RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 RPL28P46779 137 aaKnown RBP7.62□□□□□ -1.19
USF1-206ENST00000491629 PYGO1Q9Y3Y4 419 aa7.62□□□□□ -1.19
USF1-206ENST00000491629 IGLV7-46A0A075B6I9 117 aa7.61□□□□□ -1.19
USF1-206ENST00000491629 K7ERJ3 54 aa7.61□□□□□ -1.19
USF1-206ENST00000491629 MRPL55Q7Z7F7 128 aaKnown RBP7.61□□□□□ -1.19
USF1-206ENST00000491629 LINC01561Q8N1V8 128 aa7.61□□□□□ -1.19
USF1-206ENST00000491629 KRTAP4-1Q9BYQ7 146 aa7.61□□□□□ -1.19
USF1-206ENST00000491629 CRCT1Q9UGL9 99 aa7.61□□□□□ -1.19
USF1-206ENST00000491629 DPM2O94777 84 aa7.6□□□□□ -1.19
USF1-206ENST00000491629 IGKCP01834 107 aa7.6□□□□□ -1.19
USF1-206ENST00000491629 ORMDL3Q8N138 153 aa7.6□□□□□ -1.19
USF1-206ENST00000491629 LINC00304Q8N9R0 145 aa7.6□□□□□ -1.19
USF1-206ENST00000491629 LINC00167Q96N53 147 aa7.6□□□□□ -1.19
USF1-206ENST00000491629 RPL37AP8A6NKH3 93 aa7.59□□□□□ -1.19
USF1-206ENST00000491629 IFI27P40305 119 aaPredicted RBP7.59□□□□□ -1.19
USF1-206ENST00000491629 TMEM141Q96I45 108 aa7.59□□□□□ -1.19
USF1-206ENST00000491629 MYMXA0A1B0GTQ4 84 aa7.58□□□□□ -1.2
USF1-206ENST00000491629 A0A1B0GX51 115 aa7.58□□□□□ -1.2
USF1-206ENST00000491629 CCDC179H3BU77 68 aa7.58□□□□□ -1.2
USF1-206ENST00000491629 SNCGO76070 127 aa7.58□□□□□ -1.2
USF1-206ENST00000491629 Q8IZM0 81 aa7.58□□□□□ -1.2
USF1-206ENST00000491629 TOMM7Q9P0U1 55 aa7.58□□□□□ -1.2
USF1-206ENST00000491629 RPS28P62857 69 aaKnown RBP7.57□□□□□ -1.2
USF1-206ENST00000491629 FAM229BQ4G0N7 80 aa7.57□□□□□ -1.2
USF1-206ENST00000491629 AMELXQ99217 191 aa7.57□□□□□ -1.2
USF1-206ENST00000491629 IGKV2D-26A0A0A0MRZ7 120 aa7.56□□□□□ -1.2
USF1-206ENST00000491629 C6orf226Q5I0X4 101 aa7.56□□□□□ -1.2
USF1-206ENST00000491629 HIST1H4GQ99525 98 aa7.56□□□□□ -1.2
USF1-206ENST00000491629 PPDPFQ9H3Y8 114 aa7.56□□□□□ -1.2
USF1-206ENST00000491629 NXT2Q9NPJ8 142 aaKnown RBP7.56□□□□□ -1.2
USF1-206ENST00000491629 PRSS2P07478 247 aa7.55□□□□□ -1.2
USF1-206ENST00000491629 FAM19A3Q7Z5A8 133 aa7.55□□□□□ -1.2
USF1-206ENST00000491629 SCGB1C2P0DMR2 95 aa7.54□□□□□ -1.2
USF1-206ENST00000491629 PLNP26678 52 aa7.54□□□□□ -1.2
USF1-206ENST00000491629 MEIG1Q5JSS6 88 aa7.54□□□□□ -1.2
USF1-206ENST00000491629 C2orf66Q6UXQ4 117 aa7.54□□□□□ -1.2
USF1-206ENST00000491629 CDKN2A-AS1Q9UH64 79 aa7.54□□□□□ -1.2
USF1-206ENST00000491629 TRAV12-1A0A0B4J245 112 aa7.53□□□□□ -1.2
USF1-206ENST00000491629 F8VRH5 84 aa7.53□□□□□ -1.2
USF1-206ENST00000491629 IMUPQ9GZP8 106 aa7.53□□□□□ -1.2
USF1-206ENST00000491629 IGLV5-37A0A075B6J1 123 aa7.52□□□□□ -1.21
USF1-206ENST00000491629 FAM240AA0A1B0GVK7 77 aa7.52□□□□□ -1.21
USF1-206ENST00000491629 C3orf22Q8N5N4 141 aa7.52□□□□□ -1.21
USF1-206ENST00000491629 TRBV7-7A0A0K0K1E9 115 aa7.51□□□□□ -1.21
USF1-206ENST00000491629 IGIPA6NJ69 53 aa7.51□□□□□ -1.21
USF1-206ENST00000491629 PSMB2P49721 201 aa7.51□□□□□ -1.21
USF1-206ENST00000491629 ASB16-AS1Q495Z4 193 aa7.51□□□□□ -1.21
USF1-206ENST00000491629 ANKRD29Q8N6D5 301 aa7.51□□□□□ -1.21
USF1-206ENST00000491629 LOC389332A0A1B0GUA5 103 aa7.5□□□□□ -1.21
USF1-206ENST00000491629 J3KT08 172 aa7.5□□□□□ -1.21
USF1-206ENST00000491629 UBE2AP49459 152 aa7.5□□□□□ -1.21
USF1-206ENST00000491629 PRLHP81277 87 aa7.5□□□□□ -1.21
USF1-206ENST00000491629 KRTAP13-3Q3SY46 172 aa7.5□□□□□ -1.21
USF1-206ENST00000491629 Q8N8P6 123 aa7.5□□□□□ -1.21
USF1-206ENST00000491629 OR13C6PQ8NH95 151 aa7.5□□□□□ -1.21
USF1-206ENST00000491629 LINC01547P58512 204 aaPredicted RBP7.49□□□□□ -1.21
USF1-206ENST00000491629 IGKV2-28A0A075B6P5 120 aa7.48□□□□□ -1.21
USF1-206ENST00000491629 LINC01549A6NIU2 74 aa7.48□□□□□ -1.21
USF1-206ENST00000491629 SMIM1B2RUZ4 78 aa7.48□□□□□ -1.21
USF1-206ENST00000491629 IGKV2D-28P01615 120 aa7.48□□□□□ -1.21
USF1-206ENST00000491629 LCE2CQ5TA81 110 aa7.48□□□□□ -1.21
USF1-206ENST00000491629 K7EMI3 77 aa7.47□□□□□ -1.21
USF1-206ENST00000491629 SLC25A20O43772 301 aa7.47□□□□□ -1.21
USF1-206ENST00000491629 TCL1BO95988 128 aa7.47□□□□□ -1.21
USF1-206ENST00000491629 HERVK_113P63121 156 aa7.47□□□□□ -1.21
USF1-206ENST00000491629 PLEKHB2Q96CS7 222 aa7.47□□□□□ -1.21
USF1-206ENST00000491629 TTTY13Q9BZ97 58 aa7.46□□□□□ -1.22
USF1-206ENST00000491629 LOC107984156A0A0G2JMH3 177 aa7.45□□□□□ -1.22
USF1-206ENST00000491629 UQCRQO14949 82 aa7.45□□□□□ -1.22
USF1-206ENST00000491629 CXCL5P42830 114 aa7.45□□□□□ -1.22
USF1-206ENST00000491629 ARL17AQ8IVW1 177 aa7.45□□□□□ -1.22
USF1-206ENST00000491629 ACYP1P07311 99 aa7.44□□□□□ -1.22
USF1-206ENST00000491629 FP248Q71RG6 208 aaPredicted RBP7.44□□□□□ -1.22
USF1-206ENST00000491629 FAM19A1Q7Z5A9 133 aa7.44□□□□□ -1.22
USF1-206ENST00000491629 NKAPP1Q8N9T2 125 aa7.44□□□□□ -1.22
USF1-206ENST00000491629 Q8NDZ9 215 aa7.44□□□□□ -1.22
USF1-206ENST00000491629 COX7B2Q8TF08 81 aa7.44□□□□□ -1.22
USF1-206ENST00000491629 C9JAW5 83 aa7.43□□□□□ -1.22
USF1-206ENST00000491629 H3BT86 120 aa7.43□□□□□ -1.22
USF1-206ENST00000491629 M0R378 163 aa7.43□□□□□ -1.22
USF1-206ENST00000491629 KRTAP19-2Q3LHN2 52 aa7.43□□□□□ -1.22
USF1-206ENST00000491629 ORMDL2Q53FV1 153 aa7.43□□□□□ -1.22
USF1-206ENST00000491629 PAPPA-AS1Q5QFB9 102 aa7.43□□□□□ -1.22
USF1-206ENST00000491629 TMEM170BQ5T4T1 132 aa7.43□□□□□ -1.22
USF1-206ENST00000491629 IGLV5-45A0A087WSX0 123 aa7.42□□□□□ -1.22
USF1-206ENST00000491629 TRBV10-2A0A0K0K1G8 114 aa7.42□□□□□ -1.22
USF1-206ENST00000491629 VPREB1P12018 145 aa7.42□□□□□ -1.22
USF1-206ENST00000491629 ATXN8Q156A1 80 aa7.42□□□□□ -1.22
USF1-206ENST00000491629 LINC00337Q8N6G1 96 aa7.42□□□□□ -1.22
USF1-206ENST00000491629 PRO1854Q9UHT4 67 aa7.42□□□□□ -1.22
USF1-206ENST00000491629 A0A0B4J2C4 111 aa7.41□□□□□ -1.22
USF1-206ENST00000491629 A4D1N5 150 aa7.41□□□□□ -1.22
USF1-206ENST00000491629 TIMM17AQ99595 171 aa7.41□□□□□ -1.22
USF1-206ENST00000491629 TINCRA0A1B0GVN0 87 aa7.4□□□□□ -1.22
USF1-206ENST00000491629 C9orf153Q5TBE3 101 aa7.4□□□□□ -1.22
USF1-206ENST00000491629 SPAG11AQ6PDA7 123 aa7.4□□□□□ -1.22
USF1-206ENST00000491629 TOMM6Q96B49 74 aa7.4□□□□□ -1.22
USF1-206ENST00000491629 HERVK_113P61574 105 aa7.39□□□□□ -1.23
USF1-206ENST00000491629 DAND5Q8N907 189 aa7.39□□□□□ -1.23
USF1-206ENST00000491629 SPRR4Q96PI1 79 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms