RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 MACF1Q9UPN3 7388 aaKnown RBP6.14□□□□□ -1.43
CDK9-205ENST00000498339 C5orf52A6NGY3 159 aa6.13□□□□□ -1.43
CDK9-205ENST00000498339 Q1RN00 199 aa6.12□□□□□ -1.43
CDK9-205ENST00000498339 SYNE2Q8WXH0 6885 aaKnown RBP6.11□□□□□ -1.43
CDK9-205ENST00000498339 TRAV12-1A0A0B4J245 112 aa6.11□□□□□ -1.43
CDK9-205ENST00000498339 LOC107984156A0A0G2JMH3 177 aa6.11□□□□□ -1.43
CDK9-205ENST00000498339 SPRR1BP22528 89 aa6.11□□□□□ -1.43
CDK9-205ENST00000498339 NPC2P61916 151 aa6.11□□□□□ -1.43
CDK9-205ENST00000498339 CD164Q04900 197 aa6.11□□□□□ -1.43
CDK9-205ENST00000498339 ARL17AQ8IVW1 177 aa6.11□□□□□ -1.43
CDK9-205ENST00000498339 IFI27L1Q96BM0 104 aa6.11□□□□□ -1.43
CDK9-205ENST00000498339 PRO1933Q9H354 126 aa6.11□□□□□ -1.43
CDK9-205ENST00000498339 NDUFC2O95298 119 aa6.1□□□□□ -1.43
CDK9-205ENST00000498339 C1orf195Q5TG92 126 aa6.1□□□□□ -1.43
CDK9-205ENST00000498339 CBY1Q9Y3M2 126 aa6.1□□□□□ -1.43
CDK9-205ENST00000498339 H0Y8G0 127 aa6.09□□□□□ -1.43
CDK9-205ENST00000498339 TSPEAR-AS2P59090 65 aa6.09□□□□□ -1.43
CDK9-205ENST00000498339 DEFB105AQ8NG35 78 aa6.09□□□□□ -1.43
CDK9-205ENST00000498339 RPS10P5Q9NQ39 176 aa6.09□□□□□ -1.43
CDK9-205ENST00000498339 DHRS4-AS1Q9P1J3 65 aa6.09□□□□□ -1.43
CDK9-205ENST00000498339 TRAPPC1Q9Y5R8 145 aa6.09□□□□□ -1.43
CDK9-205ENST00000498339 IFITM2Q01629 132 aa6.08□□□□□ -1.44
CDK9-205ENST00000498339 TAL2Q16559 108 aa6.08□□□□□ -1.44
CDK9-205ENST00000498339 LEPROTO15243 131 aa6.07□□□□□ -1.44
CDK9-205ENST00000498339 OR13C6PQ8NH95 151 aa6.07□□□□□ -1.44
CDK9-205ENST00000498339 AKR1D1P51857 326 aa6.06□□□□□ -1.44
CDK9-205ENST00000498339 ATP11AUNQ6ZP68 121 aa6.06□□□□□ -1.44
CDK9-205ENST00000498339 SMIM29Q86T20 159 aa6.06□□□□□ -1.44
CDK9-205ENST00000498339 KRTAP19-1Q8IUB9 90 aa6.06□□□□□ -1.44
CDK9-205ENST00000498339 KRTAP9-8Q9BYQ0 159 aa6.06□□□□□ -1.44
CDK9-205ENST00000498339 J3QQQ9 107 aa6.05□□□□□ -1.44
CDK9-205ENST00000498339 LGALS3P17931 250 aaKnown RBP6.05□□□□□ -1.44
CDK9-205ENST00000498339 Q5XG85 94 aa6.05□□□□□ -1.44
CDK9-205ENST00000498339 TMEM218A2RU14 115 aa6.04□□□□□ -1.44
CDK9-205ENST00000498339 RHEBQ15382 184 aa6.04□□□□□ -1.44
CDK9-205ENST00000498339 SOSTDC1Q6X4U4 206 aa6.04□□□□□ -1.44
CDK9-205ENST00000498339 A0A0G2JQZ4 141 aa6.03□□□□□ -1.44
CDK9-205ENST00000498339 TEX49A0A1B0GTD5 131 aa6.03□□□□□ -1.44
CDK9-205ENST00000498339 NMUP48645 174 aa6.03□□□□□ -1.44
CDK9-205ENST00000498339 HERVK_113P61574 105 aa6.03□□□□□ -1.44
CDK9-205ENST00000498339 PCP2Q8IVA1 136 aa6.03□□□□□ -1.44
CDK9-205ENST00000498339 C20orf202A1L168 122 aa6.02□□□□□ -1.45
CDK9-205ENST00000498339 TCL1BO95988 128 aa6.02□□□□□ -1.45
CDK9-205ENST00000498339 COX7BP24311 80 aa6.02□□□□□ -1.45
CDK9-205ENST00000498339 UQCC3Q6UW78 93 aa6.02□□□□□ -1.45
CDK9-205ENST00000498339 CHCHD1Q96BP2 118 aaKnown RBP6.02□□□□□ -1.45
CDK9-205ENST00000498339 EIF4EBP3O60516 100 aaPredicted RBP6.01□□□□□ -1.45
CDK9-205ENST00000498339 PLNP26678 52 aa6□□□□□ -1.45
CDK9-205ENST00000498339 ELOF1P60002 83 aaKnown RBP6□□□□□ -1.45
CDK9-205ENST00000498339 HSBP1O75506 76 aa5.99□□□□□ -1.45
CDK9-205ENST00000498339 C6orf99Q4VX62 202 aa5.99□□□□□ -1.45
CDK9-205ENST00000498339 ADAMTSL4-AS1Q5T5F5 129 aa5.99□□□□□ -1.45
CDK9-205ENST00000498339 OBSCN-AS1Q96MR7 158 aa5.99□□□□□ -1.45
CDK9-205ENST00000498339 SPANXCQ9NY87 97 aa5.99□□□□□ -1.45
CDK9-205ENST00000498339 TRBV20-1A0A075B6N2 111 aa5.98□□□□□ -1.45
CDK9-205ENST00000498339 CLLU1Q5K131 121 aa5.98□□□□□ -1.45
CDK9-205ENST00000498339 Q75L30 129 aa5.98□□□□□ -1.45
CDK9-205ENST00000498339 A0A0J9YXY3 114 aa5.97□□□□□ -1.45
CDK9-205ENST00000498339 SPANXDQ9BXN6 97 aa5.97□□□□□ -1.45
CDK9-205ENST00000498339 LCE2BO14633 110 aa5.96□□□□□ -1.46
CDK9-205ENST00000498339 DPM2O94777 84 aa5.96□□□□□ -1.46
CDK9-205ENST00000498339 MT2AP02795 61 aa5.96□□□□□ -1.46
CDK9-205ENST00000498339 PMCHL2Q9BQD1 86 aa5.96□□□□□ -1.46
CDK9-205ENST00000498339 C10orf91Q5T1B1 145 aa5.95□□□□□ -1.46
CDK9-205ENST00000498339 LINC00308Q8TCZ7 52 aa5.95□□□□□ -1.46
CDK9-205ENST00000498339 LINC00846Q9NV44 126 aa5.95□□□□□ -1.46
CDK9-205ENST00000498339 LEPROTL1O95214 131 aa5.94□□□□□ -1.46
CDK9-205ENST00000498339 IGKCP01834 107 aa5.94□□□□□ -1.46
CDK9-205ENST00000498339 FAM236DA0A1B0GTK5 79 aa5.93□□□□□ -1.46
CDK9-205ENST00000498339 F8WEM9 126 aa5.93□□□□□ -1.46
CDK9-205ENST00000498339 FAM236CP0DP71 79 aa5.93□□□□□ -1.46
CDK9-205ENST00000498339 IGLV5-48A0A075B6I7 105 aa5.92□□□□□ -1.46
CDK9-205ENST00000498339 MT1FP04733 61 aa5.92□□□□□ -1.46
CDK9-205ENST00000498339 KRTAP10-10P60014 251 aa5.92□□□□□ -1.46
CDK9-205ENST00000498339 A0A1B0GWB2 263 aa5.91□□□□□ -1.46
CDK9-205ENST00000498339 Q96NJ1 140 aa5.91□□□□□ -1.46
CDK9-205ENST00000498339 LINC00518Q8N0U6 118 aa5.9□□□□□ -1.46
CDK9-205ENST00000498339 HSPB8Q9UJY1 196 aa5.9□□□□□ -1.46
CDK9-205ENST00000498339 TRBV7-6A0A0J9YX20 115 aa5.89□□□□□ -1.47
CDK9-205ENST00000498339 E9PLD3 99 aa5.89□□□□□ -1.47
CDK9-205ENST00000498339 FABP4P15090 132 aa5.89□□□□□ -1.47
CDK9-205ENST00000498339 LITAFQ99732 161 aa5.88□□□□□ -1.47
CDK9-205ENST00000498339 KRTAP9-3Q9BYQ3 159 aa5.88□□□□□ -1.47
CDK9-205ENST00000498339 TIMM17BO60830 172 aa5.87□□□□□ -1.47
CDK9-205ENST00000498339 IGFL1Q6UW32 110 aa5.87□□□□□ -1.47
CDK9-205ENST00000498339 NHP2Q9NX24 153 aaKnown RBP5.87□□□□□ -1.47
CDK9-205ENST00000498339 TRBV7-7A0A0K0K1E9 115 aa5.86□□□□□ -1.47
CDK9-205ENST00000498339 A6NDN8 102 aa5.86□□□□□ -1.47
CDK9-205ENST00000498339 SERF1AO75920 110 aa5.86□□□□□ -1.47
CDK9-205ENST00000498339 C20orf166-AS1Q96NR2 134 aa5.86□□□□□ -1.47
CDK9-205ENST00000498339 ZNF815PA8K554 130 aa5.85□□□□□ -1.47
CDK9-205ENST00000498339 APOC3P02656 99 aa5.85□□□□□ -1.47
CDK9-205ENST00000498339 SLC7A5P1Q8MH63 180 aa5.85□□□□□ -1.47
CDK9-205ENST00000498339 CLEC2BQ92478 149 aa5.85□□□□□ -1.47
CDK9-205ENST00000498339 A4D1N5 150 aa5.84□□□□□ -1.47
CDK9-205ENST00000498339 LST1O00453 97 aa5.83□□□□□ -1.48
CDK9-205ENST00000498339 Q6JHZ5 121 aa5.83□□□□□ -1.48
CDK9-205ENST00000498339 SNAPINO95295 136 aa5.82□□□□□ -1.48
CDK9-205ENST00000498339 NDUFA5Q16718 116 aa5.82□□□□□ -1.48
CDK9-205ENST00000498339 RBM12B-AS1Q9P1G2 102 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms