RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 RPL13AP40429 203 aaKnown RBP10.97□□□□□ -0.65
PRKCB-209ENST00000498058 HSD52Q0P140 79 aa10.97□□□□□ -0.65
PRKCB-209ENST00000498058 MRPL55Q7Z7F7 128 aaKnown RBP10.97□□□□□ -0.65
PRKCB-209ENST00000498058 A0A087X002 238 aa10.95□□□□□ -0.66
PRKCB-209ENST00000498058 EIF4EBP3O60516 100 aaPredicted RBP10.95□□□□□ -0.66
PRKCB-209ENST00000498058 TMEM238LA0A1B0GVL6 79 aa10.94□□□□□ -0.66
PRKCB-209ENST00000498058 A6NJY4 79 aa10.94□□□□□ -0.66
PRKCB-209ENST00000498058 NCR3O14931 201 aa10.94□□□□□ -0.66
PRKCB-209ENST00000498058 TSPAN13O95857 204 aa10.93□□□□□ -0.66
PRKCB-209ENST00000498058 CEND1Q8N111 149 aa10.93□□□□□ -0.66
PRKCB-209ENST00000498058 Q8NDZ9 215 aa10.93□□□□□ -0.66
PRKCB-209ENST00000498058 CBY1Q9Y3M2 126 aa10.93□□□□□ -0.66
PRKCB-209ENST00000498058 S100A7L2Q5SY68 101 aa10.92□□□□□ -0.66
PRKCB-209ENST00000498058 A4D1N5 150 aa10.91□□□□□ -0.66
PRKCB-209ENST00000498058 GAGE10A6NGK3 116 aa10.91□□□□□ -0.66
PRKCB-209ENST00000498058 RPL37AP8A6NKH3 93 aa10.91□□□□□ -0.66
PRKCB-209ENST00000498058 BCE1O60756 84 aa10.91□□□□□ -0.66
PRKCB-209ENST00000498058 LINC00167Q96N53 147 aa10.91□□□□□ -0.66
PRKCB-209ENST00000498058 ANAPC11Q9NYG5 84 aa10.9□□□□□ -0.66
PRKCB-209ENST00000498058 TRAV13-2A0A0B4J235 113 aa10.89□□□□□ -0.67
PRKCB-209ENST00000498058 DDTP30046 118 aa10.89□□□□□ -0.67
PRKCB-209ENST00000498058 OR13C6PQ8NH95 151 aa10.89□□□□□ -0.67
PRKCB-209ENST00000498058 M0R143 59 aa10.88□□□□□ -0.67
PRKCB-209ENST00000498058 TMEM126AQ9H061 195 aa10.88□□□□□ -0.67
PRKCB-209ENST00000498058 IGKV2-28A0A075B6P5 120 aa10.87□□□□□ -0.67
PRKCB-209ENST00000498058 IGKV2D-28P01615 120 aa10.87□□□□□ -0.67
PRKCB-209ENST00000498058 RPL28P46779 137 aaKnown RBP10.87□□□□□ -0.67
PRKCB-209ENST00000498058 CTAG1AP78358 180 aa10.87□□□□□ -0.67
PRKCB-209ENST00000498058 TRBV10-3A0A0K0K1G6 114 aa10.86□□□□□ -0.67
PRKCB-209ENST00000498058 A6NDN8 102 aa10.86□□□□□ -0.67
PRKCB-209ENST00000498058 IGLV6-57P01721 117 aa10.86□□□□□ -0.67
PRKCB-209ENST00000498058 KRTAP13-2Q52LG2 175 aa10.86□□□□□ -0.67
PRKCB-209ENST00000498058 KRTAP13-1Q8IUC0 172 aa10.86□□□□□ -0.67
PRKCB-209ENST00000498058 RAB37Q96AX2 223 aa10.86□□□□□ -0.67
PRKCB-209ENST00000498058 LINC00337Q8N6G1 96 aa10.85□□□□□ -0.67
PRKCB-209ENST00000498058 PRYO14603 147 aa10.84□□□□□ -0.67
PRKCB-209ENST00000498058 FXYD2P54710 66 aa10.84□□□□□ -0.67
PRKCB-209ENST00000498058 TYMSOSQ8TAI1 123 aa10.84□□□□□ -0.67
PRKCB-209ENST00000498058 A0A0B4J2C4 111 aa10.83□□□□□ -0.68
PRKCB-209ENST00000498058 CRYGAP11844 174 aa10.83□□□□□ -0.68
PRKCB-209ENST00000498058 KCNQ1DNQ9H478 68 aa10.83□□□□□ -0.68
PRKCB-209ENST00000498058 TRAV23DV6A0A075B6W5 121 aa10.81□□□□□ -0.68
PRKCB-209ENST00000498058 CFC1BP0CG36 223 aa10.81□□□□□ -0.68
PRKCB-209ENST00000498058 CFC1P0CG37 223 aa10.81□□□□□ -0.68
PRKCB-209ENST00000498058 HINT1P49773 126 aaPredicted RBP10.81□□□□□ -0.68
PRKCB-209ENST00000498058 BVES-AS1Q5T3Y7 98 aa10.81□□□□□ -0.68
PRKCB-209ENST00000498058 NHP2Q9NX24 153 aaKnown RBP10.81□□□□□ -0.68
PRKCB-209ENST00000498058 RETNLBQ9BQ08 111 aa10.78□□□□□ -0.68
PRKCB-209ENST00000498058 PRO1854Q9UHT4 67 aa10.78□□□□□ -0.68
PRKCB-209ENST00000498058 ZNF73O43830 326 aaPredicted RBP10.77□□□□□ -0.69
PRKCB-209ENST00000498058 UBE2AP49459 152 aa10.77□□□□□ -0.69
PRKCB-209ENST00000498058 ETDCA0A1B0GVM5 59 aa10.76□□□□□ -0.69
PRKCB-209ENST00000498058 A0A1B0GWB2 263 aa10.76□□□□□ -0.69
PRKCB-209ENST00000498058 FAT4Q6V0I7 4981 aa10.76□□□□□ -0.69
PRKCB-209ENST00000498058 PRLHP81277 87 aa10.75□□□□□ -0.69
PRKCB-209ENST00000498058 Q1RN00 199 aa10.75□□□□□ -0.69
PRKCB-209ENST00000498058 MUC17Q685J3 4493 aa10.74□□□□□ -0.69
PRKCB-209ENST00000498058 SPRR1AP35321 89 aa10.74□□□□□ -0.69
PRKCB-209ENST00000498058 PCP4L1A6NKN8 68 aa10.73□□□□□ -0.69
PRKCB-209ENST00000498058 H7C2G1 150 aa10.73□□□□□ -0.69
PRKCB-209ENST00000498058 BATFQ16520 125 aa10.73□□□□□ -0.69
PRKCB-209ENST00000498058 FAM229BQ4G0N7 80 aa10.73□□□□□ -0.69
PRKCB-209ENST00000498058 FAM19A1Q7Z5A9 133 aa10.73□□□□□ -0.69
PRKCB-209ENST00000498058 TRBV7-6A0A0J9YX20 115 aa10.72□□□□□ -0.69
PRKCB-209ENST00000498058 VAMP3Q15836 100 aa10.72□□□□□ -0.69
PRKCB-209ENST00000498058 LCE2AQ5TA79 106 aaPredicted RBP10.72□□□□□ -0.69
PRKCB-209ENST00000498058 LINC00304Q8N9R0 145 aa10.72□□□□□ -0.69
PRKCB-209ENST00000498058 SMIM11BQ8TCY0 68 aa10.72□□□□□ -0.69
PRKCB-209ENST00000498058 K7ERJ3 54 aa10.71□□□□□ -0.69
PRKCB-209ENST00000498058 C6orf99Q4VX62 202 aa10.71□□□□□ -0.69
PRKCB-209ENST00000498058 KRTAP4-16G5E9R7 235 aaPredicted RBP10.69□□□□□ -0.7
PRKCB-209ENST00000498058 COX7BP24311 80 aa10.69□□□□□ -0.7
PRKCB-209ENST00000498058 B5MCH6 92 aa10.68□□□□□ -0.7
PRKCB-209ENST00000498058 Q6ZRX8 168 aa10.68□□□□□ -0.7
PRKCB-209ENST00000498058 C3orf22Q8N5N4 141 aa10.68□□□□□ -0.7
PRKCB-209ENST00000498058 KRTAP9-2Q9BYQ4 174 aa10.68□□□□□ -0.7
PRKCB-209ENST00000498058 A0A0U1RQV1 116 aa10.67□□□□□ -0.7
PRKCB-209ENST00000498058 ELOF1P60002 83 aaKnown RBP10.66□□□□□ -0.7
PRKCB-209ENST00000498058 COX6CP09669 75 aa10.65□□□□□ -0.7
PRKCB-209ENST00000498058 PSMB2P49721 201 aa10.65□□□□□ -0.7
PRKCB-209ENST00000498058 DHRS4-AS1Q9P1J3 65 aa10.65□□□□□ -0.7
PRKCB-209ENST00000498058 IGLV7-46A0A075B6I9 117 aa10.63□□□□□ -0.71
PRKCB-209ENST00000498058 H0YGX0 51 aa10.63□□□□□ -0.71
PRKCB-209ENST00000498058 SNCGO76070 127 aa10.63□□□□□ -0.71
PRKCB-209ENST00000498058 TPRXLQ17RH7 258 aa10.63□□□□□ -0.71
PRKCB-209ENST00000498058 HIGD2AQ9BW72 106 aa10.63□□□□□ -0.71
PRKCB-209ENST00000498058 SLC25A20O43772 301 aa10.62□□□□□ -0.71
PRKCB-209ENST00000498058 SNHG12Q9BXW3 62 aa10.62□□□□□ -0.71
PRKCB-209ENST00000498058 TRIAP1O43715 76 aa10.6□□□□□ -0.71
PRKCB-209ENST00000498058 COL5A1-AS1Q5SY13 56 aa10.6□□□□□ -0.71
PRKCB-209ENST00000498058 CDIP1Q9H305 208 aa10.6□□□□□ -0.71
PRKCB-209ENST00000498058 ZNF706Q9Y5V0 76 aaPredicted RBP10.59□□□□□ -0.71
PRKCB-209ENST00000498058 SCGB1C2P0DMR2 95 aa10.58□□□□□ -0.72
PRKCB-209ENST00000498058 LYRM7Q5U5X0 104 aa10.58□□□□□ -0.72
PRKCB-209ENST00000498058 SMCR5Q8TEV8 140 aa10.58□□□□□ -0.72
PRKCB-209ENST00000498058 SPRR4Q96PI1 79 aa10.58□□□□□ -0.72
PRKCB-209ENST00000498058 Q9BRP9 147 aa10.58□□□□□ -0.72
PRKCB-209ENST00000498058 LINC00575Q6W349 94 aa10.57□□□□□ -0.72
PRKCB-209ENST00000498058 hADV29S1A0JD25 119 aa10.55□□□□□ -0.72
PRKCB-209ENST00000498058 A0A1B0GX51 115 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms