RNA–Protein interactions for RNA: ENST00000503627.2

GYPA-203, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPA, Length 318 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-203ENST00000503627 FXYD6Q9H0Q3 95 aa1.16□□□□□ -2.22
GYPA-203ENST00000503627 PTPRQQ9UMZ3 2332 aa1.16□□□□□ -2.22
GYPA-203ENST00000503627 TJP1Q07157 1748 aa1.15□□□□□ -2.22
GYPA-203ENST00000503627 UBL5Q9BZL1 73 aa1.15□□□□□ -2.23
GYPA-203ENST00000503627 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.14□□□□□ -2.23
GYPA-203ENST00000503627 LINC01549A6NIU2 74 aa1.14□□□□□ -2.23
GYPA-203ENST00000503627 CCL22O00626 93 aa1.14□□□□□ -2.23
GYPA-203ENST00000503627 APLNQ9ULZ1 77 aa1.14□□□□□ -2.23
GYPA-203ENST00000503627 FBN2P35556 2912 aa1.14□□□□□ -2.23
GYPA-203ENST00000503627 PREX2Q70Z35 1606 aa1.14□□□□□ -2.23
GYPA-203ENST00000503627 PLXNC1O60486 1568 aa1.13□□□□□ -2.23
GYPA-203ENST00000503627 SPINK6Q6UWN8 80 aa1.13□□□□□ -2.23
GYPA-203ENST00000503627 PRH1P02810 166 aa1.12□□□□□ -2.23
GYPA-203ENST00000503627 ALS2Q96Q42 1657 aa1.12□□□□□ -2.23
GYPA-203ENST00000503627 EEA1Q15075 1411 aa1.12□□□□□ -2.23
GYPA-203ENST00000503627 ZNF292O60281 2723 aa1.12□□□□□ -2.23
GYPA-203ENST00000503627 GLI2P10070 1586 aa1.12□□□□□ -2.23
GYPA-203ENST00000503627 ZNF469Q96JG9 3925 aaPredicted RBP1.11□□□□□ -2.23
GYPA-203ENST00000503627 ABCA10Q8WWZ4 1543 aa1.11□□□□□ -2.23
GYPA-203ENST00000503627 DEFB105AQ8NG35 78 aa1.11□□□□□ -2.23
GYPA-203ENST00000503627 C4AP0C0L4 1744 aa1.11□□□□□ -2.23
GYPA-203ENST00000503627 C4BP0C0L5 1744 aa1.11□□□□□ -2.23
GYPA-203ENST00000503627 CELSR2Q9HCU4 2923 aa1.11□□□□□ -2.23
GYPA-203ENST00000503627 PRXQ9BXM0 1461 aa1.11□□□□□ -2.23
GYPA-203ENST00000503627 SPTBN1Q01082 2364 aaKnown RBP1.1□□□□□ -2.23
GYPA-203ENST00000503627 PIEZO1Q92508 2521 aa1.09□□□□□ -2.23
GYPA-203ENST00000503627 MROH2AA6NES4 1674 aa1.09□□□□□ -2.24
GYPA-203ENST00000503627 C3P01024 1663 aa1.09□□□□□ -2.24
GYPA-203ENST00000503627 ABCC6O95255 1503 aa1.09□□□□□ -2.24
GYPA-203ENST00000503627 TPRP12270 2363 aaKnown RBP1.08□□□□□ -2.24
GYPA-203ENST00000503627 ANK2Q01484 3957 aa1.08□□□□□ -2.24
GYPA-203ENST00000503627 CROCC2H7BZ55 1655 aa1.08□□□□□ -2.24
GYPA-203ENST00000503627 NDUFA3O95167 84 aa1.08□□□□□ -2.24
GYPA-203ENST00000503627 H1FX-AS1Q4G0G2 97 aa1.08□□□□□ -2.24
GYPA-203ENST00000503627 APCP25054 2843 aa1.08□□□□□ -2.24
GYPA-203ENST00000503627 RNF17Q9BXT8 1623 aaKnown RBP1.07□□□□□ -2.24
GYPA-203ENST00000503627 NOTCH1P46531 2555 aa1.07□□□□□ -2.24
GYPA-203ENST00000503627 MRPL33O75394 65 aaKnown RBP1.07□□□□□ -2.24
GYPA-203ENST00000503627 KLK9Q2XQG4 91 aa1.07□□□□□ -2.24
GYPA-203ENST00000503627 LELP1Q5T871 98 aa1.07□□□□□ -2.24
GYPA-203ENST00000503627 COX6B2Q6YFQ2 88 aa1.07□□□□□ -2.24
GYPA-203ENST00000503627 KCNQ1DNQ9H478 68 aa1.07□□□□□ -2.24
GYPA-203ENST00000503627 CDKN2A-AS1Q9UH64 79 aa1.07□□□□□ -2.24
GYPA-203ENST00000503627 CHD9Q3L8U1 2897 aa1.07□□□□□ -2.24
GYPA-203ENST00000503627 FCGBPQ9Y6R7 5405 aaPredicted RBP1.07□□□□□ -2.24
GYPA-203ENST00000503627 TNCP24821 2201 aa1.07□□□□□ -2.24
GYPA-203ENST00000503627 LY75O60449 1722 aa1.06□□□□□ -2.24
GYPA-203ENST00000503627 FCER1GP30273 86 aa1.05□□□□□ -2.24
GYPA-203ENST00000503627 SMR3AQ99954 134 aa1.05□□□□□ -2.24
GYPA-203ENST00000503627 GVINP1Q7Z2Y8 2422 aa1.05□□□□□ -2.24
GYPA-203ENST00000503627 CPS1P31327 1500 aa1.05□□□□□ -2.24
GYPA-203ENST00000503627 UGGT1Q9NYU2 1555 aa1.04□□□□□ -2.24
GYPA-203ENST00000503627 CNOT1A5YKK6 2376 aaKnown RBP1.04□□□□□ -2.24
GYPA-203ENST00000503627 DEFB131BA0A096LNP1 70 aa1.04□□□□□ -2.24
GYPA-203ENST00000503627 ETDCA0A1B0GVM5 59 aa1.04□□□□□ -2.24
GYPA-203ENST00000503627 DEFB109BQ30KR1 87 aa1.04□□□□□ -2.24
GYPA-203ENST00000503627 PRO3102Q9H379 93 aa1.04□□□□□ -2.24
GYPA-203ENST00000503627 ITSN2Q9NZM3 1697 aa1.04□□□□□ -2.24
GYPA-203ENST00000503627 SPINK4O60575 86 aa1.03□□□□□ -2.24
GYPA-203ENST00000503627 WFDC13Q8IUB5 93 aa1.03□□□□□ -2.24
GYPA-203ENST00000503627 MAST1Q9Y2H9 1570 aa1.03□□□□□ -2.24
GYPA-203ENST00000503627 SYCP2Q9BX26 1530 aa1.01□□□□□ -2.25
GYPA-203ENST00000503627 LINC00158P58513 81 aa1.01□□□□□ -2.25
GYPA-203ENST00000503627 AKAP6Q13023 2319 aa1.01□□□□□ -2.25
GYPA-203ENST00000503627 KIF1AQ12756 1690 aa1□□□□□ -2.25
GYPA-203ENST00000503627 DEFB114Q30KQ6 69 aa1□□□□□ -2.25
GYPA-203ENST00000503627 PKDREJQ9NTG1 2253 aa1□□□□□ -2.25
GYPA-203ENST00000503627 CSMD3Q7Z407 3707 aa0.98□□□□□ -2.25
GYPA-203ENST00000503627 M0R1W7 72 aa0.98□□□□□ -2.25
GYPA-203ENST00000503627 CRIP1P50238 77 aa0.98□□□□□ -2.25
GYPA-203ENST00000503627 NCBP2-AS2Q69YL0 99 aa0.98□□□□□ -2.25
GYPA-203ENST00000503627 DEPDC5O75140 1603 aa0.97□□□□□ -2.25
GYPA-203ENST00000503627 K7EMI3 77 aa0.97□□□□□ -2.25
GYPA-203ENST00000503627 NMES1Q9C002 83 aa0.97□□□□□ -2.25
GYPA-203ENST00000503627 SPINK1P00995 79 aa0.96□□□□□ -2.26
GYPA-203ENST00000503627 SERF2P84101 59 aa0.95□□□□□ -2.26
GYPA-203ENST00000503627 ANKRD36CQ5JPF3 1778 aa0.95□□□□□ -2.26
GYPA-203ENST00000503627 KIAA0586Q9BVV6 1533 aa0.94□□□□□ -2.26
GYPA-203ENST00000503627 H0YAA0 97 aa0.94□□□□□ -2.26
GYPA-203ENST00000503627 TOGARAM1Q9Y4F4 1720 aa0.92□□□□□ -2.26
GYPA-203ENST00000503627 FANCD2Q9BXW9 1451 aa0.92□□□□□ -2.26
GYPA-203ENST00000503627 LOC730098B7Z3J9 87 aa0.89□□□□□ -2.27
GYPA-203ENST00000503627 IAPPP10997 89 aa0.89□□□□□ -2.27
GYPA-203ENST00000503627 U3KQA8 63 aa0.89□□□□□ -2.27
GYPA-203ENST00000503627 ADCY10Q96PN6 1610 aa0.89□□□□□ -2.27
GYPA-203ENST00000503627 LYNX1G3V0Z9 82 aa0.88□□□□□ -2.27
GYPA-203ENST00000503627 MINOS1Q5TGZ0 78 aa0.88□□□□□ -2.27
GYPA-203ENST00000503627 IGF2RP11717 2491 aa0.88□□□□□ -2.27
GYPA-203ENST00000503627 CHD6Q8TD26 2715 aa0.87□□□□□ -2.27
GYPA-203ENST00000503627 TENM4Q6N022 2769 aa0.87□□□□□ -2.27
GYPA-203ENST00000503627 CDC42BPAQ5VT25 1732 aa0.87□□□□□ -2.27
GYPA-203ENST00000503627 VWFP04275 2813 aa0.87□□□□□ -2.27
GYPA-203ENST00000503627 CLASP1Q7Z460 1538 aa0.87□□□□□ -2.27
GYPA-203ENST00000503627 BPTFQ12830 3046 aa0.86□□□□□ -2.27
GYPA-203ENST00000503627 IGIPA6NJ69 53 aa0.86□□□□□ -2.27
GYPA-203ENST00000503627 DEFB130BP0DP73 79 aa0.86□□□□□ -2.27
GYPA-203ENST00000503627 DEFB130AP0DP74 79 aa0.86□□□□□ -2.27
GYPA-203ENST00000503627 NRXN3Q9Y4C0 1643 aa0.86□□□□□ -2.27
GYPA-203ENST00000503627 ZFYVE26Q68DK2 2539 aa0.85□□□□□ -2.27
GYPA-203ENST00000503627 SNRPGP15A8MWD9 76 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms