RNA–Protein interactions for RNA: ENST00000493743.1

SEMA3F-209, Transcript of semaphorin 3F, humanhuman

TSL 3

Gene SEMA3F, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-209ENST00000493743 M0R378 163 aa5.07□□□□□ -1.6
SEMA3F-209ENST00000493743 CXCL6P80162 114 aa5.07□□□□□ -1.6
SEMA3F-209ENST00000493743 HMCN2Q8NDA2 5059 aa5.07□□□□□ -1.6
SEMA3F-209ENST00000493743 LRP1Q07954 4544 aaKnown RBP5.06□□□□□ -1.6
SEMA3F-209ENST00000493743 PKHD1L1Q86WI1 4243 aa5.06□□□□□ -1.6
SEMA3F-209ENST00000493743 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.06□□□□□ -1.6
SEMA3F-209ENST00000493743 IGKV2-29A2NJV5 120 aaPredicted RBP5.06□□□□□ -1.6
SEMA3F-209ENST00000493743 SLC25A20O43772 301 aa5.06□□□□□ -1.6
SEMA3F-209ENST00000493743 TIMM17BO60830 172 aa5.06□□□□□ -1.6
SEMA3F-209ENST00000493743 RPL37AP61513 92 aaKnown RBP5.06□□□□□ -1.6
SEMA3F-209ENST00000493743 UBE2BP63146 152 aa5.06□□□□□ -1.6
SEMA3F-209ENST00000493743 ENHOQ6UWT2 76 aa5.06□□□□□ -1.6
SEMA3F-209ENST00000493743 PLA2G2DQ9UNK4 145 aa5.06□□□□□ -1.6
SEMA3F-209ENST00000493743 FAT3Q8TDW7 4589 aa5.06□□□□□ -1.6
SEMA3F-209ENST00000493743 IGLV4-69A0A075B6H9 119 aa5.05□□□□□ -1.6
SEMA3F-209ENST00000493743 IGLV5-45A0A087WSX0 123 aa5.05□□□□□ -1.6
SEMA3F-209ENST00000493743 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.05□□□□□ -1.6
SEMA3F-209ENST00000493743 H0Y9J4 135 aa5.05□□□□□ -1.6
SEMA3F-209ENST00000493743 ZNF73O43830 326 aaPredicted RBP5.05□□□□□ -1.6
SEMA3F-209ENST00000493743 ANGP03950 147 aaKnown RBP5.05□□□□□ -1.6
SEMA3F-209ENST00000493743 UBE2D1P51668 147 aa5.05□□□□□ -1.6
SEMA3F-209ENST00000493743 MP68P56378 58 aa5.05□□□□□ -1.6
SEMA3F-209ENST00000493743 MIAQ16674 131 aa5.05□□□□□ -1.6
SEMA3F-209ENST00000493743 Q6ZVQ6 151 aa5.05□□□□□ -1.6
SEMA3F-209ENST00000493743 FAM104AQ969W3 186 aa5.05□□□□□ -1.6
SEMA3F-209ENST00000493743 FXYD2P54710 66 aa5.04□□□□□ -1.6
SEMA3F-209ENST00000493743 SFTA2Q6UW10 78 aa5.04□□□□□ -1.6
SEMA3F-209ENST00000493743 FP248Q71RG6 208 aaPredicted RBP5.04□□□□□ -1.6
SEMA3F-209ENST00000493743 Q75L30 129 aa5.04□□□□□ -1.6
SEMA3F-209ENST00000493743 NOTCH2NLQ7Z3S9 236 aa5.04□□□□□ -1.6
SEMA3F-209ENST00000493743 C9orf163Q8N9P6 203 aa5.04□□□□□ -1.6
SEMA3F-209ENST00000493743 UBR4Q5T4S7 5183 aa5.04□□□□□ -1.6
SEMA3F-209ENST00000493743 SS18Q15532 418 aa5.03□□□□□ -1.6
SEMA3F-209ENST00000493743 TMEM223A0PJW6 202 aa5.02□□□□□ -1.61
SEMA3F-209ENST00000493743 A8MUN3 132 aa5.02□□□□□ -1.61
SEMA3F-209ENST00000493743 TMEM256-PLSCR3K7ERE1 68 aa5.02□□□□□ -1.61
SEMA3F-209ENST00000493743 LST1O00453 97 aa5.02□□□□□ -1.61
SEMA3F-209ENST00000493743 LEPROTO15243 131 aa5.02□□□□□ -1.61
SEMA3F-209ENST00000493743 ZNF22P17026 224 aaPredicted RBP5.02□□□□□ -1.61
SEMA3F-209ENST00000493743 LINC00242Q5T6M2 205 aa5.02□□□□□ -1.61
SEMA3F-209ENST00000493743 CLPSL2Q6UWE3 100 aa5.02□□□□□ -1.61
SEMA3F-209ENST00000493743 NKAPP1Q8N9T2 125 aa5.02□□□□□ -1.61
SEMA3F-209ENST00000493743 OPRPNQ99935 248 aaPredicted RBP5.02□□□□□ -1.61
SEMA3F-209ENST00000493743 PRR34Q9NV39 138 aa5.02□□□□□ -1.61
SEMA3F-209ENST00000493743 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.02□□□□□ -1.61
SEMA3F-209ENST00000493743 A0A087WZ39 114 aa5.01□□□□□ -1.61
SEMA3F-209ENST00000493743 A0A0B4J2C4 111 aa5.01□□□□□ -1.61
SEMA3F-209ENST00000493743 A0A0J9YXV3 536 aa5.01□□□□□ -1.61
SEMA3F-209ENST00000493743 TRBV10-2A0A0K0K1G8 114 aa5.01□□□□□ -1.61
SEMA3F-209ENST00000493743 ATXN8Q156A1 80 aa5.01□□□□□ -1.61
SEMA3F-209ENST00000493743 KRTAP26-1Q6PEX3 210 aa5.01□□□□□ -1.61
SEMA3F-209ENST00000493743 LINC00269Q8N2A0 174 aa5.01□□□□□ -1.61
SEMA3F-209ENST00000493743 IGLV4-60A0A075B6I1 120 aa5□□□□□ -1.61
SEMA3F-209ENST00000493743 IGLV5-39A0A0G2JS06 123 aa5□□□□□ -1.61
SEMA3F-209ENST00000493743 LINC00959A0A1B0GUT2 108 aa5□□□□□ -1.61
SEMA3F-209ENST00000493743 PANO1I0J062 215 aa5□□□□□ -1.61
SEMA3F-209ENST00000493743 COX7A2LO14548 114 aa5□□□□□ -1.61
SEMA3F-209ENST00000493743 PSPHP1O15172 72 aa5□□□□□ -1.61
SEMA3F-209ENST00000493743 CCKP06307 115 aa5□□□□□ -1.61
SEMA3F-209ENST00000493743 KIAA0087Q14695 138 aa5□□□□□ -1.61
SEMA3F-209ENST00000493743 SDIM1Q6ZPB5 146 aa5□□□□□ -1.61
SEMA3F-209ENST00000493743 IGLV10-54A0A075B6I4 117 aa4.99□□□□□ -1.61
SEMA3F-209ENST00000493743 LOC107984156A0A0G2JMH3 177 aa4.99□□□□□ -1.61
SEMA3F-209ENST00000493743 MT1HL1P0DM35 61 aa4.99□□□□□ -1.61
SEMA3F-209ENST00000493743 UBE2AP49459 152 aa4.99□□□□□ -1.61
SEMA3F-209ENST00000493743 CNBPP62633 177 aaKnown RBP4.99□□□□□ -1.61
SEMA3F-209ENST00000493743 REG3AQ06141 175 aa4.99□□□□□ -1.61
SEMA3F-209ENST00000493743 CIRBPQ14011 172 aaKnown RBP4.99□□□□□ -1.61
SEMA3F-209ENST00000493743 ARL17AQ8IVW1 177 aa4.99□□□□□ -1.61
SEMA3F-209ENST00000493743 HIST1H4GQ99525 98 aa4.99□□□□□ -1.61
SEMA3F-209ENST00000493743 IGHV3-64A0A075B6Q5 118 aa4.98□□□□□ -1.61
SEMA3F-209ENST00000493743 ATP11AUNQ6ZP68 121 aa4.98□□□□□ -1.61
SEMA3F-209ENST00000493743 C7orf65Q6ZTY9 151 aa4.98□□□□□ -1.61
SEMA3F-209ENST00000493743 CDKN2A-AS1Q9UH64 79 aa4.98□□□□□ -1.61
SEMA3F-209ENST00000493743 IGKV2D-26A0A0A0MRZ7 120 aa4.97□□□□□ -1.61
SEMA3F-209ENST00000493743 A0A0J9YXY3 114 aa4.97□□□□□ -1.61
SEMA3F-209ENST00000493743 ZNF815PA8K554 130 aa4.97□□□□□ -1.61
SEMA3F-209ENST00000493743 SMIM1B2RUZ4 78 aa4.97□□□□□ -1.61
SEMA3F-209ENST00000493743 K7ERJ3 54 aa4.97□□□□□ -1.61
SEMA3F-209ENST00000493743 PRR3P79522 188 aaKnown RBP4.97□□□□□ -1.61
SEMA3F-209ENST00000493743 RBM3P98179 157 aaKnown RBP4.97□□□□□ -1.61
SEMA3F-209ENST00000493743 RNASE13Q5GAN3 156 aaKnown RBP4.97□□□□□ -1.61
SEMA3F-209ENST00000493743 A0A087WYN8 130 aa4.96□□□□□ -1.62
SEMA3F-209ENST00000493743 NDUFA1O15239 70 aa4.96□□□□□ -1.62
SEMA3F-209ENST00000493743 CHTF8P0CG12 524 aa4.96□□□□□ -1.62
SEMA3F-209ENST00000493743 SEC61BP60468 96 aaKnown RBP4.96□□□□□ -1.62
SEMA3F-209ENST00000493743 Q8IZM0 81 aa4.96□□□□□ -1.62
SEMA3F-209ENST00000493743 SPACA4Q8TDM5 124 aa4.96□□□□□ -1.62
SEMA3F-209ENST00000493743 DIRC1Q969H9 104 aa4.96□□□□□ -1.62
SEMA3F-209ENST00000493743 TP73-AS1Q9UF72 201 aa4.96□□□□□ -1.62
SEMA3F-209ENST00000493743 NDUFA12Q9UI09 145 aa4.96□□□□□ -1.62
SEMA3F-209ENST00000493743 TRAV13-2A0A0B4J235 113 aa4.95□□□□□ -1.62
SEMA3F-209ENST00000493743 A0A1B0GW54 56 aa4.95□□□□□ -1.62
SEMA3F-209ENST00000493743 SLPIP03973 132 aa4.95□□□□□ -1.62
SEMA3F-209ENST00000493743 COX6A2Q02221 97 aa4.95□□□□□ -1.62
SEMA3F-209ENST00000493743 KLKP1Q107X0 134 aa4.95□□□□□ -1.62
SEMA3F-209ENST00000493743 Q1T7F1 81 aa4.95□□□□□ -1.62
SEMA3F-209ENST00000493743 DAND5Q8N907 189 aa4.95□□□□□ -1.62
SEMA3F-209ENST00000493743 C7orf33Q8WU49 177 aa4.95□□□□□ -1.62
SEMA3F-209ENST00000493743 CHCHD10Q8WYQ3 142 aaPredicted RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms