RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 COX4I1P13073 169 aa0.03□□□□□ -2.4
VTA1-204ENST00000491881 CCL3L1P16619 93 aa0.03□□□□□ -2.4
VTA1-204ENST00000491881 BTG2P78543 158 aa0.03□□□□□ -2.4
VTA1-204ENST00000491881 COX6A2Q02221 97 aa0.03□□□□□ -2.4
VTA1-204ENST00000491881 MORN2Q502X0 79 aa0.03□□□□□ -2.4
VTA1-204ENST00000491881 AKAP14Q86UN6 197 aa0.03□□□□□ -2.4
VTA1-204ENST00000491881 GVQW2A0A096LPI5 108 aaPredicted RBP0.02□□□□□ -2.41
VTA1-204ENST00000491881 H3BNG1 76 aa0.02□□□□□ -2.41
VTA1-204ENST00000491881 NCS1P62166 190 aa0.02□□□□□ -2.41
VTA1-204ENST00000491881 KRTAP6-1Q3LI64 71 aa0.02□□□□□ -2.41
VTA1-204ENST00000491881 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.02□□□□□ -2.41
VTA1-204ENST00000491881 C4orf33Q8N1A6 199 aa0.02□□□□□ -2.41
VTA1-204ENST00000491881 C20orf197Q8N268 126 aa0.02□□□□□ -2.41
VTA1-204ENST00000491881 FAM213BQ8TBF2 198 aa0.02□□□□□ -2.41
VTA1-204ENST00000491881 TTTY10Q9BZA0 68 aa0.02□□□□□ -2.41
VTA1-204ENST00000491881 TRAV12-3A0A0B4J271 114 aa0.01□□□□□ -2.41
VTA1-204ENST00000491881 CCDC179H3BU77 68 aa0.01□□□□□ -2.41
VTA1-204ENST00000491881 NDUFA2O43678 99 aa0.01□□□□□ -2.41
VTA1-204ENST00000491881 SCGB1A1P11684 91 aa0.01□□□□□ -2.41
VTA1-204ENST00000491881 DR1Q01658 176 aa0.01□□□□□ -2.41
VTA1-204ENST00000491881 ALX1Q15699 326 aa0.01□□□□□ -2.41
VTA1-204ENST00000491881 LINC01545Q5VT33 79 aa0.01□□□□□ -2.41
VTA1-204ENST00000491881 SMIM11BQ8TCY0 68 aa0.01□□□□□ -2.41
VTA1-204ENST00000491881 KAAG1Q9UBP8 84 aa0.01□□□□□ -2.41
VTA1-204ENST00000491881 TRBV20-1A0A075B6N2 111 aa0□□□□□ -2.41
VTA1-204ENST00000491881 FXYD6-FXYD2A0A087WZ82 144 aa0□□□□□ -2.41
VTA1-204ENST00000491881 FAM236AA0A1B0GUQ0 79 aa0□□□□□ -2.41
VTA1-204ENST00000491881 FAM236BA0A1B0GV22 79 aa0□□□□□ -2.41
VTA1-204ENST00000491881 NMBP08949 121 aa0□□□□□ -2.41
VTA1-204ENST00000491881 HIST1H1AQ02539 215 aaPredicted RBP0□□□□□ -2.41
VTA1-204ENST00000491881 SSBP1Q04837 148 aaKnown RBP0□□□□□ -2.41
VTA1-204ENST00000491881 MINOS1Q5TGZ0 78 aa0□□□□□ -2.41
VTA1-204ENST00000491881 MIC13Q5XKP0 118 aa0□□□□□ -2.41
VTA1-204ENST00000491881 COX7B2Q8TF08 81 aa0□□□□□ -2.41
VTA1-204ENST00000491881 PYDC1Q8WXC3 89 aa0□□□□□ -2.41
VTA1-204ENST00000491881 MT1LQ93083 61 aa0□□□□□ -2.41
VTA1-204ENST00000491881 Q96NJ1 140 aa0□□□□□ -2.41
VTA1-204ENST00000491881 SMIM3Q9BZL3 60 aa0□□□□□ -2.41
VTA1-204ENST00000491881 NDUFA12Q9UI09 145 aa0□□□□□ -2.41
VTA1-204ENST00000491881 TRBV7-1A0A0A6YYK4 115 aa-0.01□□□□□ -2.41
VTA1-204ENST00000491881 MT1AP04731 61 aa-0.01□□□□□ -2.41
VTA1-204ENST00000491881 ACYP2P14621 99 aa-0.01□□□□□ -2.41
VTA1-204ENST00000491881 FAM74A4Q5TZK3 123 aa-0.01□□□□□ -2.41
VTA1-204ENST00000491881 SLC48A1Q6P1K1 146 aa-0.01□□□□□ -2.41
VTA1-204ENST00000491881 MMGT1Q8N4V1 131 aa-0.01□□□□□ -2.41
VTA1-204ENST00000491881 VSTM2AQ8TAG5 236 aa-0.01□□□□□ -2.41
VTA1-204ENST00000491881 TMEM242Q9NWH2 141 aa-0.01□□□□□ -2.41
VTA1-204ENST00000491881 UBE2D4Q9Y2X8 147 aa-0.01□□□□□ -2.41
VTA1-204ENST00000491881 A0A096LPF7 62 aa-0.02□□□□□ -2.41
VTA1-204ENST00000491881 ARPC5O15511 151 aa-0.02□□□□□ -2.41
VTA1-204ENST00000491881 MRPL33O75394 65 aaKnown RBP-0.02□□□□□ -2.41
VTA1-204ENST00000491881 IGLC6P0CF74 106 aa-0.02□□□□□ -2.41
VTA1-204ENST00000491881 CKS1BP61024 79 aa-0.02□□□□□ -2.41
VTA1-204ENST00000491881 GSKIPQ9P0R6 139 aa-0.02□□□□□ -2.41
VTA1-204ENST00000491881 HILPDAQ9Y5L2 63 aa-0.02□□□□□ -2.41
VTA1-204ENST00000491881 V9GYV3 84 aa-0.02□□□□□ -2.41
VTA1-204ENST00000491881 SPAG11AQ6PDA7 123 aa-0.03□□□□□ -2.41
VTA1-204ENST00000491881 WFDC10BQ8IUB3 73 aa-0.03□□□□□ -2.41
VTA1-204ENST00000491881 LEAP2Q969E1 77 aa-0.03□□□□□ -2.41
VTA1-204ENST00000491881 LINC00694P0DN24 101 aa-0.04□□□□□ -2.42
VTA1-204ENST00000491881 CBLN1P23435 193 aa-0.04□□□□□ -2.42
VTA1-204ENST00000491881 LINC01556Q5JQF7 62 aa-0.04□□□□□ -2.42
VTA1-204ENST00000491881 SPANXN1Q5VSR9 72 aa-0.04□□□□□ -2.42
VTA1-204ENST00000491881 LZICQ8WZA0 190 aa-0.04□□□□□ -2.42
VTA1-204ENST00000491881 TRGV1A0A0A0MS02 117 aa-0.05□□□□□ -2.42
VTA1-204ENST00000491881 G3V318 75 aa-0.05□□□□□ -2.42
VTA1-204ENST00000491881 CTAGE3PQ8IX95 158 aa-0.05□□□□□ -2.42
VTA1-204ENST00000491881 WFDC6Q9BQY6 131 aa-0.05□□□□□ -2.42
VTA1-204ENST00000491881 SAR1AQ9NR31 198 aa-0.05□□□□□ -2.42
VTA1-204ENST00000491881 GYPAP02724 150 aa-0.06□□□□□ -2.42
VTA1-204ENST00000491881 GCHFRP30047 84 aa-0.06□□□□□ -2.42
VTA1-204ENST00000491881 RPL7L1Q6DKI1 246 aaKnown RBP-0.06□□□□□ -2.42
VTA1-204ENST00000491881 Q6ZRX8 168 aa-0.06□□□□□ -2.42
VTA1-204ENST00000491881 Q6ZUT4 128 aa-0.06□□□□□ -2.42
VTA1-204ENST00000491881 TMEM14DPA8MWL7 114 aa-0.07□□□□□ -2.42
VTA1-204ENST00000491881 OOSP1A8MZH6 123 aa-0.07□□□□□ -2.42
VTA1-204ENST00000491881 J3QR89 54 aa-0.07□□□□□ -2.42
VTA1-204ENST00000491881 K7ERU9 68 aa-0.07□□□□□ -2.42
VTA1-204ENST00000491881 M0R2Z0 102 aa-0.07□□□□□ -2.42
VTA1-204ENST00000491881 EDDM3BP56851 147 aa-0.07□□□□□ -2.42
VTA1-204ENST00000491881 PSMG3Q9BT73 122 aaPredicted RBP-0.07□□□□□ -2.42
VTA1-204ENST00000491881 BATF3Q9NR55 127 aa-0.07□□□□□ -2.42
VTA1-204ENST00000491881 RPRMQ9NS64 109 aa-0.07□□□□□ -2.42
VTA1-204ENST00000491881 TSPAN19P0C672 248 aa-0.08□□□□□ -2.42
VTA1-204ENST00000491881 DEFB130BP0DP73 79 aa-0.08□□□□□ -2.42
VTA1-204ENST00000491881 DEFB130AP0DP74 79 aa-0.08□□□□□ -2.42
VTA1-204ENST00000491881 TPPP2P59282 170 aa-0.08□□□□□ -2.42
VTA1-204ENST00000491881 LINC00470Q9BZP3 86 aa-0.08□□□□□ -2.42
VTA1-204ENST00000491881 TRAV1-2A0A0B4J238 106 aa-0.09□□□□□ -2.42
VTA1-204ENST00000491881 C9orf92A6NGG3 77 aa-0.09□□□□□ -2.42
VTA1-204ENST00000491881 H3BUA1 57 aa-0.09□□□□□ -2.42
VTA1-204ENST00000491881 IL5P05113 134 aa-0.09□□□□□ -2.42
VTA1-204ENST00000491881 UBE2G1P62253 170 aa-0.09□□□□□ -2.42
VTA1-204ENST00000491881 C9orf116Q5BN46 136 aaPredicted RBP-0.09□□□□□ -2.42
VTA1-204ENST00000491881 S100A7L2Q5SY68 101 aa-0.09□□□□□ -2.42
VTA1-204ENST00000491881 RPS27LQ71UM5 84 aaKnown RBP-0.09□□□□□ -2.42
VTA1-204ENST00000491881 LINC00474Q9P2X8 69 aa-0.09□□□□□ -2.42
VTA1-204ENST00000491881 SCP2D1Q9UJQ7 156 aa-0.09□□□□□ -2.42
VTA1-204ENST00000491881 A6NIN4 97 aa-0.1□□□□□ -2.43
VTA1-204ENST00000491881 NCR2O95944 276 aa-0.1□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms