RNA–Protein interactions for RNA: ENST00000503204.1

CPNE4-203, Transcript of copine 4, humanhuman

TSL 2

Gene CPNE4, Length 700 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-203ENST00000503204 HCP5Q6MZN7 132 aa2.82□□□□□ -1.96
CPNE4-203ENST00000503204 Q6ZQT0 140 aa2.82□□□□□ -1.96
CPNE4-203ENST00000503204 COX14Q96I36 57 aa2.82□□□□□ -1.96
CPNE4-203ENST00000503204 HIGD2AQ9BW72 106 aa2.82□□□□□ -1.96
CPNE4-203ENST00000503204 PLAC8Q9NZF1 115 aa2.82□□□□□ -1.96
CPNE4-203ENST00000503204 HIVEP1P15822 2718 aa2.82□□□□□ -1.96
CPNE4-203ENST00000503204 APC2O95996 2303 aa2.81□□□□□ -1.96
CPNE4-203ENST00000503204 A0A087WSZ3 146 aa2.81□□□□□ -1.96
CPNE4-203ENST00000503204 H3BRN7 92 aa2.81□□□□□ -1.96
CPNE4-203ENST00000503204 ROMO1P60602 79 aa2.81□□□□□ -1.96
CPNE4-203ENST00000503204 Q8NDZ9 215 aa2.81□□□□□ -1.96
CPNE4-203ENST00000503204 FAM215AQ9Y5M1 114 aa2.81□□□□□ -1.96
CPNE4-203ENST00000503204 LRRK2Q5S007 2527 aa2.8□□□□□ -1.96
CPNE4-203ENST00000503204 DOPEY2Q9Y3R5 2298 aa2.8□□□□□ -1.96
CPNE4-203ENST00000503204 TRBV10-1A0A0K0K1A3 114 aa2.8□□□□□ -1.96
CPNE4-203ENST00000503204 C10orf142B7Z368 130 aa2.8□□□□□ -1.96
CPNE4-203ENST00000503204 IGKV3-11P04433 115 aa2.8□□□□□ -1.96
CPNE4-203ENST00000503204 HAMPP81172 84 aa2.8□□□□□ -1.96
CPNE4-203ENST00000503204 DEFB134Q4QY38 66 aa2.8□□□□□ -1.96
CPNE4-203ENST00000503204 SPINK9Q5DT21 86 aa2.8□□□□□ -1.96
CPNE4-203ENST00000503204 TMEM167AQ8TBQ9 72 aa2.8□□□□□ -1.96
CPNE4-203ENST00000503204 COX7B2Q8TF08 81 aa2.8□□□□□ -1.96
CPNE4-203ENST00000503204 Q9Y3F1 56 aa2.8□□□□□ -1.96
CPNE4-203ENST00000503204 SPTBP11277 2137 aa2.8□□□□□ -1.96
CPNE4-203ENST00000503204 MYO7BQ6PIF6 2116 aa2.8□□□□□ -1.96
CPNE4-203ENST00000503204 NCR3O14931 201 aa2.79□□□□□ -1.96
CPNE4-203ENST00000503204 Q6ZS52 159 aa2.79□□□□□ -1.96
CPNE4-203ENST00000503204 WFDC9Q8NEX5 89 aa2.79□□□□□ -1.96
CPNE4-203ENST00000503204 MTORP42345 2549 aa2.79□□□□□ -1.96
CPNE4-203ENST00000503204 MED12Q93074 2177 aa2.78□□□□□ -1.96
CPNE4-203ENST00000503204 PCNX1Q96RV3 2341 aa2.78□□□□□ -1.96
CPNE4-203ENST00000503204 ETDCA0A1B0GVM5 59 aa2.78□□□□□ -1.96
CPNE4-203ENST00000503204 KRTAP25-1Q3LHN0 102 aa2.78□□□□□ -1.96
CPNE4-203ENST00000503204 C1orf134Q5TEV5 83 aa2.78□□□□□ -1.96
CPNE4-203ENST00000503204 SPINT4Q6UDR6 99 aa2.78□□□□□ -1.96
CPNE4-203ENST00000503204 KCNQ1DNQ9H478 68 aa2.78□□□□□ -1.96
CPNE4-203ENST00000503204 URB1O60287 2271 aaKnown RBP2.78□□□□□ -1.96
CPNE4-203ENST00000503204 INTS1Q8N201 2190 aaKnown RBP2.78□□□□□ -1.96
CPNE4-203ENST00000503204 CACNA1CQ13936 2221 aa2.77□□□□□ -1.97
CPNE4-203ENST00000503204 SPG11Q96JI7 2443 aa2.77□□□□□ -1.97
CPNE4-203ENST00000503204 IGKV2-29A2NJV5 120 aaPredicted RBP2.77□□□□□ -1.97
CPNE4-203ENST00000503204 CLPSP04118 112 aa2.77□□□□□ -1.97
CPNE4-203ENST00000503204 Q8N9L7 120 aa2.77□□□□□ -1.97
CPNE4-203ENST00000503204 WFDC10AQ9H1F0 79 aa2.77□□□□□ -1.97
CPNE4-203ENST00000503204 ABCA2Q9BZC7 2435 aa2.77□□□□□ -1.97
CPNE4-203ENST00000503204 CACNA1EQ15878 2313 aa2.76□□□□□ -1.97
CPNE4-203ENST00000503204 ARFGEF3Q5TH69 2177 aa2.76□□□□□ -1.97
CPNE4-203ENST00000503204 IGLV10-54A0A075B6I4 117 aa2.76□□□□□ -1.97
CPNE4-203ENST00000503204 TRGV2A0A075B6R0 118 aa2.76□□□□□ -1.97
CPNE4-203ENST00000503204 NDUFA4O00483 81 aa2.76□□□□□ -1.97
CPNE4-203ENST00000503204 SPAG11BQ08648 103 aa2.76□□□□□ -1.97
CPNE4-203ENST00000503204 SPAG11AQ6PDA7 123 aa2.76□□□□□ -1.97
CPNE4-203ENST00000503204 SMIM11BQ8TCY0 68 aa2.76□□□□□ -1.97
CPNE4-203ENST00000503204 F8P00451 2351 aa2.76□□□□□ -1.97
CPNE4-203ENST00000503204 SDK1Q7Z5N4 2213 aa2.76□□□□□ -1.97
CPNE4-203ENST00000503204 CUBNO60494 3623 aa2.75□□□□□ -1.97
CPNE4-203ENST00000503204 ACACAQ13085 2346 aa2.75□□□□□ -1.97
CPNE4-203ENST00000503204 TACC2O95359 2948 aa2.75□□□□□ -1.97
CPNE4-203ENST00000503204 H0Y9P7 68 aa2.75□□□□□ -1.97
CPNE4-203ENST00000503204 H0YGG7 62 aa2.75□□□□□ -1.97
CPNE4-203ENST00000503204 MRPL33O75394 65 aaKnown RBP2.75□□□□□ -1.97
CPNE4-203ENST00000503204 IGKV4-1P06312 121 aa2.75□□□□□ -1.97
CPNE4-203ENST00000503204 COX7BP24311 80 aa2.75□□□□□ -1.97
CPNE4-203ENST00000503204 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.75□□□□□ -1.97
CPNE4-203ENST00000503204 APCP25054 2843 aa2.75□□□□□ -1.97
CPNE4-203ENST00000503204 TRBV6-4A0A1B0GX49 114 aa2.74□□□□□ -1.97
CPNE4-203ENST00000503204 MGPP08493 103 aa2.74□□□□□ -1.97
CPNE4-203ENST00000503204 CD52P31358 61 aa2.74□□□□□ -1.97
CPNE4-203ENST00000503204 R4GN34 69 aa2.74□□□□□ -1.97
CPNE4-203ENST00000503204 MINOS1-NBL1R4GNA1 71 aa2.74□□□□□ -1.97
CPNE4-203ENST00000503204 ATRQ13535 2644 aa2.74□□□□□ -1.97
CPNE4-203ENST00000503204 NBEAL2Q6ZNJ1 2754 aa2.73□□□□□ -1.97
CPNE4-203ENST00000503204 IGKV3D-11A0A0A0MRZ8 115 aa2.73□□□□□ -1.97
CPNE4-203ENST00000503204 LRCOL1A6NCL2 159 aa2.73□□□□□ -1.97
CPNE4-203ENST00000503204 B4DSR2 109 aa2.73□□□□□ -1.97
CPNE4-203ENST00000503204 WT1-ASQ06250 92 aa2.73□□□□□ -1.97
CPNE4-203ENST00000503204 MIR22HGQ0VDD5 57 aa2.73□□□□□ -1.97
CPNE4-203ENST00000503204 C1orf137Q5JT78 98 aa2.73□□□□□ -1.97
CPNE4-203ENST00000503204 SPATA8Q6RVD6 105 aa2.73□□□□□ -1.97
CPNE4-203ENST00000503204 RPL39LQ96EH5 51 aaKnown RBP2.73□□□□□ -1.97
CPNE4-203ENST00000503204 DMAC1Q96GE9 116 aa2.73□□□□□ -1.97
CPNE4-203ENST00000503204 GAFA1Q96PS6 74 aa2.73□□□□□ -1.97
CPNE4-203ENST00000503204 ANKHD1Q8IWZ3 2542 aaKnown RBP2.73□□□□□ -1.97
CPNE4-203ENST00000503204 PKD1L1Q8TDX9 2849 aa2.73□□□□□ -1.97
CPNE4-203ENST00000503204 ZNF469Q96JG9 3925 aaPredicted RBP2.73□□□□□ -1.97
CPNE4-203ENST00000503204 RYR3Q15413 4870 aa2.73□□□□□ -1.97
CPNE4-203ENST00000503204 COL6A6A6NMZ7 2263 aa2.72□□□□□ -1.97
CPNE4-203ENST00000503204 VPS13CQ709C8 3753 aa2.72□□□□□ -1.97
CPNE4-203ENST00000503204 A0A1W2PNM2 257 aa2.72□□□□□ -1.97
CPNE4-203ENST00000503204 UQCR11O14957 56 aa2.72□□□□□ -1.97
CPNE4-203ENST00000503204 LINC00315P59091 139 aa2.72□□□□□ -1.97
CPNE4-203ENST00000503204 RPL39P62891 51 aaKnown RBP2.72□□□□□ -1.97
CPNE4-203ENST00000503204 KLK12Q9UKR0 248 aa2.72□□□□□ -1.97
CPNE4-203ENST00000503204 DCHS2Q6V1P9 2916 aa2.71□□□□□ -1.98
CPNE4-203ENST00000503204 IGKV2-28A0A075B6P5 120 aa2.71□□□□□ -1.98
CPNE4-203ENST00000503204 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.71□□□□□ -1.98
CPNE4-203ENST00000503204 TRGV4A0A0C4DH28 118 aa2.71□□□□□ -1.98
CPNE4-203ENST00000503204 I3L2K1 104 aa2.71□□□□□ -1.98
CPNE4-203ENST00000503204 IGKV1-17P01599 117 aa2.71□□□□□ -1.98
CPNE4-203ENST00000503204 IGKV2D-28P01615 120 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms