RNA–Protein interactions for RNA: ENST00000493660.5

SMARCE1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-211ENST00000493660 A0A096LPF7 62 aa4.93□□□□□ -1.62
SMARCE1-211ENST00000493660 NREPQ16612 68 aa4.93□□□□□ -1.62
SMARCE1-211ENST00000493660 DEFB104AQ8WTQ1 72 aa4.92□□□□□ -1.62
SMARCE1-211ENST00000493660 NBEAL2Q6ZNJ1 2754 aa4.92□□□□□ -1.62
SMARCE1-211ENST00000493660 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.92□□□□□ -1.62
SMARCE1-211ENST00000493660 IGKV2-29A2NJV5 120 aaPredicted RBP4.92□□□□□ -1.62
SMARCE1-211ENST00000493660 VPREB1P12018 145 aa4.92□□□□□ -1.62
SMARCE1-211ENST00000493660 UBE2AP49459 152 aa4.92□□□□□ -1.62
SMARCE1-211ENST00000493660 LINC00167Q96N53 147 aa4.92□□□□□ -1.62
SMARCE1-211ENST00000493660 LELP1Q5T871 98 aa4.91□□□□□ -1.62
SMARCE1-211ENST00000493660 DNHD1Q96M86 4753 aa4.91□□□□□ -1.62
SMARCE1-211ENST00000493660 LINC01547P58512 204 aaPredicted RBP4.9□□□□□ -1.62
SMARCE1-211ENST00000493660 SYCNQ0VAF6 134 aa4.9□□□□□ -1.62
SMARCE1-211ENST00000493660 LCA10Q71F78 164 aa4.9□□□□□ -1.62
SMARCE1-211ENST00000493660 IGLV5-45A0A087WSX0 123 aa4.9□□□□□ -1.63
SMARCE1-211ENST00000493660 TRAV22A0A0B4J277 110 aa4.9□□□□□ -1.63
SMARCE1-211ENST00000493660 A0A1B0GUV1 79 aa4.9□□□□□ -1.63
SMARCE1-211ENST00000493660 LECT2O14960 151 aa4.9□□□□□ -1.63
SMARCE1-211ENST00000493660 ATP11AUNQ6ZP68 121 aa4.9□□□□□ -1.63
SMARCE1-211ENST00000493660 FAM104AQ969W3 186 aa4.9□□□□□ -1.63
SMARCE1-211ENST00000493660 TENM3Q9P273 2699 aa4.89□□□□□ -1.63
SMARCE1-211ENST00000493660 IGLV5-39A0A0G2JS06 123 aa4.89□□□□□ -1.63
SMARCE1-211ENST00000493660 C7orf65Q6ZTY9 151 aa4.89□□□□□ -1.63
SMARCE1-211ENST00000493660 FAM19A3Q7Z5A8 133 aa4.89□□□□□ -1.63
SMARCE1-211ENST00000493660 SMIM11BQ8TCY0 68 aa4.89□□□□□ -1.63
SMARCE1-211ENST00000493660 Q9H8V8 135 aa4.89□□□□□ -1.63
SMARCE1-211ENST00000493660 CDC42SE2Q9NRR3 84 aa4.89□□□□□ -1.63
SMARCE1-211ENST00000493660 LINC00269Q8N2A0 174 aa4.88□□□□□ -1.63
SMARCE1-211ENST00000493660 A6NN06 94 aa4.88□□□□□ -1.63
SMARCE1-211ENST00000493660 PSPHP1O15172 72 aa4.88□□□□□ -1.63
SMARCE1-211ENST00000493660 Q8N3U1 123 aa4.88□□□□□ -1.63
SMARCE1-211ENST00000493660 LOC110117498A0A087WWA1 95 aa4.87□□□□□ -1.63
SMARCE1-211ENST00000493660 LCE2CQ5TA81 110 aa4.87□□□□□ -1.63
SMARCE1-211ENST00000493660 PRR26Q8N8Z3 221 aa4.87□□□□□ -1.63
SMARCE1-211ENST00000493660 KRTAP4-7Q9BYR0 210 aa4.87□□□□□ -1.63
SMARCE1-211ENST00000493660 NUPR2A6NF83 97 aa4.86□□□□□ -1.63
SMARCE1-211ENST00000493660 DIRC1Q969H9 104 aa4.86□□□□□ -1.63
SMARCE1-211ENST00000493660 IGLV4-60A0A075B6I1 120 aa4.86□□□□□ -1.63
SMARCE1-211ENST00000493660 LINC00337Q8N6G1 96 aa4.86□□□□□ -1.63
SMARCE1-211ENST00000493660 BPY2O14599 106 aa4.85□□□□□ -1.63
SMARCE1-211ENST00000493660 HAMPP81172 84 aa4.85□□□□□ -1.63
SMARCE1-211ENST00000493660 Q6ZQT0 140 aa4.85□□□□□ -1.63
SMARCE1-211ENST00000493660 KRTAP4-12Q9BQ66 201 aa4.85□□□□□ -1.63
SMARCE1-211ENST00000493660 A8MUN3 132 aa4.85□□□□□ -1.63
SMARCE1-211ENST00000493660 RNASE13Q5GAN3 156 aaKnown RBP4.85□□□□□ -1.63
SMARCE1-211ENST00000493660 C1orf64Q8NEQ6 169 aa4.85□□□□□ -1.63
SMARCE1-211ENST00000493660 CDKN2A-AS1Q9UH64 79 aa4.85□□□□□ -1.63
SMARCE1-211ENST00000493660 DYNC2H1Q8NCM8 4307 aaKnown RBP4.85□□□□□ -1.63
SMARCE1-211ENST00000493660 IGKV2-28A0A075B6P5 120 aa4.84□□□□□ -1.63
SMARCE1-211ENST00000493660 C16orf90A8MZG2 172 aa4.84□□□□□ -1.63
SMARCE1-211ENST00000493660 IGKV2D-28P01615 120 aa4.84□□□□□ -1.63
SMARCE1-211ENST00000493660 SLPIP03973 132 aa4.84□□□□□ -1.63
SMARCE1-211ENST00000493660 PDE6GP18545 87 aa4.84□□□□□ -1.63
SMARCE1-211ENST00000493660 CCL18P55774 89 aa4.84□□□□□ -1.63
SMARCE1-211ENST00000493660 Q5VV11 94 aa4.84□□□□□ -1.63
SMARCE1-211ENST00000493660 CYP4F30PQ9H0H9 118 aa4.84□□□□□ -1.63
SMARCE1-211ENST00000493660 LORP23490 312 aaPredicted RBP4.84□□□□□ -1.64
SMARCE1-211ENST00000493660 LINC01556Q5JQF7 62 aa4.84□□□□□ -1.64
SMARCE1-211ENST00000493660 LINC00242Q5T6M2 205 aa4.84□□□□□ -1.64
SMARCE1-211ENST00000493660 SND1-IT1Q9HBX3 110 aa4.84□□□□□ -1.64
SMARCE1-211ENST00000493660 APLNQ9ULZ1 77 aa4.84□□□□□ -1.64
SMARCE1-211ENST00000493660 LINC00959A0A1B0GUT2 108 aa4.83□□□□□ -1.64
SMARCE1-211ENST00000493660 PSCAO43653 123 aa4.83□□□□□ -1.64
SMARCE1-211ENST00000493660 ANGP03950 147 aaKnown RBP4.83□□□□□ -1.64
SMARCE1-211ENST00000493660 DNAH10OSP0CZ25 163 aa4.83□□□□□ -1.64
SMARCE1-211ENST00000493660 WFDC10BQ8IUB3 73 aa4.83□□□□□ -1.64
SMARCE1-211ENST00000493660 OCR1Q9BZK8 76 aa4.83□□□□□ -1.64
SMARCE1-211ENST00000493660 PRR34Q9NV39 138 aa4.83□□□□□ -1.64
SMARCE1-211ENST00000493660 PRKDCP78527 4128 aaKnown RBP4.83□□□□□ -1.64
SMARCE1-211ENST00000493660 REG3AQ06141 175 aa4.82□□□□□ -1.64
SMARCE1-211ENST00000493660 NKAPP1Q8N9T2 125 aa4.82□□□□□ -1.64
SMARCE1-211ENST00000493660 COL7A1Q02388 2944 aa4.82□□□□□ -1.64
SMARCE1-211ENST00000493660 SMIM1B2RUZ4 78 aa4.81□□□□□ -1.64
SMARCE1-211ENST00000493660 HCG22E2RYF7 251 aa4.81□□□□□ -1.64
SMARCE1-211ENST00000493660 Q8N814 137 aa4.81□□□□□ -1.64
SMARCE1-211ENST00000493660 LIMD2Q9BT23 127 aa4.81□□□□□ -1.64
SMARCE1-211ENST00000493660 MEGF8Q7Z7M0 2845 aa4.81□□□□□ -1.64
SMARCE1-211ENST00000493660 H3BQ85 93 aa4.81□□□□□ -1.64
SMARCE1-211ENST00000493660 COX6A2Q02221 97 aa4.81□□□□□ -1.64
SMARCE1-211ENST00000493660 SPTSSBQ8NFR3 76 aa4.81□□□□□ -1.64
SMARCE1-211ENST00000493660 KRTAP17-1Q9BYP8 105 aa4.81□□□□□ -1.64
SMARCE1-211ENST00000493660 IGHV3OR16-9A0A0B4J2B5 98 aa4.8□□□□□ -1.64
SMARCE1-211ENST00000493660 CHKB-CPT1BH3BT56 60 aa4.8□□□□□ -1.64
SMARCE1-211ENST00000493660 HIGD2AQ9BW72 106 aa4.8□□□□□ -1.64
SMARCE1-211ENST00000493660 KLK12Q9UKR0 248 aa4.8□□□□□ -1.64
SMARCE1-211ENST00000493660 IGKV3OR2-268A0A0C4DH90 116 aa4.8□□□□□ -1.64
SMARCE1-211ENST00000493660 LCE6AA0A183 80 aa4.8□□□□□ -1.64
SMARCE1-211ENST00000493660 LRCOL1A6NCL2 159 aa4.8□□□□□ -1.64
SMARCE1-211ENST00000493660 A8MU10 97 aa4.79□□□□□ -1.64
SMARCE1-211ENST00000493660 CLPSL2Q6UWE3 100 aa4.79□□□□□ -1.64
SMARCE1-211ENST00000493660 MUC7Q8TAX7 377 aa4.79□□□□□ -1.64
SMARCE1-211ENST00000493660 CHCHD10Q8WYQ3 142 aaPredicted RBP4.79□□□□□ -1.64
SMARCE1-211ENST00000493660 WWC2-AS2Q96NR7 200 aa4.79□□□□□ -1.64
SMARCE1-211ENST00000493660 DNAH7Q8WXX0 4024 aa4.79□□□□□ -1.64
SMARCE1-211ENST00000493660 SERTAD4-AS1Q5TG53 156 aa4.79□□□□□ -1.64
SMARCE1-211ENST00000493660 UBE2DNLQ8IWF7 75 aa4.79□□□□□ -1.64
SMARCE1-211ENST00000493660 STAB2Q8WWQ8 2551 aa4.78□□□□□ -1.64
SMARCE1-211ENST00000493660 Q75L30 129 aa4.78□□□□□ -1.64
SMARCE1-211ENST00000493660 CDC42SE1Q9NRR8 79 aa4.77□□□□□ -1.65
SMARCE1-211ENST00000493660 KRTAP26-1Q6PEX3 210 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms