RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 PIGYQ3MUY2 71 aa0.93□□□□□ -2.26
PTPN12-212ENST00000494248 Q8IZM0 81 aa0.93□□□□□ -2.26
PTPN12-212ENST00000494248 DEFB123Q8N688 67 aa0.93□□□□□ -2.26
PTPN12-212ENST00000494248 TP53AIP1Q9HCN2 124 aa0.93□□□□□ -2.26
PTPN12-212ENST00000494248 TMEM167BQ9NRX6 74 aa0.93□□□□□ -2.26
PTPN12-212ENST00000494248 DUOX1Q9NRD9 1551 aa0.92□□□□□ -2.26
PTPN12-212ENST00000494248 MYO7AQ13402 2215 aa0.92□□□□□ -2.26
PTPN12-212ENST00000494248 LYNX1G3V0Z9 82 aa0.92□□□□□ -2.26
PTPN12-212ENST00000494248 I3L2K1 104 aa0.92□□□□□ -2.26
PTPN12-212ENST00000494248 DEFB119Q8N690 84 aa0.92□□□□□ -2.26
PTPN12-212ENST00000494248 CDKN2A-AS1Q9UH64 79 aa0.92□□□□□ -2.26
PTPN12-212ENST00000494248 TNRC6CQ9HCJ0 1690 aaKnown RBP0.91□□□□□ -2.26
PTPN12-212ENST00000494248 CCL22O00626 93 aa0.91□□□□□ -2.26
PTPN12-212ENST00000494248 KRTAP12-3P60328 96 aa0.91□□□□□ -2.26
PTPN12-212ENST00000494248 MRPL34Q9BQ48 92 aaKnown RBP0.91□□□□□ -2.26
PTPN12-212ENST00000494248 CNFNQ9BYD5 112 aa0.91□□□□□ -2.26
PTPN12-212ENST00000494248 RTTNQ86VV8 2226 aa0.91□□□□□ -2.26
PTPN12-212ENST00000494248 FREM1Q5H8C1 2179 aa0.9□□□□□ -2.26
PTPN12-212ENST00000494248 C4BP0C0L5 1744 aa0.9□□□□□ -2.27
PTPN12-212ENST00000494248 KRTAP12-1P59990 96 aa0.9□□□□□ -2.27
PTPN12-212ENST00000494248 LINC00308Q8TCZ7 52 aa0.9□□□□□ -2.27
PTPN12-212ENST00000494248 LMO7Q8WWI1 1683 aa0.9□□□□□ -2.27
PTPN12-212ENST00000494248 COX6A2Q02221 97 aa0.89□□□□□ -2.27
PTPN12-212ENST00000494248 PRO3102Q9H379 93 aa0.89□□□□□ -2.27
PTPN12-212ENST00000494248 SMIM2Q9BVW6 85 aa0.88□□□□□ -2.27
PTPN12-212ENST00000494248 F5P12259 2224 aa0.88□□□□□ -2.27
PTPN12-212ENST00000494248 MED13LQ71F56 2210 aa0.88□□□□□ -2.27
PTPN12-212ENST00000494248 ICE1Q9Y2F5 2266 aa0.87□□□□□ -2.27
PTPN12-212ENST00000494248 LOC730098B7Z3J9 87 aa0.87□□□□□ -2.27
PTPN12-212ENST00000494248 H0YAA0 97 aa0.87□□□□□ -2.27
PTPN12-212ENST00000494248 KRTAP6-3Q3LI67 103 aa0.87□□□□□ -2.27
PTPN12-212ENST00000494248 MINOS1Q5TGZ0 78 aa0.87□□□□□ -2.27
PTPN12-212ENST00000494248 GCC2Q8IWJ2 1684 aa0.87□□□□□ -2.27
PTPN12-212ENST00000494248 CLTCL1P53675 1640 aa0.86□□□□□ -2.27
PTPN12-212ENST00000494248 NDUFA1O15239 70 aa0.86□□□□□ -2.27
PTPN12-212ENST00000494248 SPINK9Q5DT21 86 aa0.86□□□□□ -2.27
PTPN12-212ENST00000494248 PRO0255Q9UI72 69 aa0.86□□□□□ -2.27
PTPN12-212ENST00000494248 CACNA1CQ13936 2221 aa0.86□□□□□ -2.27
PTPN12-212ENST00000494248 TECTAO75443 2155 aa0.85□□□□□ -2.27
PTPN12-212ENST00000494248 CACNA1BQ00975 2339 aa0.85□□□□□ -2.27
PTPN12-212ENST00000494248 TFF3Q07654 80 aa0.85□□□□□ -2.27
PTPN12-212ENST00000494248 C10orf95Q9H7T3 257 aa0.85□□□□□ -2.27
PTPN12-212ENST00000494248 C6orf48Q9UBA6 75 aa0.85□□□□□ -2.27
PTPN12-212ENST00000494248 TNCP24821 2201 aa0.84□□□□□ -2.27
PTPN12-212ENST00000494248 Q5VSD8 79 aa0.84□□□□□ -2.27
PTPN12-212ENST00000494248 Q6ZSA8 131 aa0.84□□□□□ -2.27
PTPN12-212ENST00000494248 MUC6Q6W4X9 2439 aa0.84□□□□□ -2.28
PTPN12-212ENST00000494248 J3QKU1 62 aa0.83□□□□□ -2.28
PTPN12-212ENST00000494248 SPRR1AP35321 89 aa0.83□□□□□ -2.28
PTPN12-212ENST00000494248 PRB3Q04118 309 aaPredicted RBP0.83□□□□□ -2.28
PTPN12-212ENST00000494248 ABCA1O95477 2261 aa0.83□□□□□ -2.28
PTPN12-212ENST00000494248 BAHCC1Q9P281 2608 aa0.82□□□□□ -2.28
PTPN12-212ENST00000494248 IAPPP10997 89 aa0.82□□□□□ -2.28
PTPN12-212ENST00000494248 H1FX-AS1Q4G0G2 97 aa0.82□□□□□ -2.28
PTPN12-212ENST00000494248 LELP1Q5T871 98 aa0.82□□□□□ -2.28
PTPN12-212ENST00000494248 CACNA1GO43497 2377 aa0.82□□□□□ -2.28
PTPN12-212ENST00000494248 BPTFQ12830 3046 aa0.81□□□□□ -2.28
PTPN12-212ENST00000494248 ANKRD17O75179 2603 aaKnown RBP0.81□□□□□ -2.28
PTPN12-212ENST00000494248 DEFB130BP0DP73 79 aa0.81□□□□□ -2.28
PTPN12-212ENST00000494248 DEFB130AP0DP74 79 aa0.81□□□□□ -2.28
PTPN12-212ENST00000494248 RPS27P42677 84 aaKnown RBP0.81□□□□□ -2.28
PTPN12-212ENST00000494248 RPS27LQ71UM5 84 aaKnown RBP0.81□□□□□ -2.28
PTPN12-212ENST00000494248 WFDC13Q8IUB5 93 aa0.81□□□□□ -2.28
PTPN12-212ENST00000494248 DEFB105AQ8NG35 78 aa0.81□□□□□ -2.28
PTPN12-212ENST00000494248 APLNQ9ULZ1 77 aa0.81□□□□□ -2.28
PTPN12-212ENST00000494248 CADP27708 2225 aa0.81□□□□□ -2.28
PTPN12-212ENST00000494248 A0A0D9SG42 100 aa0.8□□□□□ -2.28
PTPN12-212ENST00000494248 SPRR1BP22528 89 aa0.8□□□□□ -2.28
PTPN12-212ENST00000494248 ALMS1Q8TCU4 4167 aa0.79□□□□□ -2.28
PTPN12-212ENST00000494248 ASXL3Q9C0F0 2248 aa0.79□□□□□ -2.28
PTPN12-212ENST00000494248 TENM1Q9UKZ4 2725 aa0.79□□□□□ -2.28
PTPN12-212ENST00000494248 IGLV5-48A0A075B6I7 105 aa0.79□□□□□ -2.28
PTPN12-212ENST00000494248 KRTAP21-3Q3LHN1 58 aa0.79□□□□□ -2.28
PTPN12-212ENST00000494248 ASCC3Q8N3C0 2202 aaKnown RBP0.79□□□□□ -2.28
PTPN12-212ENST00000494248 WT1-ASQ06250 92 aa0.78□□□□□ -2.28
PTPN12-212ENST00000494248 WFDC10BQ8IUB3 73 aa0.78□□□□□ -2.28
PTPN12-212ENST00000494248 CNTRLQ7Z7A1 2325 aa0.78□□□□□ -2.28
PTPN12-212ENST00000494248 URB1O60287 2271 aaKnown RBP0.77□□□□□ -2.29
PTPN12-212ENST00000494248 H3BUA1 57 aa0.77□□□□□ -2.29
PTPN12-212ENST00000494248 FLG2Q5D862 2391 aaPredicted RBP0.77□□□□□ -2.29
PTPN12-212ENST00000494248 POLR2KP53803 58 aaKnown RBP0.76□□□□□ -2.29
PTPN12-212ENST00000494248 DEFB131AP59861 70 aa0.76□□□□□ -2.29
PTPN12-212ENST00000494248 ARHGAP5-AS1Q96IT6 56 aa0.76□□□□□ -2.29
PTPN12-212ENST00000494248 KAAG1Q9UBP8 84 aa0.76□□□□□ -2.29
PTPN12-212ENST00000494248 FAM208BQ5VWN6 2430 aa0.75□□□□□ -2.29
PTPN12-212ENST00000494248 CACNA1EQ15878 2313 aa0.75□□□□□ -2.29
PTPN12-212ENST00000494248 KNTC1P50748 2209 aa0.75□□□□□ -2.29
PTPN12-212ENST00000494248 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.74□□□□□ -2.296e-15■■■■■ 55.6
PTPN12-212ENST00000494248 KRTAP10-4P60372 401 aaPredicted RBP0.74□□□□□ -2.29
PTPN12-212ENST00000494248 KLK9Q2XQG4 91 aa0.74□□□□□ -2.29
PTPN12-212ENST00000494248 JMJD1CQ15652 2540 aa0.73□□□□□ -2.29
PTPN12-212ENST00000494248 MUC16Q8WXI7 14507 aa0.73□□□□□ -2.29
PTPN12-212ENST00000494248 MMP24-AS1A0A0U1RRL7 71 aa0.73□□□□□ -2.29
PTPN12-212ENST00000494248 RPL39P62891 51 aaKnown RBP0.73□□□□□ -2.29
PTPN12-212ENST00000494248 DEFB109BQ30KR1 87 aa0.73□□□□□ -2.29
PTPN12-212ENST00000494248 KRTAP5-10Q6L8G5 202 aa0.73□□□□□ -2.29
PTPN12-212ENST00000494248 S4R3F8 94 aa0.73□□□□□ -2.29
PTPN12-212ENST00000494248 GOLGA4Q13439 2230 aaKnown RBP0.72□□□□□ -2.29
PTPN12-212ENST00000494248 PIEZO2Q9H5I5 2752 aa0.72□□□□□ -2.29
PTPN12-212ENST00000494248 RPL39LQ96EH5 51 aaKnown RBP0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms