RNA–Protein interactions for RNA: ENST00000502998.1

CLCN3-203, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-203ENST00000502998 MGPP08493 103 aa4.36□□□□□ -1.71
CLCN3-203ENST00000502998 IGFL4Q6B9Z1 124 aa4.36□□□□□ -1.71
CLCN3-203ENST00000502998 NTM-AS1Q6ZSK4 140 aa4.36□□□□□ -1.71
CLCN3-203ENST00000502998 COX7B2Q8TF08 81 aa4.36□□□□□ -1.71
CLCN3-203ENST00000502998 RYR3Q15413 4870 aa4.36□□□□□ -1.71
CLCN3-203ENST00000502998 IGHV3OR16-8A0A075B7F1 116 aa4.35□□□□□ -1.71
CLCN3-203ENST00000502998 IGLV9-49A0A0B4J1Y8 123 aa4.35□□□□□ -1.71
CLCN3-203ENST00000502998 IGHV3-38A0A0C4DH36 116 aa4.35□□□□□ -1.71
CLCN3-203ENST00000502998 ETDCA0A1B0GVM5 59 aa4.35□□□□□ -1.71
CLCN3-203ENST00000502998 NDUFA4O00483 81 aa4.35□□□□□ -1.71
CLCN3-203ENST00000502998 ZFP36P26651 326 aaKnown RBP4.35□□□□□ -1.71
CLCN3-203ENST00000502998 WT1-ASQ06250 92 aa4.35□□□□□ -1.71
CLCN3-203ENST00000502998 Q6ZTI0 123 aa4.35□□□□□ -1.71
CLCN3-203ENST00000502998 ZFAND2AQ8N6M9 145 aa4.35□□□□□ -1.71
CLCN3-203ENST00000502998 FAM104AQ969W3 186 aa4.35□□□□□ -1.71
CLCN3-203ENST00000502998 WFDC10AQ9H1F0 79 aa4.35□□□□□ -1.71
CLCN3-203ENST00000502998 ZNF580Q9UK33 172 aa4.35□□□□□ -1.71
CLCN3-203ENST00000502998 IGHV3-53P01767 116 aa4.34□□□□□ -1.71
CLCN3-203ENST00000502998 KRTAP19-4Q3LI73 84 aa4.34□□□□□ -1.71
CLCN3-203ENST00000502998 Q8NAQ8 132 aa4.34□□□□□ -1.71
CLCN3-203ENST00000502998 DEFB108BQ8NET1 73 aa4.34□□□□□ -1.71
CLCN3-203ENST00000502998 A0A1W2PNM2 257 aa4.33□□□□□ -1.72
CLCN3-203ENST00000502998 SPAG11BQ08648 103 aa4.33□□□□□ -1.72
CLCN3-203ENST00000502998 SPAG11AQ6PDA7 123 aa4.33□□□□□ -1.72
CLCN3-203ENST00000502998 Q8TAT8 98 aa4.33□□□□□ -1.72
CLCN3-203ENST00000502998 TRGV2A0A075B6R0 118 aa4.32□□□□□ -1.72
CLCN3-203ENST00000502998 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.32□□□□□ -1.72
CLCN3-203ENST00000502998 IGHV1-3A0A0C4DH29 117 aa4.32□□□□□ -1.72
CLCN3-203ENST00000502998 IGHV3-64DA0A0J9YX35 117 aa4.32□□□□□ -1.72
CLCN3-203ENST00000502998 DNAJC9-AS1A6NH13 148 aa4.32□□□□□ -1.72
CLCN3-203ENST00000502998 IGHV1-8P0DP01 117 aa4.32□□□□□ -1.72
CLCN3-203ENST00000502998 GAFA1Q96PS6 74 aa4.32□□□□□ -1.72
CLCN3-203ENST00000502998 C11orf21Q9P2W6 132 aa4.32□□□□□ -1.72
CLCN3-203ENST00000502998 TENM3Q9P273 2699 aa4.31□□□□□ -1.72
CLCN3-203ENST00000502998 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.31□□□□□ -1.72
CLCN3-203ENST00000502998 IGKV2-28A0A075B6P5 120 aa4.31□□□□□ -1.72
CLCN3-203ENST00000502998 IGKV2D-28P01615 120 aa4.31□□□□□ -1.72
CLCN3-203ENST00000502998 SLPIP03973 132 aa4.31□□□□□ -1.72
CLCN3-203ENST00000502998 IGHV4-38-2P0DP08 117 aa4.31□□□□□ -1.72
CLCN3-203ENST00000502998 LINC00315P59091 139 aa4.31□□□□□ -1.72
CLCN3-203ENST00000502998 SUMO4Q6EEV6 95 aa4.31□□□□□ -1.72
CLCN3-203ENST00000502998 C9orf47Q6ZRZ4 202 aa4.31□□□□□ -1.72
CLCN3-203ENST00000502998 ADM2Q7Z4H4 148 aa4.31□□□□□ -1.72
CLCN3-203ENST00000502998 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.31□□□□□ -1.72
CLCN3-203ENST00000502998 CLPSL1A2RUU4 121 aa4.3□□□□□ -1.72
CLCN3-203ENST00000502998 RNASE1P07998 156 aaKnown RBP4.3□□□□□ -1.72
CLCN3-203ENST00000502998 KPRPQ5T749 579 aaPredicted RBP4.3□□□□□ -1.72
CLCN3-203ENST00000502998 CSAG1Q6PB30 78 aa4.3□□□□□ -1.72
CLCN3-203ENST00000502998 LYPD2Q6UXB3 125 aa4.3□□□□□ -1.72
CLCN3-203ENST00000502998 Q8NDZ9 215 aa4.3□□□□□ -1.72
CLCN3-203ENST00000502998 MUC7Q8TAX7 377 aa4.3□□□□□ -1.72
CLCN3-203ENST00000502998 LEAP2Q969E1 77 aa4.3□□□□□ -1.72
CLCN3-203ENST00000502998 KCNQ1DNQ9H478 68 aa4.3□□□□□ -1.72
CLCN3-203ENST00000502998 TNCP24821 2201 aa4.29□□□□□ -1.72
CLCN3-203ENST00000502998 IGLV4-60A0A075B6I1 120 aa4.29□□□□□ -1.72
CLCN3-203ENST00000502998 H0Y9P7 68 aa4.29□□□□□ -1.72
CLCN3-203ENST00000502998 IGKV1-17P01599 117 aa4.29□□□□□ -1.72
CLCN3-203ENST00000502998 IGLV1-47P01700 117 aa4.29□□□□□ -1.72
CLCN3-203ENST00000502998 CGB3P0DN86 165 aa4.29□□□□□ -1.72
CLCN3-203ENST00000502998 CGB7P0DN87 165 aa4.29□□□□□ -1.72
CLCN3-203ENST00000502998 MIR22HGQ0VDD5 57 aa4.29□□□□□ -1.72
CLCN3-203ENST00000502998 DEFB112Q30KQ8 113 aa4.29□□□□□ -1.72
CLCN3-203ENST00000502998 HIGD2BQ4VC39 106 aa4.29□□□□□ -1.72
CLCN3-203ENST00000502998 BRD3OSQ6XYD6 125 aa4.29□□□□□ -1.72
CLCN3-203ENST00000502998 IGHV7-81A0A0B4J1V7 117 aa4.28□□□□□ -1.72
CLCN3-203ENST00000502998 TRBV6-4A0A1B0GX49 114 aa4.28□□□□□ -1.72
CLCN3-203ENST00000502998 I3L2K1 104 aa4.28□□□□□ -1.72
CLCN3-203ENST00000502998 CHTF8P0CG12 524 aa4.28□□□□□ -1.72
CLCN3-203ENST00000502998 SPINK7P58062 85 aa4.28□□□□□ -1.72
CLCN3-203ENST00000502998 Q6YL49 198 aa4.28□□□□□ -1.72
CLCN3-203ENST00000502998 A0A087WSZ3 146 aa4.27□□□□□ -1.73
CLCN3-203ENST00000502998 IGHV3-74A0A0B4J1X5 117 aa4.27□□□□□ -1.73
CLCN3-203ENST00000502998 SRRM5B3KS81 715 aa4.27□□□□□ -1.73
CLCN3-203ENST00000502998 COX7BP24311 80 aa4.27□□□□□ -1.73
CLCN3-203ENST00000502998 REG3GQ6UW15 175 aa4.27□□□□□ -1.73
CLCN3-203ENST00000502998 Q6ZR54 194 aa4.27□□□□□ -1.73
CLCN3-203ENST00000502998 COA5Q86WW8 74 aa4.27□□□□□ -1.73
CLCN3-203ENST00000502998 NPBQ8NG41 125 aa4.27□□□□□ -1.73
CLCN3-203ENST00000502998 IGHV3-11P01762 117 aa4.26□□□□□ -1.73
CLCN3-203ENST00000502998 IGHV4-59P01825 116 aa4.26□□□□□ -1.73
CLCN3-203ENST00000502998 COX7A1P24310 79 aa4.26□□□□□ -1.73
CLCN3-203ENST00000502998 SMIM29Q86T20 159 aa4.26□□□□□ -1.73
CLCN3-203ENST00000502998 LINC01006Q8NI28 216 aa4.26□□□□□ -1.73
CLCN3-203ENST00000502998 CDKN2A-AS1Q9UH64 79 aa4.26□□□□□ -1.73
CLCN3-203ENST00000502998 IGHV3-21A0A0B4J1V1 117 aa4.25□□□□□ -1.73
CLCN3-203ENST00000502998 K7ERS5 55 aa4.25□□□□□ -1.73
CLCN3-203ENST00000502998 M0QY20 66 aa4.25□□□□□ -1.73
CLCN3-203ENST00000502998 KRTAP10-3P60369 221 aa4.25□□□□□ -1.73
CLCN3-203ENST00000502998 C17orf58Q2M2W7 97 aa4.25□□□□□ -1.73
CLCN3-203ENST00000502998 KRTAP9-3Q9BYQ3 159 aa4.25□□□□□ -1.73
CLCN3-203ENST00000502998 KAAG1Q9UBP8 84 aa4.25□□□□□ -1.73
CLCN3-203ENST00000502998 SMIM1B2RUZ4 78 aa4.24□□□□□ -1.73
CLCN3-203ENST00000502998 IGLV2-23P01705 113 aa4.24□□□□□ -1.73
CLCN3-203ENST00000502998 CCL18P55774 89 aa4.24□□□□□ -1.73
CLCN3-203ENST00000502998 PRB3Q04118 309 aaPredicted RBP4.24□□□□□ -1.73
CLCN3-203ENST00000502998 PRR4Q16378 134 aa4.24□□□□□ -1.73
CLCN3-203ENST00000502998 LINC00575Q6W349 94 aa4.24□□□□□ -1.73
CLCN3-203ENST00000502998 EPPK1P58107 5090 aaKnown RBP4.24□□□□□ -1.73
CLCN3-203ENST00000502998 COL7A1Q02388 2944 aa4.23□□□□□ -1.73
CLCN3-203ENST00000502998 IGHV4-28A0A0C4DH34 117 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms