LPI5 108 aaPredicted RBP3.65□□□□□ -1.82
CDH9-202ENST00000505020 KRTAP1-4P0C5Y4 121 aa3.65□□□□□ -1.82
CDH9-202ENST00000505020 Q9Y3F1 56 aa3.65□□□□□ -1.82
CDH9-202ENST00000505020 MYO15AQ9UKN7 3530 aa3.65□□□□□ -1.83
CDH9-202ENST00000505020 RPL38P63173 70 aaKnown RBP3.65□□□□□ -1.83
CDH9-202ENST00000505020 TMEM167BQ9NRX6 74 aa3.65□□□□□ -1.83
CDH9-202ENST00000505020 GCN1Q92616 2671 aaKnown RBP3.65□□□□□ -1.83
CDH9-202ENST00000505020 DMDP11532 3685 aa3.64□□□□□ -1.83
CDH9-202ENST00000505020 A0A096LNT2 108 aa3.63□□□□□ -1.83
CDH9-202ENST00000505020 TRIOO75962 3097 aa3.63□□□□□ -1.83
CDH9-202ENST00000505020 ANKRD17O75179 2603 aaKnown RBP3.63□□□□□ -1.83
CDH9-202ENST00000505020 CADP27708 2225 aa3.63□□□□□ -1.83
CDH9-202ENST00000505020 PIN1P1O15428 100 aa3.63□□□□□ -1.83
CDH9-202ENST00000505020 C10orf99Q6UWK7 81 aa3.63□□□□□ -1.83
CDH9-202ENST00000505020 LY6G6CO95867 125 aa3.62□□□□□ -1.83
CDH9-202ENST00000505020 KRTAP10-9P60411 292 aa3.62□□□□□ -1.83
CDH9-202ENST00000505020 CRIP1P50238 77 aa3.61□□□□□ -1.83
CDH9-202ENST00000505020 HELZ2Q9BYK8 2649 aaKnown RBP3.61□□□□□ -1.83
CDH9-202ENST00000505020 WDR87Q6ZQQ6 2873 aa3.6□□□□□ -1.83
CDH9-202ENST00000505020 PP632Q6XCG6 107 aa3.6□□□□□ -1.83
CDH9-202ENST00000505020 DEFB131BA0A096LNP1 70 aa3.58□□□□□ -1.84
CDH9-202ENST00000505020 MRPL33O75394 65 aaKnown RBP3.58□□□□□ -1.84
CDH9-202ENST00000505020 CEP295Q9C0D2 2601 aa3.58□□□□□ -1.84
CDH9-202ENST00000505020 GOLGA4Q13439 2230 aaKnown RBP3.58□□□□□ -1.84
CDH9-202ENST00000505020 VPS13AQ96RL7 3174 aa3.58□□□□□ -1.84
CDH9-202ENST00000505020 USP9XQ93008 2570 aaPredicted RBP3.58□□□□□ -1.84
CDH9-202ENST00000505020 KRTAP2-2Q9BYT5 123 aa3.58□□□□□ -1.84
CDH9-202ENST00000505020 CNOT1A5YKK6 2376 aaKnown RBP3.57□□□□□ -1.84
CDH9-202ENST00000505020 IGF2RP11717 2491 aa3.57□□□□□ -1.84
CDH9-202ENST00000505020 SPTY2D1-AS1A0A0U1RR47 76 aa3.57□□□□□ -1.84
CDH9-202ENST00000505020 GAS8-AS1O95177 125 aa3.56□□□□□ -1.84
CDH9-202ENST00000505020 ANGP03950 147 aaKnown RBP3.55□□□□□ -1.84
CDH9-202ENST00000505020 LINC00158P58513 81 aa3.54□□□□□ -1.84
CDH9-202ENST00000505020 KRTAP12-2P59991 146 aa3.54□□□□□ -1.84
CDH9-202ENST00000505020 IGFL1Q6UW32 110 aa3.54□□□□□ -1.84
CDH9-202ENST00000505020 ZNF462Q96JM2 2506 aa3.54□□□□□ -1.84
CDH9-202ENST00000505020 FRYLO94915 3013 aa3.54□□□□□ -1.84
CDH9-202ENST00000505020 NBEAQ8NFP9 2946 aa3.54□□□□□ -1.84
CDH9-202ENST00000505020 IGSF10Q6WRI0 2623 aa3.53□□□□□ -1.84
CDH9-202ENST00000505020 PTPN13Q12923 2485 aa3.53□□□□□ -1.84
CDH9-202ENST00000505020 ZZEF1O43149 2961 aa3.53□□□□□ -1.84
CDH9-202ENST00000505020 J3QKU1 62 aa3.53□□□□□ -1.84
CDH9-202ENST00000505020 LCE1AQ5T7P2 110 aa3.53□□□□□ -1.84
CDH9-202ENST00000505020 SPEGQ15772 3267 aa3.53□□□□□ -1.84
CDH9-202ENST00000505020 SPTA1P02549 2419 aa3.53□□□□□ -1.84
CDH9-202ENST00000505020 MYO18BQ8IUG5 2567 aa3.52□□□□□ -1.85
CDH9-202ENST00000505020 FRYQ5TBA9 3013 aa3.52□□□□□ -1.85
CDH9-202ENST00000505020 MT3P25713 68 aa3.52□□□□□ -1.85
CDH9-202ENST00000505020 ASPMQ8IZT6 3477 aa3.52□□□□□ -1.85
CDH9-202ENST00000505020 HECTD1Q9ULT8 2610 aa3.52□□□□□ -1.85
CDH9-202ENST00000505020 URB1O60287 2271 aaKnown RBP3.52□□□□□ -1.85
CDH9-202ENST00000505020 BPTFQ12830 3046 aa3.52□□□□□ -1.85
CDH9-202ENST00000505020 ASXL3Q9C0F0 2248 aa3.51□□□□□ -1.85
CDH9-202ENST00000505020 TFF3Q07654 80 aa3.51□□□□□ -1.85
CDH9-202ENST00000505020 KRTAP5-11Q6L8G4 156 aa3.51□□□□□ -1.85
CDH9-202ENST00000505020 CDKN2A-AS1Q9UH64 79 aa3.51□□□□□ -1.85
CDH9-202ENST00000505020 ICE1Q9Y2F5 2266 aa3.5□□□□□ -1.85
CDH9-202ENST00000505020 LCE1FQ5T754 118 aa3.5□□□□□ -1.85
CDH9-202ENST00000505020 TEP1Q99973 2627 aaKnown RBP3.5□□□□□ -1.85
CDH9-202ENST00000505020 DSPP15924 2871 aaKnown RBP3.5□□□□□ -1.85
CDH9-202ENST00000505020 ITPR1Q14643 2758 aa3.5□□□□□ -1.85
CDH9-202ENST00000505020 SMG1Q96Q15 3661 aaKnown RBP3.5□□□□□ -1.85
CDH9-202ENST00000505020 TENM4Q6N022 2769 aa3.49□□□□□ -1.85
CDH9-202ENST00000505020 LINC00308Q8TCZ7 52 aa3.49□□□□□ -1.85
CDH9-202ENST00000505020 CRIPTQ9P021 101 aa3.49□□□□□ -1.85
CDH9-202ENST00000505020 CD52P31358 61 aa3.47□□□□□ -1.85
CDH9-202ENST00000505020 SPINK13Q1W4C9 94 aa3.47□□□□□ -1.85
CDH9-202ENST00000505020 MYO9AB2RTY4 2548 aa3.47□□□□□ -1.85
CDH9-202ENST00000505020 Q8IZM0 81 aa3.47□□□□□ -1.85
CDH9-202ENST00000505020 DOPEY1Q5JWR5 2465 aa3.46□□□□□ -1.86
CDH9-202ENST00000505020 DEFB124Q8NES8 71 aa3.46□□□□□ -1.86
CDH9-202ENST00000505020 AKAP13Q12802 2813 aa3.46□□□□□ -1.86
CDH9-202ENST00000505020 ABCA12Q86UK0 2595 aa3.46□□□□□ -1.86
CDH9-202ENST00000505020 SPTAN1Q13813 2472 aaKnown RBP3.45□□□□□ -1.86
CDH9-202ENST00000505020 RPL37P61927 97 aaKnown RBP3.45□□□□□ -1.86
CDH9-202ENST00000505020 PRB3Q04118 309 aaPredicted RBP3.45□□□□□ -1.86
CDH9-202ENST00000505020 SMIM2Q9BVW6 85 aa3.45□□□□□ -1.86
CDH9-202ENST00000505020 PIEZO2Q9H5I5 2752 aa3.45□□□□□ -1.86
CDH9-202ENST00000505020 APC2O95996 2303 aa3.44□□□□□ -1.86
CDH9-202ENST00000505020 ACACAQ13085 2346 aa3.44□□□□□ -1.86
CDH9-202ENST00000505020 DMXL2Q8TDJ6 3036 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms