RNA–Protein interactions for RNA: ENST00000502639.1

CDC42SE2-204, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-204ENST00000502639 PTPN23Q9H3S7 1636 aa-0.61□□□□□ -2.51
CDC42SE2-204ENST00000502639 C5orf42Q9H799 3197 aa-0.61□□□□□ -2.51
CDC42SE2-204ENST00000502639 COL14A1Q05707 1796 aaKnown RBP-0.62□□□□□ -2.51
CDC42SE2-204ENST00000502639 I3L3M4 83 aa-0.62□□□□□ -2.51
CDC42SE2-204ENST00000502639 GNGT2O14610 69 aa-0.62□□□□□ -2.51
CDC42SE2-204ENST00000502639 MT1AP04731 61 aa-0.62□□□□□ -2.51
CDC42SE2-204ENST00000502639 NKTRP30414 1462 aaKnown RBP-0.62□□□□□ -2.51
CDC42SE2-204ENST00000502639 CCDC141Q6ZP82 1450 aa-0.62□□□□□ -2.51
CDC42SE2-204ENST00000502639 TROQ12816 1431 aaPredicted RBP-0.63□□□□□ -2.51
CDC42SE2-204ENST00000502639 DMXL2Q8TDJ6 3036 aa-0.63□□□□□ -2.51
CDC42SE2-204ENST00000502639 C20orf202A1L168 122 aa-0.63□□□□□ -2.51
CDC42SE2-204ENST00000502639 H0YGG7 62 aa-0.63□□□□□ -2.51
CDC42SE2-204ENST00000502639 MT-ATP8P03928 68 aa-0.63□□□□□ -2.51
CDC42SE2-204ENST00000502639 KRTDAPP60985 99 aa-0.63□□□□□ -2.51
CDC42SE2-204ENST00000502639 MRPS10P82664 201 aaKnown RBP-0.63□□□□□ -2.51
CDC42SE2-204ENST00000502639 ZFYVE16Q7Z3T8 1539 aa-0.64□□□□□ -2.51
CDC42SE2-204ENST00000502639 H0Y9P7 68 aa-0.65□□□□□ -2.51
CDC42SE2-204ENST00000502639 H3BNG1 76 aa-0.65□□□□□ -2.51
CDC42SE2-204ENST00000502639 H7BZZ5 65 aa-0.65□□□□□ -2.51
CDC42SE2-204ENST00000502639 PSMG4Q5JS54 123 aa-0.65□□□□□ -2.51
CDC42SE2-204ENST00000502639 HEPN1Q6WQI6 88 aa-0.65□□□□□ -2.51
CDC42SE2-204ENST00000502639 C14orf144Q96I85 54 aa-0.65□□□□□ -2.51
CDC42SE2-204ENST00000502639 KIAA1551Q9HCM1 1747 aa-0.65□□□□□ -2.51
CDC42SE2-204ENST00000502639 TARBP1Q13395 1621 aaKnown RBP-0.65□□□□□ -2.51
CDC42SE2-204ENST00000502639 BOD1L1Q8NFC6 3051 aa-0.66□□□□□ -2.51
CDC42SE2-204ENST00000502639 NRXN1Q9ULB1 1477 aa-0.66□□□□□ -2.51
CDC42SE2-204ENST00000502639 LRRC37AA6NMS7 1700 aa-0.66□□□□□ -2.51
CDC42SE2-204ENST00000502639 TRBV25-1A0A075B6N4 114 aa-0.66□□□□□ -2.52
CDC42SE2-204ENST00000502639 TRAV30A0A087WSZ9 112 aa-0.66□□□□□ -2.52
CDC42SE2-204ENST00000502639 TRGV9Q99603 122 aa-0.66□□□□□ -2.52
CDC42SE2-204ENST00000502639 RGPD2P0DJD1 1756 aa-0.66□□□□□ -2.52
CDC42SE2-204ENST00000502639 DYNC1H1Q14204 4646 aaKnown RBP-0.66□□□□□ -2.52
CDC42SE2-204ENST00000502639 CHD7Q9P2D1 2997 aa-0.66□□□□□ -2.52
CDC42SE2-204ENST00000502639 MLH3Q9UHC1 1453 aa-0.67□□□□□ -2.52
CDC42SE2-204ENST00000502639 SMG1Q96Q15 3661 aaKnown RBP-0.67□□□□□ -2.52
CDC42SE2-204ENST00000502639 CSMD1Q96PZ7 3565 aa-0.67□□□□□ -2.52
CDC42SE2-204ENST00000502639 CICQ96RK0 1608 aaPredicted RBP-0.67□□□□□ -2.52
CDC42SE2-204ENST00000502639 ANKRD36BQ8N2N9 1353 aa-0.67□□□□□ -2.52
CDC42SE2-204ENST00000502639 H3BQF6 201 aa-0.67□□□□□ -2.52
CDC42SE2-204ENST00000502639 CCL22O00626 93 aa-0.67□□□□□ -2.52
CDC42SE2-204ENST00000502639 S100A10P60903 97 aa-0.67□□□□□ -2.52
CDC42SE2-204ENST00000502639 GNGT1P63211 74 aa-0.67□□□□□ -2.52
CDC42SE2-204ENST00000502639 WFDC13Q8IUB5 93 aa-0.67□□□□□ -2.52
CDC42SE2-204ENST00000502639 MRPL34Q9BQ48 92 aaKnown RBP-0.67□□□□□ -2.52
CDC42SE2-204ENST00000502639 VAMP8Q9BV40 100 aa-0.67□□□□□ -2.52
CDC42SE2-204ENST00000502639 CDKN2A-AS1Q9UH64 79 aa-0.67□□□□□ -2.52
CDC42SE2-204ENST00000502639 EDC4Q6P2E9 1401 aaKnown RBP-0.67□□□□□ -2.52
CDC42SE2-204ENST00000502639 NCOA3Q9Y6Q9 1424 aa-0.67□□□□□ -2.52
CDC42SE2-204ENST00000502639 BCORQ6W2J9 1755 aa-0.68□□□□□ -2.52
CDC42SE2-204ENST00000502639 PRDM15P57071 1507 aaPredicted RBP-0.68□□□□□ -2.52
CDC42SE2-204ENST00000502639 FAM135AQ9P2D6 1515 aa-0.68□□□□□ -2.52
CDC42SE2-204ENST00000502639 ATP6V1G2-DDX39BF2Z307 99 aa-0.68□□□□□ -2.52
CDC42SE2-204ENST00000502639 PMCHL1Q16048 86 aa-0.68□□□□□ -2.52
CDC42SE2-204ENST00000502639 PMCHL2Q9BQD1 86 aa-0.68□□□□□ -2.52
CDC42SE2-204ENST00000502639 HIGD1BQ9P298 99 aa-0.68□□□□□ -2.52
CDC42SE2-204ENST00000502639 TRRAPQ9Y4A5 3859 aa-0.68□□□□□ -2.52
CDC42SE2-204ENST00000502639 LRBAP50851 2863 aa-0.68□□□□□ -2.52
CDC42SE2-204ENST00000502639 KIF20BQ96Q89 1820 aa-0.68□□□□□ -2.52
CDC42SE2-204ENST00000502639 ZFHX4Q86UP3 3567 aa-0.69□□□□□ -2.52
CDC42SE2-204ENST00000502639 ANKRD50Q9ULJ7 1429 aa-0.69□□□□□ -2.52
CDC42SE2-204ENST00000502639 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.69□□□□□ -2.52
CDC42SE2-204ENST00000502639 ARMS2P0C7Q2 107 aa-0.69□□□□□ -2.52
CDC42SE2-204ENST00000502639 SHPRHQ149N8 1683 aa-0.69□□□□□ -2.52
CDC42SE2-204ENST00000502639 CUX1P39880 1505 aa-0.69□□□□□ -2.52
CDC42SE2-204ENST00000502639 MON2Q7Z3U7 1717 aa-0.69□□□□□ -2.52
CDC42SE2-204ENST00000502639 CSMD2Q7Z408 3487 aa-0.7□□□□□ -2.52
CDC42SE2-204ENST00000502639 CLIP1P30622 1438 aa-0.7□□□□□ -2.52
CDC42SE2-204ENST00000502639 SPTY2D1-AS1A0A0U1RR47 76 aa-0.7□□□□□ -2.52
CDC42SE2-204ENST00000502639 TMEM218A2RU14 115 aa-0.7□□□□□ -2.52
CDC42SE2-204ENST00000502639 MPC2O95563 127 aa-0.7□□□□□ -2.52
CDC42SE2-204ENST00000502639 PSENENQ9NZ42 101 aa-0.7□□□□□ -2.52
CDC42SE2-204ENST00000502639 DNAH17Q9UFH2 4485 aa-0.71□□□□□ -2.52
CDC42SE2-204ENST00000502639 LOC400499M0QZD8 3231 aa-0.71□□□□□ -2.52
CDC42SE2-204ENST00000502639 C4AP0C0L4 1744 aa-0.71□□□□□ -2.52
CDC42SE2-204ENST00000502639 C4BP0C0L5 1744 aa-0.71□□□□□ -2.52
CDC42SE2-204ENST00000502639 TRBV7-7A0A0K0K1E9 115 aa-0.71□□□□□ -2.52
CDC42SE2-204ENST00000502639 C9orf92A6NGG3 77 aa-0.71□□□□□ -2.52
CDC42SE2-204ENST00000502639 NDUFC1O43677 76 aa-0.71□□□□□ -2.52
CDC42SE2-204ENST00000502639 UQCRHP07919 91 aa-0.71□□□□□ -2.52
CDC42SE2-204ENST00000502639 S100PP25815 95 aa-0.71□□□□□ -2.52
CDC42SE2-204ENST00000502639 DEFA5Q01523 94 aa-0.71□□□□□ -2.52
CDC42SE2-204ENST00000502639 SPEGQ15772 3267 aa-0.71□□□□□ -2.52
CDC42SE2-204ENST00000502639 EYSQ5T1H1 3165 aa-0.71□□□□□ -2.52
CDC42SE2-204ENST00000502639 C5P01031 1676 aa-0.72□□□□□ -2.52
CDC42SE2-204ENST00000502639 ADGRG4Q8IZF6 3080 aa-0.72□□□□□ -2.52
CDC42SE2-204ENST00000502639 SERP2Q8N6R1 65 aa-0.72□□□□□ -2.52
CDC42SE2-204ENST00000502639 MT1HP80294 61 aa-0.73□□□□□ -2.53
CDC42SE2-204ENST00000502639 AP4S1Q9Y587 144 aa-0.73□□□□□ -2.53
CDC42SE2-204ENST00000502639 SCN11AQ9UI33 1791 aa-0.73□□□□□ -2.53
CDC42SE2-204ENST00000502639 UBR3Q6ZT12 1888 aa-0.73□□□□□ -2.53
CDC42SE2-204ENST00000502639 SPTAN1Q13813 2472 aaKnown RBP-0.74□□□□□ -2.53
CDC42SE2-204ENST00000502639 SAMD9Q5K651 1589 aa-0.74□□□□□ -2.53
CDC42SE2-204ENST00000502639 ALKQ9UM73 1620 aa-0.74□□□□□ -2.53
CDC42SE2-204ENST00000502639 MGAQ8IWI9 3026 aa-0.74□□□□□ -2.53
CDC42SE2-204ENST00000502639 PREX1Q8TCU6 1659 aa-0.74□□□□□ -2.53
CDC42SE2-204ENST00000502639 DNAH5Q8TE73 4624 aa-0.74□□□□□ -2.53
CDC42SE2-204ENST00000502639 QSER1Q2KHR3 1735 aa-0.74□□□□□ -2.53
CDC42SE2-204ENST00000502639 IGLC2P0DOY2 106 aa-0.74□□□□□ -2.53
CDC42SE2-204ENST00000502639 IGLC3P0DOY3 106 aa-0.74□□□□□ -2.53
CDC42SE2-204ENST00000502639 NMSQ5H8A3 153 aa-0.74□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms