RNA–Protein interactions for RNA: ENST00000493377.1

SYCP1-208, Transcript of synaptonemal complex protein 1, humanhuman

TSL 3

Gene SYCP1, Length 783 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-208ENST00000493377 CFAP46Q8IYW2 2715 aa-1.02□□□□□ -2.57
SYCP1-208ENST00000493377 TRAV30A0A087WSZ9 112 aa-1.02□□□□□ -2.57
SYCP1-208ENST00000493377 CRYM-AS1A6NIL9 109 aa-1.02□□□□□ -2.57
SYCP1-208ENST00000493377 ACACBO00763 2458 aa-1.02□□□□□ -2.57
SYCP1-208ENST00000493377 C5P01031 1676 aa-1.02□□□□□ -2.57
SYCP1-208ENST00000493377 MT1EP04732 61 aa-1.02□□□□□ -2.57
SYCP1-208ENST00000493377 ARMS2P0C7Q2 107 aa-1.02□□□□□ -2.57
SYCP1-208ENST00000493377 SNCAP37840 140 aa-1.02□□□□□ -2.57
SYCP1-208ENST00000493377 KRTAP19-5Q3LI72 72 aa-1.02□□□□□ -2.57
SYCP1-208ENST00000493377 HEPN1Q6WQI6 88 aa-1.02□□□□□ -2.57
SYCP1-208ENST00000493377 SVBPQ8N300 66 aa-1.02□□□□□ -2.57
SYCP1-208ENST00000493377 CSMD1Q96PZ7 3565 aa-1.02□□□□□ -2.57
SYCP1-208ENST00000493377 HIGD1BQ9P298 99 aa-1.02□□□□□ -2.57
SYCP1-208ENST00000493377 ITPR2Q14571 2701 aa-1.02□□□□□ -2.57
SYCP1-208ENST00000493377 EIF4G3O43432 1585 aaKnown RBP-1.03□□□□□ -2.57
SYCP1-208ENST00000493377 SAMD9Q5K651 1589 aa-1.03□□□□□ -2.57
SYCP1-208ENST00000493377 CUX1P39880 1505 aa-1.03□□□□□ -2.57
SYCP1-208ENST00000493377 TMEM262E9PQX1 116 aa-1.03□□□□□ -2.57
SYCP1-208ENST00000493377 SNAPC5O75971 98 aa-1.03□□□□□ -2.57
SYCP1-208ENST00000493377 PPP3R1P63098 170 aa-1.03□□□□□ -2.57
SYCP1-208ENST00000493377 HSD52Q0P140 79 aa-1.03□□□□□ -2.57
SYCP1-208ENST00000493377 RPL13AP3Q6NVV1 102 aa-1.03□□□□□ -2.57
SYCP1-208ENST00000493377 CLPSL2Q6UWE3 100 aa-1.03□□□□□ -2.57
SYCP1-208ENST00000493377 WFDC13Q8IUB5 93 aa-1.03□□□□□ -2.57
SYCP1-208ENST00000493377 MT1LQ93083 61 aa-1.03□□□□□ -2.57
SYCP1-208ENST00000493377 VAMP8Q9BV40 100 aa-1.03□□□□□ -2.57
SYCP1-208ENST00000493377 QSER1Q2KHR3 1735 aa-1.03□□□□□ -2.58
SYCP1-208ENST00000493377 FRYQ5TBA9 3013 aa-1.04□□□□□ -2.58
SYCP1-208ENST00000493377 PZPP20742 1482 aa-1.04□□□□□ -2.58
SYCP1-208ENST00000493377 TRBV25-1A0A075B6N4 114 aa-1.04□□□□□ -2.58
SYCP1-208ENST00000493377 CORTO00230 105 aa-1.04□□□□□ -2.58
SYCP1-208ENST00000493377 DLEU1O43261 78 aa-1.04□□□□□ -2.58
SYCP1-208ENST00000493377 DEFB107AQ8IZN7 70 aa-1.04□□□□□ -2.58
SYCP1-208ENST00000493377 FAM107BQ9H098 131 aa-1.04□□□□□ -2.58
SYCP1-208ENST00000493377 CDC42BPGQ6DT37 1551 aa-1.04□□□□□ -2.58
SYCP1-208ENST00000493377 C5orf42Q9H799 3197 aa-1.05□□□□□ -2.58
SYCP1-208ENST00000493377 SPTY2D1-AS1A0A0U1RR47 76 aa-1.05□□□□□ -2.58
SYCP1-208ENST00000493377 hADV29S1A0JD25 119 aa-1.05□□□□□ -2.58
SYCP1-208ENST00000493377 EFCAB10A6NFE3 127 aa-1.05□□□□□ -2.58
SYCP1-208ENST00000493377 SMR3BP02814 79 aaPredicted RBP-1.05□□□□□ -2.58
SYCP1-208ENST00000493377 MAP3K1Q13233 1512 aa-1.05□□□□□ -2.58
SYCP1-208ENST00000493377 ABCC5O15440 1437 aa-1.06□□□□□ -2.58
SYCP1-208ENST00000493377 TRBV7-7A0A0K0K1E9 115 aa-1.06□□□□□ -2.58
SYCP1-208ENST00000493377 H7BZZ5 65 aa-1.06□□□□□ -2.58
SYCP1-208ENST00000493377 NDUFC1O43677 76 aa-1.06□□□□□ -2.58
SYCP1-208ENST00000493377 GNGT1P63211 74 aa-1.06□□□□□ -2.58
SYCP1-208ENST00000493377 CACFD1Q9UGQ2 172 aa-1.06□□□□□ -2.58
SYCP1-208ENST00000493377 PRDM15P57071 1507 aaPredicted RBP-1.06□□□□□ -2.58
SYCP1-208ENST00000493377 ABCC2Q92887 1545 aa-1.06□□□□□ -2.58
SYCP1-208ENST00000493377 MLH3Q9UHC1 1453 aa-1.06□□□□□ -2.58
SYCP1-208ENST00000493377 CRYBG1Q9Y4K1 1723 aa-1.06□□□□□ -2.58
SYCP1-208ENST00000493377 MYO9AB2RTY4 2548 aa-1.07□□□□□ -2.58
SYCP1-208ENST00000493377 TLN1Q9Y490 2541 aaKnown RBP-1.07□□□□□ -2.58
SYCP1-208ENST00000493377 ALKQ9UM73 1620 aa-1.07□□□□□ -2.58
SYCP1-208ENST00000493377 FAM186AA6NE01 2351 aa-1.07□□□□□ -2.58
SYCP1-208ENST00000493377 MPC2O95563 127 aa-1.07□□□□□ -2.58
SYCP1-208ENST00000493377 PSMG4Q5JS54 123 aa-1.07□□□□□ -2.58
SYCP1-208ENST00000493377 WFDC9Q8NEX5 89 aa-1.07□□□□□ -2.58
SYCP1-208ENST00000493377 RGPD8O14715 1765 aaPredicted RBP-1.07□□□□□ -2.58
SYCP1-208ENST00000493377 RGPD5Q99666 1765 aa-1.07□□□□□ -2.58
SYCP1-208ENST00000493377 PREX1Q8TCU6 1659 aa-1.07□□□□□ -2.58
SYCP1-208ENST00000493377 UBR3Q6ZT12 1888 aa-1.07□□□□□ -2.58
SYCP1-208ENST00000493377 SPENQ96T58 3664 aaKnown RBP-1.08□□□□□ -2.58
SYCP1-208ENST00000493377 PKD1L3Q7Z443 1732 aa-1.08□□□□□ -2.58
SYCP1-208ENST00000493377 TRRAPQ9Y4A5 3859 aa-1.08□□□□□ -2.58
SYCP1-208ENST00000493377 PMCHL1Q16048 86 aa-1.08□□□□□ -2.58
SYCP1-208ENST00000493377 MYH4Q9Y623 1939 aa-1.09□□□□□ -2.58
SYCP1-208ENST00000493377 C4AP0C0L4 1744 aa-1.09□□□□□ -2.58
SYCP1-208ENST00000493377 C4BP0C0L5 1744 aa-1.09□□□□□ -2.58
SYCP1-208ENST00000493377 RAPGEF2Q9Y4G8 1499 aa-1.09□□□□□ -2.58
SYCP1-208ENST00000493377 A0A1B0GV90 55 aa-1.09□□□□□ -2.58
SYCP1-208ENST00000493377 ASIPP42127 132 aa-1.09□□□□□ -2.58
SYCP1-208ENST00000493377 NMSQ5H8A3 153 aa-1.09□□□□□ -2.58
SYCP1-208ENST00000493377 COX6B2Q6YFQ2 88 aa-1.09□□□□□ -2.58
SYCP1-208ENST00000493377 TRGV9Q99603 122 aa-1.09□□□□□ -2.58
SYCP1-208ENST00000493377 DEFB4AO15263 64 aa-1.1□□□□□ -2.59
SYCP1-208ENST00000493377 DNAH5Q8TE73 4624 aa-1.1□□□□□ -2.59
SYCP1-208ENST00000493377 RANBP2P49792 3224 aaKnown RBP-1.1□□□□□ -2.59
SYCP1-208ENST00000493377 FAM135AQ9P2D6 1515 aa-1.1□□□□□ -2.59
SYCP1-208ENST00000493377 LRBAP50851 2863 aa-1.1□□□□□ -2.59
SYCP1-208ENST00000493377 MAGI2Q86UL8 1455 aa-1.11□□□□□ -2.59
SYCP1-208ENST00000493377 NRXN1Q9ULB1 1477 aa-1.11□□□□□ -2.59
SYCP1-208ENST00000493377 CEP290O15078 2479 aa-1.11□□□□□ -2.59
SYCP1-208ENST00000493377 DNAH8Q96JB1 4490 aa-1.11□□□□□ -2.59
SYCP1-208ENST00000493377 DMXL2Q8TDJ6 3036 aa-1.11□□□□□ -2.59
SYCP1-208ENST00000493377 MRPS10P82664 201 aaKnown RBP-1.11□□□□□ -2.59
SYCP1-208ENST00000493377 HMGN3Q15651 99 aa-1.11□□□□□ -2.59
SYCP1-208ENST00000493377 ALKAL2Q6UX46 152 aa-1.11□□□□□ -2.59
SYCP1-208ENST00000493377 TMEM203Q969S6 136 aa-1.11□□□□□ -2.59
SYCP1-208ENST00000493377 C2orf88Q9BSF0 95 aa-1.11□□□□□ -2.59
SYCP1-208ENST00000493377 PSENENQ9NZ42 101 aa-1.11□□□□□ -2.59
SYCP1-208ENST00000493377 ADGRG4Q8IZF6 3080 aa-1.11□□□□□ -2.59
SYCP1-208ENST00000493377 ZFYVE16Q7Z3T8 1539 aa-1.11□□□□□ -2.59
SYCP1-208ENST00000493377 TIAM2Q8IVF5 1701 aa-1.12□□□□□ -2.59
SYCP1-208ENST00000493377 UQCRHP07919 91 aa-1.12□□□□□ -2.59
SYCP1-208ENST00000493377 S100A1P23297 94 aa-1.12□□□□□ -2.59
SYCP1-208ENST00000493377 KRTAP8-1Q8IUC2 63 aa-1.12□□□□□ -2.59
SYCP1-208ENST00000493377 UBE2D4Q9Y2X8 147 aa-1.12□□□□□ -2.59
SYCP1-208ENST00000493377 AP4S1Q9Y587 144 aa-1.12□□□□□ -2.59
SYCP1-208ENST00000493377 CDC42BPAQ5VT25 1732 aa-1.12□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms