RNA–Protein interactions for RNA: ENST00000498463.5

SNX13-212, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 687 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-212ENST00000498463 KRTAP5-11Q6L8G4 156 aa3.88□□□□□ -1.79
SNX13-212ENST00000498463 CR1P17927 2039 aa3.87□□□□□ -1.79
SNX13-212ENST00000498463 A0A1B0GU69 56 aa3.87□□□□□ -1.79
SNX13-212ENST00000498463 DEFB133Q30KQ1 61 aa3.87□□□□□ -1.79
SNX13-212ENST00000498463 LINC00959A0A1B0GUT2 108 aa3.86□□□□□ -1.79
SNX13-212ENST00000498463 PRB1P04280 392 aa3.86□□□□□ -1.79
SNX13-212ENST00000498463 ACYP2P14621 99 aa3.86□□□□□ -1.79
SNX13-212ENST00000498463 RHPN1-AS1Q9BWJ2 59 aa3.86□□□□□ -1.79
SNX13-212ENST00000498463 SPTBN5Q9NRC6 3674 aaKnown RBP3.85□□□□□ -1.79
SNX13-212ENST00000498463 KIAA0100Q14667 2235 aaKnown RBP3.85□□□□□ -1.79
SNX13-212ENST00000498463 CACNA1AO00555 2505 aa3.84□□□□□ -1.79
SNX13-212ENST00000498463 GVQW2A0A096LPI5 108 aaPredicted RBP3.84□□□□□ -1.79
SNX13-212ENST00000498463 DEFB113Q30KQ7 82 aa3.84□□□□□ -1.79
SNX13-212ENST00000498463 LAMA3Q16787 3333 aa3.84□□□□□ -1.79
SNX13-212ENST00000498463 LAMA2P24043 3122 aaKnown RBP3.84□□□□□ -1.8
SNX13-212ENST00000498463 NUPR2A6NF83 97 aa3.83□□□□□ -1.8
SNX13-212ENST00000498463 A8MTW9 85 aa3.83□□□□□ -1.8
SNX13-212ENST00000498463 K7EQZ3 153 aa3.83□□□□□ -1.8
SNX13-212ENST00000498463 CDH23Q9H251 3354 aa3.82□□□□□ -1.8
SNX13-212ENST00000498463 ICE1Q9Y2F5 2266 aa3.82□□□□□ -1.8
SNX13-212ENST00000498463 KRTAP10-1P60331 282 aa3.82□□□□□ -1.8
SNX13-212ENST00000498463 UNC79Q9P2D8 2635 aa3.8□□□□□ -1.8
SNX13-212ENST00000498463 PTPRQQ9UMZ3 2332 aa3.8□□□□□ -1.8
SNX13-212ENST00000498463 TRGV1A0A0A0MS02 117 aa3.8□□□□□ -1.8
SNX13-212ENST00000498463 DEFB131AP59861 70 aa3.8□□□□□ -1.8
SNX13-212ENST00000498463 SPINK13Q1W4C9 94 aa3.8□□□□□ -1.8
SNX13-212ENST00000498463 CHD7Q9P2D1 2997 aa3.79□□□□□ -1.8
SNX13-212ENST00000498463 ASCC3Q8N3C0 2202 aaKnown RBP3.79□□□□□ -1.8
SNX13-212ENST00000498463 CACNA1GO43497 2377 aa3.78□□□□□ -1.8
SNX13-212ENST00000498463 BRWD1Q9NSI6 2320 aa3.78□□□□□ -1.8
SNX13-212ENST00000498463 CHD9Q3L8U1 2897 aa3.78□□□□□ -1.8
SNX13-212ENST00000498463 ANGP03950 147 aaKnown RBP3.78□□□□□ -1.8
SNX13-212ENST00000498463 WFDC13Q8IUB5 93 aa3.78□□□□□ -1.8
SNX13-212ENST00000498463 REV3LO60673 3130 aa3.78□□□□□ -1.8
SNX13-212ENST00000498463 URB1O60287 2271 aaKnown RBP3.78□□□□□ -1.8
SNX13-212ENST00000498463 IGKV3-7A0A075B6H7 116 aa3.77□□□□□ -1.81
SNX13-212ENST00000498463 Q6ZRN7 208 aaPredicted RBP3.77□□□□□ -1.81
SNX13-212ENST00000498463 WFDC10BQ8IUB3 73 aa3.77□□□□□ -1.81
SNX13-212ENST00000498463 LYNX1G3V0Z9 82 aa3.76□□□□□ -1.81
SNX13-212ENST00000498463 SZT2Q5T011 3432 aa3.76□□□□□ -1.81
SNX13-212ENST00000498463 PRRC2BQ5JSZ5 2229 aaKnown RBP3.76□□□□□ -1.81
SNX13-212ENST00000498463 RANBP2P49792 3224 aaKnown RBP3.75□□□□□ -1.81
SNX13-212ENST00000498463 DEFB103AP81534 67 aa3.75□□□□□ -1.81
SNX13-212ENST00000498463 C4orf3Q8WVX3 66 aa3.75□□□□□ -1.81
SNX13-212ENST00000498463 SORL1Q92673 2214 aa3.75□□□□□ -1.81
SNX13-212ENST00000498463 XIRP2A4UGR9 3374 aa3.74□□□□□ -1.81
SNX13-212ENST00000498463 KRTAP26-1Q6PEX3 210 aa3.74□□□□□ -1.81
SNX13-212ENST00000498463 C6orf48Q9UBA6 75 aa3.74□□□□□ -1.81
SNX13-212ENST00000498463 A0A0C4DFX4 3053 aa3.74□□□□□ -1.81
SNX13-212ENST00000498463 IGKV3OR2-268A0A0C4DH90 116 aa3.73□□□□□ -1.81
SNX13-212ENST00000498463 HTN1P15515 57 aa3.73□□□□□ -1.81
SNX13-212ENST00000498463 C5orf56Q8N8D9 126 aa3.73□□□□□ -1.81
SNX13-212ENST00000498463 ZFHX3Q15911 3703 aa3.73□□□□□ -1.81
SNX13-212ENST00000498463 TRANK1O15050 2925 aa3.73□□□□□ -1.81
SNX13-212ENST00000498463 EYSQ5T1H1 3165 aa3.73□□□□□ -1.81
SNX13-212ENST00000498463 FN1P02751 2386 aaKnown RBP3.73□□□□□ -1.81
SNX13-212ENST00000498463 C5orf42Q9H799 3197 aa3.72□□□□□ -1.81
SNX13-212ENST00000498463 TNRC18O15417 2968 aaPredicted RBP3.72□□□□□ -1.81
SNX13-212ENST00000498463 MED13LQ71F56 2210 aa3.72□□□□□ -1.81
SNX13-212ENST00000498463 PLCE1Q9P212 2302 aa3.72□□□□□ -1.81
SNX13-212ENST00000498463 UNC80Q8N2C7 3258 aa3.72□□□□□ -1.81
SNX13-212ENST00000498463 ABCA1O95477 2261 aa3.72□□□□□ -1.81
SNX13-212ENST00000498463 KNL1Q8NG31 2342 aa3.71□□□□□ -1.82
SNX13-212ENST00000498463 G3V318 75 aa3.71□□□□□ -1.82
SNX13-212ENST00000498463 H3BUX3 64 aa3.71□□□□□ -1.82
SNX13-212ENST00000498463 DEFB1P60022 68 aa3.71□□□□□ -1.82
SNX13-212ENST00000498463 PCOTHQ58A44 107 aa3.71□□□□□ -1.82
SNX13-212ENST00000498463 PKD1L2Q7Z442 2459 aa3.7□□□□□ -1.82
SNX13-212ENST00000498463 ASXL3Q9C0F0 2248 aa3.69□□□□□ -1.82
SNX13-212ENST00000498463 KRTAP13-4Q3LI77 160 aa3.69□□□□□ -1.82
SNX13-212ENST00000498463 PRO3102Q9H379 93 aa3.69□□□□□ -1.82
SNX13-212ENST00000498463 Q6ZRX8 168 aa3.68□□□□□ -1.82
SNX13-212ENST00000498463 DEFB105AQ8NG35 78 aa3.68□□□□□ -1.82
SNX13-212ENST00000498463 USP34Q70CQ2 3546 aa3.67□□□□□ -1.82
SNX13-212ENST00000498463 CCL19Q99731 98 aa3.67□□□□□ -1.82
SNX13-212ENST00000498463 LINC00472Q9H8W2 130 aa3.67□□□□□ -1.82
SNX13-212ENST00000498463 DNAH14Q0VDD8 3507 aa3.66□□□□□ -1.82
SNX13-212ENST00000498463 TRIOBPQ9H2D6 2365 aa3.65□□□□□ -1.83
SNX13-212ENST00000498463 DEFB109BQ30KR1 87 aa3.65□□□□□ -1.83
SNX13-212ENST00000498463 KRTAP6-3Q3LI67 103 aa3.65□□□□□ -1.83
SNX13-212ENST00000498463 UNQ6190/PRO20217Q6UXQ8 127 aa3.65□□□□□ -1.83
SNX13-212ENST00000498463 BAHCC1Q9P281 2608 aa3.64□□□□□ -1.83
SNX13-212ENST00000498463 KMT2BQ9UMN6 2715 aaPredicted RBP3.64□□□□□ -1.83
SNX13-212ENST00000498463 MMP24-AS1A0A0U1RRL7 71 aa3.64□□□□□ -1.83
SNX13-212ENST00000498463 LY6G6CO95867 125 aa3.64□□□□□ -1.83
SNX13-212ENST00000498463 CEP290O15078 2479 aa3.64□□□□□ -1.83
SNX13-212ENST00000498463 PRUNE2Q8WUY3 3088 aa3.63□□□□□ -1.83
SNX13-212ENST00000498463 U3KQA8 63 aa3.63□□□□□ -1.83
SNX13-212ENST00000498463 WNK2Q9Y3S1 2297 aa3.63□□□□□ -1.83
SNX13-212ENST00000498463 MYO15AQ9UKN7 3530 aa3.62□□□□□ -1.83
SNX13-212ENST00000498463 SPRR1AP35321 89 aa3.62□□□□□ -1.83
SNX13-212ENST00000498463 DEFB123Q8N688 67 aa3.62□□□□□ -1.83
SNX13-212ENST00000498463 DMDP11532 3685 aa3.62□□□□□ -1.83
SNX13-212ENST00000498463 SDK1Q7Z5N4 2213 aa3.61□□□□□ -1.83
SNX13-212ENST00000498463 RPL37AP61513 92 aaKnown RBP3.61□□□□□ -1.83
SNX13-212ENST00000498463 CLPSL2Q6UWE3 100 aa3.61□□□□□ -1.83
SNX13-212ENST00000498463 MRPL34Q9BQ48 92 aaKnown RBP3.61□□□□□ -1.83
SNX13-212ENST00000498463 ABCA4P78363 2273 aa3.61□□□□□ -1.83
SNX13-212ENST00000498463 DOPEY2Q9Y3R5 2298 aa3.6□□□□□ -1.83
SNX13-212ENST00000498463 A0A087WTM6 91 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms