RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 LOC105371267A0A1B0GV96 52 aa1.77□□□□□ -2.13
SMC2-205ENST00000493955 TMEM189A5PLL7 270 aa1.77□□□□□ -2.13
SMC2-205ENST00000493955 SMR3BP02814 79 aaPredicted RBP1.77□□□□□ -2.13
SMC2-205ENST00000493955 TCRAP04437 139 aa1.77□□□□□ -2.13
SMC2-205ENST00000493955 FXYD4P59646 89 aa1.77□□□□□ -2.13
SMC2-205ENST00000493955 TCTE3Q8IZS6 198 aa1.77□□□□□ -2.13
SMC2-205ENST00000493955 SMIM4Q8WVI0 70 aa1.77□□□□□ -2.13
SMC2-205ENST00000493955 SLC35B3Q9H1N7 401 aa1.77□□□□□ -2.13
SMC2-205ENST00000493955 NDUFA4L2Q9NRX3 87 aa1.77□□□□□ -2.13
SMC2-205ENST00000493955 TMEM14BQ9NUH8 114 aa1.77□□□□□ -2.13
SMC2-205ENST00000493955 VPS13BQ7Z7G8 4022 aa1.77□□□□□ -2.13
SMC2-205ENST00000493955 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.76□□□□□ -2.13
SMC2-205ENST00000493955 CORTO00230 105 aa1.76□□□□□ -2.13
SMC2-205ENST00000493955 IFNA17P01571 189 aa1.76□□□□□ -2.13
SMC2-205ENST00000493955 MT-ND4LP03901 98 aa1.76□□□□□ -2.13
SMC2-205ENST00000493955 TRAPPC2P0DI81 140 aa1.76□□□□□ -2.13
SMC2-205ENST00000493955 TRAPPC2BP0DI82 140 aa1.76□□□□□ -2.13
SMC2-205ENST00000493955 SNCAP37840 140 aa1.76□□□□□ -2.13
SMC2-205ENST00000493955 SMCO1Q147U7 214 aa1.76□□□□□ -2.13
SMC2-205ENST00000493955 SPCS2Q15005 226 aa1.76□□□□□ -2.13
SMC2-205ENST00000493955 PSMG4Q5JS54 123 aa1.76□□□□□ -2.13
SMC2-205ENST00000493955 LSM10Q969L4 123 aaKnown RBP1.76□□□□□ -2.13
SMC2-205ENST00000493955 KRTAP4-1Q9BYQ7 146 aa1.76□□□□□ -2.13
SMC2-205ENST00000493955 TRAV2A0A0B4J234 112 aa1.75□□□□□ -2.13
SMC2-205ENST00000493955 CEBPZOSA8MTT3 80 aa1.75□□□□□ -2.13
SMC2-205ENST00000493955 GNG7O60262 68 aa1.75□□□□□ -2.13
SMC2-205ENST00000493955 CD3DP04234 171 aa1.75□□□□□ -2.13
SMC2-205ENST00000493955 SPART-AS1P0CW21 52 aa1.75□□□□□ -2.13
SMC2-205ENST00000493955 FAT1Q14517 4588 aa1.75□□□□□ -2.13
SMC2-205ENST00000493955 DMBT1Q9UGM3 2413 aaPredicted RBP1.75□□□□□ -2.13
SMC2-205ENST00000493955 IL7P13232 177 aa1.74□□□□□ -2.13
SMC2-205ENST00000493955 HLA-DRB4P13762 266 aa1.74□□□□□ -2.13
SMC2-205ENST00000493955 PRCDQ00LT1 54 aa1.74□□□□□ -2.13
SMC2-205ENST00000493955 LIMD2Q9BT23 127 aa1.74□□□□□ -2.13
SMC2-205ENST00000493955 NAA60Q9H7X0 242 aa1.74□□□□□ -2.13
SMC2-205ENST00000493955 PAIP2BQ9ULR5 123 aaKnown RBP1.74□□□□□ -2.13
SMC2-205ENST00000493955 HLA-DRB4X5D2U9 266 aa1.74□□□□□ -2.13
SMC2-205ENST00000493955 UBR4Q5T4S7 5183 aa1.74□□□□□ -2.13
SMC2-205ENST00000493955 TRAV12-2A0A075B6T6 113 aa1.74□□□□□ -2.13
SMC2-205ENST00000493955 TRAV30A0A087WSZ9 112 aa1.74□□□□□ -2.13
SMC2-205ENST00000493955 A8MTW9 85 aa1.74□□□□□ -2.13
SMC2-205ENST00000493955 M0R2Z0 102 aa1.74□□□□□ -2.13
SMC2-205ENST00000493955 NDUFB6O95139 128 aa1.74□□□□□ -2.13
SMC2-205ENST00000493955 IGLC1P0CG04 106 aa1.74□□□□□ -2.13
SMC2-205ENST00000493955 DEFB130BP0DP73 79 aa1.74□□□□□ -2.13
SMC2-205ENST00000493955 DEFB130AP0DP74 79 aa1.74□□□□□ -2.13
SMC2-205ENST00000493955 SLC25A6P12236 298 aa1.74□□□□□ -2.13
SMC2-205ENST00000493955 CKS2P33552 79 aa1.74□□□□□ -2.13
SMC2-205ENST00000493955 SPINK13Q1W4C9 94 aa1.74□□□□□ -2.13
SMC2-205ENST00000493955 AP1S3Q96PC3 154 aa1.74□□□□□ -2.13
SMC2-205ENST00000493955 GSKIPQ9P0R6 139 aa1.74□□□□□ -2.13
SMC2-205ENST00000493955 V9GYH0 126 aa1.74□□□□□ -2.13
SMC2-205ENST00000493955 CRYM-AS1A6NIL9 109 aa1.73□□□□□ -2.13
SMC2-205ENST00000493955 SNRPGP15A8MWD9 76 aa1.73□□□□□ -2.13
SMC2-205ENST00000493955 ARPC5O15511 151 aa1.73□□□□□ -2.13
SMC2-205ENST00000493955 SFT2D2O95562 160 aa1.73□□□□□ -2.13
SMC2-205ENST00000493955 CFDP00746 253 aaPredicted RBP1.73□□□□□ -2.13
SMC2-205ENST00000493955 S100A10P60903 97 aa1.73□□□□□ -2.13
SMC2-205ENST00000493955 ASB16-AS1Q495Z4 193 aa1.73□□□□□ -2.13
SMC2-205ENST00000493955 OCIAD2Q56VL3 154 aa1.73□□□□□ -2.13
SMC2-205ENST00000493955 FAT3Q8TDW7 4589 aa1.72□□□□□ -2.13
SMC2-205ENST00000493955 A0A087WTM6 91 aa1.72□□□□□ -2.13
SMC2-205ENST00000493955 A0A096LPF7 62 aa1.72□□□□□ -2.13
SMC2-205ENST00000493955 IL5P05113 134 aa1.72□□□□□ -2.13
SMC2-205ENST00000493955 PDE6GP18545 87 aa1.72□□□□□ -2.13
SMC2-205ENST00000493955 CCL18P55774 89 aa1.72□□□□□ -2.13
SMC2-205ENST00000493955 WFDC2Q14508 124 aa1.72□□□□□ -2.13
SMC2-205ENST00000493955 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.72□□□□□ -2.13
SMC2-205ENST00000493955 SMIM7Q9BQ49 75 aa1.72□□□□□ -2.13
SMC2-205ENST00000493955 PKHD1L1Q86WI1 4243 aa1.72□□□□□ -2.13
SMC2-205ENST00000493955 LRP1Q07954 4544 aaKnown RBP1.71□□□□□ -2.13
SMC2-205ENST00000493955 HMCN2Q8NDA2 5059 aa1.71□□□□□ -2.14
SMC2-205ENST00000493955 SSSCA1O60232 199 aa1.71□□□□□ -2.14
SMC2-205ENST00000493955 HTN1P15515 57 aa1.71□□□□□ -2.14
SMC2-205ENST00000493955 SNRPD3P62318 126 aaKnown RBP1.71□□□□□ -2.14
SMC2-205ENST00000493955 NMSQ5H8A3 153 aa1.71□□□□□ -2.14
SMC2-205ENST00000493955 WFDC10BQ8IUB3 73 aa1.71□□□□□ -2.14
SMC2-205ENST00000493955 PFDN5Q99471 154 aa1.71□□□□□ -2.14
SMC2-205ENST00000493955 NMES1Q9C002 83 aa1.71□□□□□ -2.14
SMC2-205ENST00000493955 NOP10Q9NPE3 64 aaKnown RBP1.71□□□□□ -2.14
SMC2-205ENST00000493955 PSENENQ9NZ42 101 aa1.71□□□□□ -2.14
SMC2-205ENST00000493955 IGHV3-30P01768 117 aa1.7□□□□□ -2.14
SMC2-205ENST00000493955 MT1HL1P0DM35 61 aa1.7□□□□□ -2.14
SMC2-205ENST00000493955 IGHV3-30-5P0DP03 117 aa1.7□□□□□ -2.14
SMC2-205ENST00000493955 HIST1H1AQ02539 215 aaPredicted RBP1.7□□□□□ -2.14
SMC2-205ENST00000493955 NPVFQ9HCQ7 196 aa1.7□□□□□ -2.14
SMC2-205ENST00000493955 DNAH8Q96JB1 4490 aa1.69□□□□□ -2.14
SMC2-205ENST00000493955 FXYD6-FXYD2A0A087WZ82 144 aa1.69□□□□□ -2.14
SMC2-205ENST00000493955 IGHV1-24A0A0C4DH33 117 aa1.69□□□□□ -2.14
SMC2-205ENST00000493955 KANTRA0A1W2PQU2 76 aa1.69□□□□□ -2.14
SMC2-205ENST00000493955 ZNF727A8MUV8 499 aa1.69□□□□□ -2.14
SMC2-205ENST00000493955 IAPPP10997 89 aa1.69□□□□□ -2.14
SMC2-205ENST00000493955 RRAS2P62070 204 aaPredicted RBP1.69□□□□□ -2.14
SMC2-205ENST00000493955 TMEM263Q8WUH6 116 aaKnown RBP1.69□□□□□ -2.14
SMC2-205ENST00000493955 PPP1R1CQ8WVI7 109 aa1.69□□□□□ -2.14
SMC2-205ENST00000493955 TRGV9Q99603 122 aa1.69□□□□□ -2.14
SMC2-205ENST00000493955 RPRMQ9NS64 109 aa1.69□□□□□ -2.14
SMC2-205ENST00000493955 TIMM8BQ9Y5J9 83 aaPredicted RBP1.69□□□□□ -2.14
SMC2-205ENST00000493955 SRRM2Q9UQ35 2752 aaKnown RBP1.69□□□□□ -2.14
SMC2-205ENST00000493955 UMAD1C9J7I0 102 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms