RNA–Protein interactions for RNA: ENST00000495640.1

COPS3-211, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 333 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-211ENST00000495640 ACYP1P07311 99 aa-0.02□□□□□ -2.41
COPS3-211ENST00000495640 TIAM2Q8IVF5 1701 aa-0.02□□□□□ -2.41
COPS3-211ENST00000495640 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.02□□□□□ -2.41
COPS3-211ENST00000495640 TRAV21A0A0B4J279 112 aa-0.03□□□□□ -2.41
COPS3-211ENST00000495640 CEBPZOSA8MTT3 80 aa-0.03□□□□□ -2.41
COPS3-211ENST00000495640 CCL22O00626 93 aa-0.03□□□□□ -2.41
COPS3-211ENST00000495640 SPRR2GQ9BYE4 73 aa-0.03□□□□□ -2.41
COPS3-211ENST00000495640 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.03□□□□□ -2.41
COPS3-211ENST00000495640 GAFA1Q96PS6 74 aa-0.04□□□□□ -2.42
COPS3-211ENST00000495640 RGPD8O14715 1765 aaPredicted RBP-0.04□□□□□ -2.42
COPS3-211ENST00000495640 RGPD5Q99666 1765 aa-0.04□□□□□ -2.42
COPS3-211ENST00000495640 ZANQ9Y493 2812 aa-0.05□□□□□ -2.42
COPS3-211ENST00000495640 FLNBO75369 2602 aaKnown RBP-0.05□□□□□ -2.42
COPS3-211ENST00000495640 ERVK-7P63135 1459 aa-0.05□□□□□ -2.42
COPS3-211ENST00000495640 CCDC18Q5T9S5 1454 aa-0.05□□□□□ -2.42
COPS3-211ENST00000495640 ACANP16112 2415 aa-0.06□□□□□ -2.42
COPS3-211ENST00000495640 MAP1AP78559 2803 aaPredicted RBP-0.06□□□□□ -2.42
COPS3-211ENST00000495640 KANTRA0A1W2PQU2 76 aa-0.06□□□□□ -2.42
COPS3-211ENST00000495640 ST20Q9HBF5 79 aa-0.06□□□□□ -2.42
COPS3-211ENST00000495640 NCOA2Q15596 1464 aa-0.06□□□□□ -2.42
COPS3-211ENST00000495640 ARHGAP35Q9NRY4 1499 aa-0.06□□□□□ -2.42
COPS3-211ENST00000495640 URB2Q14146 1524 aaKnown RBP-0.07□□□□□ -2.42
COPS3-211ENST00000495640 LOC730098B7Z3J9 87 aa-0.07□□□□□ -2.42
COPS3-211ENST00000495640 PIK3C2BO00750 1634 aa-0.07□□□□□ -2.42
COPS3-211ENST00000495640 SCN11AQ9UI33 1791 aa-0.07□□□□□ -2.42
COPS3-211ENST00000495640 ARFGEF2Q9Y6D5 1785 aa-0.07□□□□□ -2.42
COPS3-211ENST00000495640 DCAF1Q9Y4B6 1507 aa-0.08□□□□□ -2.42
COPS3-211ENST00000495640 M0R2T5 61 aa-0.08□□□□□ -2.42
COPS3-211ENST00000495640 HEPN1Q6WQI6 88 aa-0.08□□□□□ -2.42
COPS3-211ENST00000495640 CDKN2A-AS1Q9UH64 79 aa-0.08□□□□□ -2.42
COPS3-211ENST00000495640 MAGI3Q5TCQ9 1506 aa-0.08□□□□□ -2.42
COPS3-211ENST00000495640 LRP1BQ9NZR2 4599 aa-0.09□□□□□ -2.42
COPS3-211ENST00000495640 STAB1Q9NY15 2570 aa-0.09□□□□□ -2.42
COPS3-211ENST00000495640 DEFB121Q5J5C9 76 aa-0.09□□□□□ -2.42
COPS3-211ENST00000495640 WFDC9Q8NEX5 89 aa-0.09□□□□□ -2.42
COPS3-211ENST00000495640 S100A13Q99584 98 aa-0.09□□□□□ -2.42
COPS3-211ENST00000495640 LYSTQ99698 3801 aa-0.09□□□□□ -2.42
COPS3-211ENST00000495640 AKAP13Q12802 2813 aa-0.09□□□□□ -2.42
COPS3-211ENST00000495640 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.09□□□□□ -2.42
COPS3-211ENST00000495640 PDE4DIPQ5VU43 2346 aa-0.09□□□□□ -2.42
COPS3-211ENST00000495640 SPRR2BP35325 72 aa-0.1□□□□□ -2.43
COPS3-211ENST00000495640 ADIRFQ15847 76 aa-0.1□□□□□ -2.43
COPS3-211ENST00000495640 COX6B2Q6YFQ2 88 aa-0.1□□□□□ -2.43
COPS3-211ENST00000495640 WFDC13Q8IUB5 93 aa-0.1□□□□□ -2.43
COPS3-211ENST00000495640 GPR98Q8WXG9 6306 aa-0.1□□□□□ -2.43
COPS3-211ENST00000495640 C4AP0C0L4 1744 aa-0.1□□□□□ -2.43
COPS3-211ENST00000495640 C4BP0C0L5 1744 aa-0.1□□□□□ -2.43
COPS3-211ENST00000495640 NWD1Q149M9 1564 aa-0.11□□□□□ -2.43
COPS3-211ENST00000495640 PCNX1Q96RV3 2341 aa-0.11□□□□□ -2.43
COPS3-211ENST00000495640 NESP48681 1621 aa-0.11□□□□□ -2.43
COPS3-211ENST00000495640 SCRIBQ14160 1630 aa-0.11□□□□□ -2.43
COPS3-211ENST00000495640 NDUFB1O75438 58 aa-0.11□□□□□ -2.43
COPS3-211ENST00000495640 RPL38P63173 70 aaKnown RBP-0.11□□□□□ -2.43
COPS3-211ENST00000495640 PRRC2CQ9Y520 2896 aaKnown RBP-0.11□□□□□ -2.43
COPS3-211ENST00000495640 SSPOA2VEC9 5147 aa-0.11□□□□□ -2.43
COPS3-211ENST00000495640 KDM5DQ9BY66 1539 aa-0.12□□□□□ -2.43
COPS3-211ENST00000495640 NBASA2RRP1 2371 aa-0.12□□□□□ -2.43
COPS3-211ENST00000495640 NDUFA3O95167 84 aa-0.12□□□□□ -2.43
COPS3-211ENST00000495640 IFI6P09912 130 aa-0.12□□□□□ -2.43
COPS3-211ENST00000495640 BVES-AS1Q5T3Y7 98 aa-0.12□□□□□ -2.43
COPS3-211ENST00000495640 SVEP1Q4LDE5 3571 aa-0.12□□□□□ -2.43
COPS3-211ENST00000495640 CFAP74Q9C0B2 1584 aa-0.13□□□□□ -2.43
COPS3-211ENST00000495640 H3BUT2 72 aa-0.13□□□□□ -2.43
COPS3-211ENST00000495640 TNRC18O15417 2968 aaPredicted RBP-0.13□□□□□ -2.43
COPS3-211ENST00000495640 DSPP15924 2871 aaKnown RBP-0.13□□□□□ -2.43
COPS3-211ENST00000495640 SYNE2Q8WXH0 6885 aaKnown RBP-0.14□□□□□ -2.43
COPS3-211ENST00000495640 LCE6AA0A183 80 aa-0.14□□□□□ -2.43
COPS3-211ENST00000495640 CICQ96RK0 1608 aaPredicted RBP-0.15□□□□□ -2.43
COPS3-211ENST00000495640 ABCC1P33527 1531 aa-0.15□□□□□ -2.43
COPS3-211ENST00000495640 PTPN23Q9H3S7 1636 aa-0.16□□□□□ -2.43
COPS3-211ENST00000495640 FSIP2Q5CZC0 6907 aa-0.16□□□□□ -2.43
COPS3-211ENST00000495640 PKHD1P08F94 4074 aa-0.16□□□□□ -2.43
COPS3-211ENST00000495640 UMAD1C9J7I0 102 aa-0.16□□□□□ -2.44
COPS3-211ENST00000495640 DEFB135Q30KP9 77 aa-0.16□□□□□ -2.44
COPS3-211ENST00000495640 ATP5EP2Q5VTU8 51 aa-0.16□□□□□ -2.44
COPS3-211ENST00000495640 ADAMTS12P58397 1594 aa-0.16□□□□□ -2.44
COPS3-211ENST00000495640 CCDC88BA6NC98 1476 aa-0.16□□□□□ -2.44
COPS3-211ENST00000495640 HECTD1Q9ULT8 2610 aa-0.17□□□□□ -2.44
COPS3-211ENST00000495640 CFAP43Q8NDM7 1665 aa-0.17□□□□□ -2.44
COPS3-211ENST00000495640 HMGA1P17096 107 aaKnown RBP-0.17□□□□□ -2.44
COPS3-211ENST00000495640 FLGP20930 4061 aaPredicted RBP-0.17□□□□□ -2.44
COPS3-211ENST00000495640 WIZO95785 1651 aa-0.18□□□□□ -2.44
COPS3-211ENST00000495640 PLCH1Q4KWH8 1693 aa-0.18□□□□□ -2.44
COPS3-211ENST00000495640 MUC2Q02817 5179 aa-0.18□□□□□ -2.44
COPS3-211ENST00000495640 RRBP1Q9P2E9 1410 aaKnown RBP-0.18□□□□□ -2.44
COPS3-211ENST00000495640 ZZEF1O43149 2961 aa-0.18□□□□□ -2.44
COPS3-211ENST00000495640 CD163L1Q9NR16 1453 aa-0.18□□□□□ -2.44
COPS3-211ENST00000495640 ABCA8O94911 1581 aa-0.19□□□□□ -2.44
COPS3-211ENST00000495640 STAB2Q8WWQ8 2551 aa-0.19□□□□□ -2.44
COPS3-211ENST00000495640 SMIM13P0DJ93 91 aa-0.19□□□□□ -2.44
COPS3-211ENST00000495640 C18orf32Q8TCD1 76 aa-0.19□□□□□ -2.44
COPS3-211ENST00000495640 PKD1P98161 4303 aa-0.19□□□□□ -2.44
COPS3-211ENST00000495640 MAP3K1Q13233 1512 aa-0.19□□□□□ -2.44
COPS3-211ENST00000495640 TGP01266 2768 aa-0.2□□□□□ -2.44
COPS3-211ENST00000495640 RICTORQ6R327 1708 aa-0.2□□□□□ -2.44
COPS3-211ENST00000495640 IFI27P40305 119 aaPredicted RBP-0.2□□□□□ -2.44
COPS3-211ENST00000495640 NREPQ16612 68 aa-0.2□□□□□ -2.44
COPS3-211ENST00000495640 BPTFQ12830 3046 aa-0.2□□□□□ -2.44
COPS3-211ENST00000495640 NF1P21359 2839 aa-0.2□□□□□ -2.44
COPS3-211ENST00000495640 NBEAL1Q6ZS30 2694 aa-0.2□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms