RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 KRTAP10-4P60372 401 aaPredicted RBP12.15□□□□□ -0.46
SCAMP3-209ENST00000497470 RPL28P46779 137 aaKnown RBP12.14□□□□□ -0.47
SCAMP3-209ENST00000497470 HINT1P49773 126 aaPredicted RBP12.14□□□□□ -0.47
SCAMP3-209ENST00000497470 IGLV7-43P04211 117 aa12.13□□□□□ -0.47
SCAMP3-209ENST00000497470 C1orf137Q5JT78 98 aa12.13□□□□□ -0.47
SCAMP3-209ENST00000497470 NHP2Q9NX24 153 aaKnown RBP12.13□□□□□ -0.47
SCAMP3-209ENST00000497470 RPL13AP40429 203 aaKnown RBP12.12□□□□□ -0.47
SCAMP3-209ENST00000497470 KRTAP13-1Q8IUC0 172 aa12.12□□□□□ -0.47
SCAMP3-209ENST00000497470 DIRC1Q969H9 104 aa12.12□□□□□ -0.47
SCAMP3-209ENST00000497470 Q5VSD8 79 aa12.11□□□□□ -0.47
SCAMP3-209ENST00000497470 ETDCA0A1B0GVM5 59 aa12.1□□□□□ -0.47
SCAMP3-209ENST00000497470 ZNF861PO60384 105 aa12.1□□□□□ -0.47
SCAMP3-209ENST00000497470 SMIM11BQ8TCY0 68 aa12.1□□□□□ -0.47
SCAMP3-209ENST00000497470 BIRC6Q9NR09 4857 aa12.09□□□□□ -0.47
SCAMP3-209ENST00000497470 B5MCH6 92 aa12.08□□□□□ -0.48
SCAMP3-209ENST00000497470 INAFM2P0DMQ5 153 aa12.08□□□□□ -0.48
SCAMP3-209ENST00000497470 VAMP3Q15836 100 aa12.08□□□□□ -0.48
SCAMP3-209ENST00000497470 C6orf99Q4VX62 202 aa12.08□□□□□ -0.48
SCAMP3-209ENST00000497470 Q6ZRX8 168 aa12.08□□□□□ -0.48
SCAMP3-209ENST00000497470 ELOF1P60002 83 aaKnown RBP12.07□□□□□ -0.48
SCAMP3-209ENST00000497470 SPINK6Q6UWN8 80 aa12.07□□□□□ -0.48
SCAMP3-209ENST00000497470 UBE2AP49459 152 aa12.06□□□□□ -0.48
SCAMP3-209ENST00000497470 FAM19A1Q7Z5A9 133 aa12.06□□□□□ -0.48
SCAMP3-209ENST00000497470 RYR1P21817 5038 aa12.05□□□□□ -0.48
SCAMP3-209ENST00000497470 H0YGX0 51 aa12.04□□□□□ -0.48
SCAMP3-209ENST00000497470 COX7BP24311 80 aa12.04□□□□□ -0.48
SCAMP3-209ENST00000497470 DHRS4-AS1Q9P1J3 65 aa12.04□□□□□ -0.48
SCAMP3-209ENST00000497470 HSPG2P98160 4391 aa12.04□□□□□ -0.48
SCAMP3-209ENST00000497470 KIAA1109Q2LD37 5005 aa12.03□□□□□ -0.48
SCAMP3-209ENST00000497470 KRTAP17-1Q9BYP8 105 aa12.01□□□□□ -0.49
SCAMP3-209ENST00000497470 COX6CP09669 75 aa12□□□□□ -0.49
SCAMP3-209ENST00000497470 Q1RN00 199 aa12□□□□□ -0.49
SCAMP3-209ENST00000497470 A0A1B0GX51 115 aa11.99□□□□□ -0.49
SCAMP3-209ENST00000497470 K7ERJ3 54 aa11.99□□□□□ -0.49
SCAMP3-209ENST00000497470 TSPAN13O95857 204 aa11.99□□□□□ -0.49
SCAMP3-209ENST00000497470 PRLHP81277 87 aa11.99□□□□□ -0.49
SCAMP3-209ENST00000497470 SNHG12Q9BXW3 62 aa11.98□□□□□ -0.49
SCAMP3-209ENST00000497470 H7C2G1 150 aa11.97□□□□□ -0.49
SCAMP3-209ENST00000497470 SMCR5Q8TEV8 140 aa11.97□□□□□ -0.49
SCAMP3-209ENST00000497470 Q9BRP9 147 aa11.97□□□□□ -0.49
SCAMP3-209ENST00000497470 SNCGO76070 127 aa11.96□□□□□ -0.49
SCAMP3-209ENST00000497470 LINC00575Q6W349 94 aa11.96□□□□□ -0.49
SCAMP3-209ENST00000497470 SLC25A20O43772 301 aa11.95□□□□□ -0.5
SCAMP3-209ENST00000497470 ZNF706Q9Y5V0 76 aaPredicted RBP11.95□□□□□ -0.5
SCAMP3-209ENST00000497470 VPS13BQ7Z7G8 4022 aa11.94□□□□□ -0.5
SCAMP3-209ENST00000497470 PCP4L1A6NKN8 68 aa11.94□□□□□ -0.5
SCAMP3-209ENST00000497470 TRIAP1O43715 76 aa11.94□□□□□ -0.5
SCAMP3-209ENST00000497470 BATFQ16520 125 aa11.94□□□□□ -0.5
SCAMP3-209ENST00000497470 COL5A1-AS1Q5SY13 56 aa11.93□□□□□ -0.5
SCAMP3-209ENST00000497470 HIGD2AQ9BW72 106 aa11.93□□□□□ -0.5
SCAMP3-209ENST00000497470 PSMB2P49721 201 aa11.92□□□□□ -0.5
SCAMP3-209ENST00000497470 LYRM7Q5U5X0 104 aa11.92□□□□□ -0.5
SCAMP3-209ENST00000497470 FAT1Q14517 4588 aa11.9□□□□□ -0.5
SCAMP3-209ENST00000497470 hADV29S1A0JD25 119 aa11.9□□□□□ -0.5
SCAMP3-209ENST00000497470 C9orf118A6NHY6 69 aa11.89□□□□□ -0.51
SCAMP3-209ENST00000497470 TAX1BP3O14907 124 aa11.88□□□□□ -0.51
SCAMP3-209ENST00000497470 GHRHP01286 108 aa11.88□□□□□ -0.51
SCAMP3-209ENST00000497470 OCIAD2Q56VL3 154 aa11.88□□□□□ -0.51
SCAMP3-209ENST00000497470 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.88□□□□□ -0.51
SCAMP3-209ENST00000497470 SPRR1BP22528 89 aa11.87□□□□□ -0.51
SCAMP3-209ENST00000497470 FAM229BQ4G0N7 80 aa11.87□□□□□ -0.51
SCAMP3-209ENST00000497470 PPDPFLQ8WWR9 84 aa11.87□□□□□ -0.51
SCAMP3-209ENST00000497470 SPRR4Q96PI1 79 aa11.87□□□□□ -0.51
SCAMP3-209ENST00000497470 SRRM2Q9UQ35 2752 aaKnown RBP11.87□□□□□ -0.51
SCAMP3-209ENST00000497470 ERC2-IT1O76042 136 aa11.86□□□□□ -0.51
SCAMP3-209ENST00000497470 LINC00483Q53H64 154 aa11.86□□□□□ -0.51
SCAMP3-209ENST00000497470 KRTAP4-5Q9BYR2 181 aa11.86□□□□□ -0.51
SCAMP3-209ENST00000497470 IGLV5-48A0A075B6I7 105 aa11.85□□□□□ -0.51
SCAMP3-209ENST00000497470 H3BQ85 93 aa11.85□□□□□ -0.51
SCAMP3-209ENST00000497470 SCGB1C2P0DMR2 95 aa11.85□□□□□ -0.51
SCAMP3-209ENST00000497470 TRBV20-1A0A075B6N2 111 aa11.84□□□□□ -0.51
SCAMP3-209ENST00000497470 TRACP01848 142 aa11.84□□□□□ -0.51
SCAMP3-209ENST00000497470 KRTAP1-4P0C5Y4 121 aa11.84□□□□□ -0.51
SCAMP3-209ENST00000497470 HERC2O95714 4834 aa11.84□□□□□ -0.51
SCAMP3-209ENST00000497470 LST1O00453 97 aa11.82□□□□□ -0.52
SCAMP3-209ENST00000497470 OXTP01178 125 aa11.82□□□□□ -0.52
SCAMP3-209ENST00000497470 FAM218AQ96MZ4 157 aa11.82□□□□□ -0.52
SCAMP3-209ENST00000497470 TEX49A0A1B0GTD5 131 aa11.81□□□□□ -0.52
SCAMP3-209ENST00000497470 H3BUT2 72 aa11.8□□□□□ -0.52
SCAMP3-209ENST00000497470 LINC01600Q96MT4 127 aa11.8□□□□□ -0.52
SCAMP3-209ENST00000497470 A0A1W2PPM0 123 aa11.79□□□□□ -0.52
SCAMP3-209ENST00000497470 Q6ZQY7 126 aa11.79□□□□□ -0.52
SCAMP3-209ENST00000497470 LINC01547P58512 204 aaPredicted RBP11.78□□□□□ -0.52
SCAMP3-209ENST00000497470 CLEC2BQ92478 149 aa11.78□□□□□ -0.52
SCAMP3-209ENST00000497470 DNAL4O96015 105 aa11.77□□□□□ -0.53
SCAMP3-209ENST00000497470 FABP2P12104 132 aa11.77□□□□□ -0.53
SCAMP3-209ENST00000497470 ATXN8Q156A1 80 aa11.77□□□□□ -0.53
SCAMP3-209ENST00000497470 CRYGAP11844 174 aa11.76□□□□□ -0.53
SCAMP3-209ENST00000497470 KRTAP29-1A8MX34 341 aaPredicted RBP11.75□□□□□ -0.53
SCAMP3-209ENST00000497470 GAGE2AQ6NT46 116 aa11.75□□□□□ -0.53
SCAMP3-209ENST00000497470 ST20-AS1Q8NBB2 130 aa11.75□□□□□ -0.53
SCAMP3-209ENST00000497470 Q8N377 158 aa11.74□□□□□ -0.53
SCAMP3-209ENST00000497470 TCL1BO95988 128 aa11.73□□□□□ -0.53
SCAMP3-209ENST00000497470 NAA38Q9BRA0 125 aaKnown RBP11.73□□□□□ -0.53
SCAMP3-209ENST00000497470 LAMTOR3Q9UHA4 124 aa11.72□□□□□ -0.53
SCAMP3-209ENST00000497470 TMEM256-PLSCR3K7ERE1 68 aa11.71□□□□□ -0.53
SCAMP3-209ENST00000497470 ORMDL1Q9P0S3 153 aa11.71□□□□□ -0.53
SCAMP3-209ENST00000497470 KRTAP10-8P60410 259 aa11.69□□□□□ -0.54
SCAMP3-209ENST00000497470 SSBP3-AS1Q7Z2R9 100 aa11.69□□□□□ -0.54
SCAMP3-209ENST00000497470 SMIM29Q86T20 159 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms