RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 USP34Q70CQ2 3546 aa1.41□□□□□ -2.18
TRAPPC13-205ENST00000504243 TEX15Q9BXT5 2789 aa1.41□□□□□ -2.18
TRAPPC13-205ENST00000504243 CSMD1Q96PZ7 3565 aa1.41□□□□□ -2.18
TRAPPC13-205ENST00000504243 ADCY10Q96PN6 1610 aa1.4□□□□□ -2.18
TRAPPC13-205ENST00000504243 NUP188Q5SRE5 1749 aa1.4□□□□□ -2.18
TRAPPC13-205ENST00000504243 FLNCQ14315 2725 aa1.4□□□□□ -2.18
TRAPPC13-205ENST00000504243 C5P01031 1676 aa1.4□□□□□ -2.19
TRAPPC13-205ENST00000504243 DIP2AQ14689 1571 aa1.4□□□□□ -2.19
TRAPPC13-205ENST00000504243 FCER1GP30273 86 aa1.4□□□□□ -2.19
TRAPPC13-205ENST00000504243 SPINK13Q1W4C9 94 aa1.4□□□□□ -2.19
TRAPPC13-205ENST00000504243 DEFB112Q30KQ8 113 aa1.4□□□□□ -2.19
TRAPPC13-205ENST00000504243 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.4□□□□□ -2.19
TRAPPC13-205ENST00000504243 Q96NJ1 140 aa1.4□□□□□ -2.19
TRAPPC13-205ENST00000504243 CCL19Q99731 98 aa1.4□□□□□ -2.19
TRAPPC13-205ENST00000504243 CMC2Q9NRP2 79 aa1.4□□□□□ -2.19
TRAPPC13-205ENST00000504243 NBEAL1Q6ZS30 2694 aa1.4□□□□□ -2.19
TRAPPC13-205ENST00000504243 FLNAP21333 2647 aaKnown RBP1.39□□□□□ -2.19
TRAPPC13-205ENST00000504243 C5orf42Q9H799 3197 aa1.39□□□□□ -2.19
TRAPPC13-205ENST00000504243 HYDINQ4G0P3 5121 aa1.39□□□□□ -2.19
TRAPPC13-205ENST00000504243 UBR5O95071 2799 aaPredicted RBP1.39□□□□□ -2.19
TRAPPC13-205ENST00000504243 SMIM11BQ8TCY0 68 aa1.39□□□□□ -2.19
TRAPPC13-205ENST00000504243 LRRC37A2A6NM11 1700 aa1.39□□□□□ -2.19
TRAPPC13-205ENST00000504243 IGSF10Q6WRI0 2623 aa1.39□□□□□ -2.19
TRAPPC13-205ENST00000504243 LRP6O75581 1613 aa1.39□□□□□ -2.19
TRAPPC13-205ENST00000504243 FBN2P35556 2912 aa1.39□□□□□ -2.19
TRAPPC13-205ENST00000504243 WIZO95785 1651 aa1.39□□□□□ -2.19
TRAPPC13-205ENST00000504243 SAMD9Q5K651 1589 aa1.38□□□□□ -2.19
TRAPPC13-205ENST00000504243 TECTAO75443 2155 aa1.38□□□□□ -2.19
TRAPPC13-205ENST00000504243 PIEZO2Q9H5I5 2752 aa1.38□□□□□ -2.19
TRAPPC13-205ENST00000504243 NCOA6Q14686 2063 aaPredicted RBP1.38□□□□□ -2.19
TRAPPC13-205ENST00000504243 TIAM2Q8IVF5 1701 aa1.38□□□□□ -2.19
TRAPPC13-205ENST00000504243 KIAA0556O60303 1618 aa1.38□□□□□ -2.19
TRAPPC13-205ENST00000504243 BIVM-ERCC5R4GMW8 1640 aa1.38□□□□□ -2.19
TRAPPC13-205ENST00000504243 GPR98Q8WXG9 6306 aa1.38□□□□□ -2.19
TRAPPC13-205ENST00000504243 CEP290O15078 2479 aa1.38□□□□□ -2.19
TRAPPC13-205ENST00000504243 LCE6AA0A183 80 aa1.38□□□□□ -2.19
TRAPPC13-205ENST00000504243 A0A1B0GU69 56 aa1.38□□□□□ -2.19
TRAPPC13-205ENST00000504243 PLAC4Q8WY50 150 aa1.38□□□□□ -2.19
TRAPPC13-205ENST00000504243 ATRQ13535 2644 aa1.38□□□□□ -2.19
TRAPPC13-205ENST00000504243 COL14A1Q05707 1796 aaKnown RBP1.38□□□□□ -2.19
TRAPPC13-205ENST00000504243 HTTP42858 3142 aa1.38□□□□□ -2.19
TRAPPC13-205ENST00000504243 ACACBO00763 2458 aa1.38□□□□□ -2.19
TRAPPC13-205ENST00000504243 RICTORQ6R327 1708 aa1.37□□□□□ -2.19
TRAPPC13-205ENST00000504243 BOD1L1Q8NFC6 3051 aa1.37□□□□□ -2.19
TRAPPC13-205ENST00000504243 PKD1L1Q8TDX9 2849 aa1.37□□□□□ -2.19
TRAPPC13-205ENST00000504243 BCORQ6W2J9 1755 aa1.37□□□□□ -2.19
TRAPPC13-205ENST00000504243 ABCC6O95255 1503 aa1.37□□□□□ -2.19
TRAPPC13-205ENST00000504243 EFCAB6Q5THR3 1501 aa1.37□□□□□ -2.19
TRAPPC13-205ENST00000504243 KIAA0586Q9BVV6 1533 aa1.37□□□□□ -2.19
TRAPPC13-205ENST00000504243 SMG1Q96Q15 3661 aaKnown RBP1.37□□□□□ -2.19
TRAPPC13-205ENST00000504243 K7EMI3 77 aa1.37□□□□□ -2.19
TRAPPC13-205ENST00000504243 SPINK7P58062 85 aa1.37□□□□□ -2.19
TRAPPC13-205ENST00000504243 ENHOQ6UWT2 76 aa1.37□□□□□ -2.19
TRAPPC13-205ENST00000504243 LINC00575Q6W349 94 aa1.37□□□□□ -2.19
TRAPPC13-205ENST00000504243 LINC00472Q9H8W2 130 aa1.37□□□□□ -2.19
TRAPPC13-205ENST00000504243 TLN1Q9Y490 2541 aaKnown RBP1.37□□□□□ -2.19
TRAPPC13-205ENST00000504243 IQGAP2Q13576 1575 aa1.37□□□□□ -2.19
TRAPPC13-205ENST00000504243 FMN2Q9NZ56 1722 aa1.37□□□□□ -2.19
TRAPPC13-205ENST00000504243 GVINP1Q7Z2Y8 2422 aa1.37□□□□□ -2.19
TRAPPC13-205ENST00000504243 ZMYM4Q5VZL5 1548 aa1.36□□□□□ -2.19
TRAPPC13-205ENST00000504243 MRPL33O75394 65 aaKnown RBP1.36□□□□□ -2.19
TRAPPC13-205ENST00000504243 PLNP26678 52 aa1.36□□□□□ -2.19
TRAPPC13-205ENST00000504243 HAMPP81172 84 aa1.36□□□□□ -2.19
TRAPPC13-205ENST00000504243 NCBP2-AS2Q69YL0 99 aa1.36□□□□□ -2.19
TRAPPC13-205ENST00000504243 Q6ZRX8 168 aa1.36□□□□□ -2.19
TRAPPC13-205ENST00000504243 ANKRD36CQ5JPF3 1778 aa1.36□□□□□ -2.19
TRAPPC13-205ENST00000504243 EIF2AK4Q9P2K8 1649 aaKnown RBP1.36□□□□□ -2.19
TRAPPC13-205ENST00000504243 TENM1Q9UKZ4 2725 aa1.36□□□□□ -2.19
TRAPPC13-205ENST00000504243 CNOT1A5YKK6 2376 aaKnown RBP1.35□□□□□ -2.19
TRAPPC13-205ENST00000504243 NBPF19A0A087WUL8 3843 aa1.35□□□□□ -2.19
TRAPPC13-205ENST00000504243 COX7BP24311 80 aa1.35□□□□□ -2.19
TRAPPC13-205ENST00000504243 DEFB114Q30KQ6 69 aa1.35□□□□□ -2.19
TRAPPC13-205ENST00000504243 ABRACLQ9P1F3 81 aa1.35□□□□□ -2.19
TRAPPC13-205ENST00000504243 BSNQ9UPA5 3926 aa1.35□□□□□ -2.19
TRAPPC13-205ENST00000504243 C3P01024 1663 aa1.35□□□□□ -2.19
TRAPPC13-205ENST00000504243 NCOR1O75376 2440 aa1.35□□□□□ -2.19
TRAPPC13-205ENST00000504243 PARP4Q9UKK3 1724 aaKnown RBP1.35□□□□□ -2.19
TRAPPC13-205ENST00000504243 DCHS1Q96JQ0 3298 aa1.34□□□□□ -2.19
TRAPPC13-205ENST00000504243 ABCA5Q8WWZ7 1642 aa1.34□□□□□ -2.19
TRAPPC13-205ENST00000504243 TENM4Q6N022 2769 aa1.34□□□□□ -2.19
TRAPPC13-205ENST00000504243 ZNF236Q9UL36 1845 aa1.34□□□□□ -2.19
TRAPPC13-205ENST00000504243 MED13LQ71F56 2210 aa1.34□□□□□ -2.19
TRAPPC13-205ENST00000504243 A0A096LNT2 108 aa1.34□□□□□ -2.19
TRAPPC13-205ENST00000504243 NDUFA4O00483 81 aa1.34□□□□□ -2.19
TRAPPC13-205ENST00000504243 FXYD6P3P58550 94 aa1.34□□□□□ -2.19
TRAPPC13-205ENST00000504243 FCGBPQ9Y6R7 5405 aaPredicted RBP1.34□□□□□ -2.19
TRAPPC13-205ENST00000504243 EPPK1P58107 5090 aaKnown RBP1.34□□□□□ -2.2
TRAPPC13-205ENST00000504243 A0A0G2JMZ2 1700 aa1.34□□□□□ -2.2
TRAPPC13-205ENST00000504243 POLR1AO95602 1720 aaPredicted RBP1.34□□□□□ -2.2
TRAPPC13-205ENST00000504243 GVQW2A0A096LPI5 108 aaPredicted RBP1.33□□□□□ -2.2
TRAPPC13-205ENST00000504243 SSBP3-AS1Q7Z2R9 100 aa1.33□□□□□ -2.2
TRAPPC13-205ENST00000504243 ABCC8Q09428 1581 aa1.33□□□□□ -2.2
TRAPPC13-205ENST00000504243 XIRP2A4UGR9 3374 aa1.33□□□□□ -2.2
TRAPPC13-205ENST00000504243 CEP295Q9C0D2 2601 aa1.33□□□□□ -2.2
TRAPPC13-205ENST00000504243 PDZD2O15018 2839 aa1.32□□□□□ -2.2
TRAPPC13-205ENST00000504243 AGLP35573 1532 aa1.32□□□□□ -2.2
TRAPPC13-205ENST00000504243 SPTY2D1-AS1A0A0U1RR47 76 aa1.32□□□□□ -2.2
TRAPPC13-205ENST00000504243 PRUNE2Q8WUY3 3088 aa1.32□□□□□ -2.2
TRAPPC13-205ENST00000504243 ROS1P08922 2347 aa1.32□□□□□ -2.2
TRAPPC13-205ENST00000504243 LY75O60449 1722 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms