RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 IGKV2-28A0A075B6P5 120 aa8.49□□□□□ -1.05
CDK9-204ENST00000491521 RPL37AP8A6NKH3 93 aa8.49□□□□□ -1.05
CDK9-204ENST00000491521 IGKV2D-28P01615 120 aa8.49□□□□□ -1.05
CDK9-204ENST00000491521 UBE2BP63146 152 aa8.49□□□□□ -1.05
CDK9-204ENST00000491521 LINC00167Q96N53 147 aa8.49□□□□□ -1.05
CDK9-204ENST00000491521 NHP2Q9NX24 153 aaKnown RBP8.49□□□□□ -1.05
CDK9-204ENST00000491521 TRAV13-2A0A0B4J235 113 aa8.48□□□□□ -1.05
CDK9-204ENST00000491521 CFC1BP0CG36 223 aa8.48□□□□□ -1.05
CDK9-204ENST00000491521 CFC1P0CG37 223 aa8.48□□□□□ -1.05
CDK9-204ENST00000491521 LINC00337Q8N6G1 96 aa8.47□□□□□ -1.05
CDK9-204ENST00000491521 UBR4Q5T4S7 5183 aa8.47□□□□□ -1.05
CDK9-204ENST00000491521 TRBV10-3A0A0K0K1G6 114 aa8.46□□□□□ -1.06
CDK9-204ENST00000491521 TMEM126AQ9H061 195 aa8.46□□□□□ -1.06
CDK9-204ENST00000491521 A0A0B4J2C4 111 aa8.45□□□□□ -1.06
CDK9-204ENST00000491521 H7C2G1 150 aa8.45□□□□□ -1.06
CDK9-204ENST00000491521 RPL13AP40429 203 aaKnown RBP8.45□□□□□ -1.06
CDK9-204ENST00000491521 PRO1854Q9UHT4 67 aa8.45□□□□□ -1.06
CDK9-204ENST00000491521 IGLV1-50A0A075B6I6 118 aa8.44□□□□□ -1.06
CDK9-204ENST00000491521 K7ERJ3 54 aa8.44□□□□□ -1.06
CDK9-204ENST00000491521 IGLV6-57P01721 117 aa8.43□□□□□ -1.06
CDK9-204ENST00000491521 MT1HL1P0DM35 61 aa8.43□□□□□ -1.06
CDK9-204ENST00000491521 Q1RN00 199 aa8.43□□□□□ -1.06
CDK9-204ENST00000491521 CBY1Q9Y3M2 126 aa8.43□□□□□ -1.06
CDK9-204ENST00000491521 TNXBP22105 4242 aa8.42□□□□□ -1.06
CDK9-204ENST00000491521 TRAV23DV6A0A075B6W5 121 aa8.41□□□□□ -1.06
CDK9-204ENST00000491521 A0A1B0GWB2 263 aa8.41□□□□□ -1.06
CDK9-204ENST00000491521 REG3GQ6UW15 175 aa8.4□□□□□ -1.06
CDK9-204ENST00000491521 KRTAP11-1Q8IUC1 163 aa8.4□□□□□ -1.06
CDK9-204ENST00000491521 SNHG12Q9BXW3 62 aa8.4□□□□□ -1.06
CDK9-204ENST00000491521 PRYO14603 147 aa8.39□□□□□ -1.07
CDK9-204ENST00000491521 SMIM11BQ8TCY0 68 aa8.39□□□□□ -1.07
CDK9-204ENST00000491521 KCNQ1DNQ9H478 68 aa8.39□□□□□ -1.07
CDK9-204ENST00000491521 PSORS1C2Q9UIG4 136 aa8.38□□□□□ -1.07
CDK9-204ENST00000491521 ETDCA0A1B0GVM5 59 aa8.37□□□□□ -1.07
CDK9-204ENST00000491521 ZNF73O43830 326 aaPredicted RBP8.37□□□□□ -1.07
CDK9-204ENST00000491521 PSMB2P49721 201 aa8.37□□□□□ -1.07
CDK9-204ENST00000491521 C1orf137Q5JT78 98 aa8.37□□□□□ -1.07
CDK9-204ENST00000491521 DIRC1Q969H9 104 aa8.37□□□□□ -1.07
CDK9-204ENST00000491521 VAMP3Q15836 100 aa8.36□□□□□ -1.07
CDK9-204ENST00000491521 C6orf99Q4VX62 202 aa8.36□□□□□ -1.07
CDK9-204ENST00000491521 SPINK6Q6UWN8 80 aa8.36□□□□□ -1.07
CDK9-204ENST00000491521 FAM19A1Q7Z5A9 133 aa8.36□□□□□ -1.07
CDK9-204ENST00000491521 TSPAN13O95857 204 aa8.35□□□□□ -1.07
CDK9-204ENST00000491521 RPL28P46779 137 aaKnown RBP8.35□□□□□ -1.07
CDK9-204ENST00000491521 COL5A1-AS1Q5SY13 56 aa8.35□□□□□ -1.07
CDK9-204ENST00000491521 LINC01600Q96MT4 127 aa8.35□□□□□ -1.07
CDK9-204ENST00000491521 BCE1O60756 84 aa8.34□□□□□ -1.07
CDK9-204ENST00000491521 UBE2AP49459 152 aa8.34□□□□□ -1.07
CDK9-204ENST00000491521 COX7BP24311 80 aa8.33□□□□□ -1.08
CDK9-204ENST00000491521 NAA38Q9BRA0 125 aaKnown RBP8.33□□□□□ -1.08
CDK9-204ENST00000491521 COX6CP09669 75 aa8.32□□□□□ -1.08
CDK9-204ENST00000491521 SCGB1C2P0DMR2 95 aa8.32□□□□□ -1.08
CDK9-204ENST00000491521 SPRR1AP35321 89 aa8.32□□□□□ -1.08
CDK9-204ENST00000491521 B5MCH6 92 aa8.31□□□□□ -1.08
CDK9-204ENST00000491521 TAX1BP3O14907 124 aa8.31□□□□□ -1.08
CDK9-204ENST00000491521 LRP2P98164 4655 aa8.3□□□□□ -1.08
CDK9-204ENST00000491521 TRBV7-6A0A0J9YX20 115 aa8.3□□□□□ -1.08
CDK9-204ENST00000491521 KRTAP4-16G5E9R7 235 aaPredicted RBP8.3□□□□□ -1.08
CDK9-204ENST00000491521 H3BUT2 72 aa8.3□□□□□ -1.08
CDK9-204ENST00000491521 TRIAP1O43715 76 aa8.3□□□□□ -1.08
CDK9-204ENST00000491521 IGLV7-43P04211 117 aa8.3□□□□□ -1.08
CDK9-204ENST00000491521 PRLHP81277 87 aa8.3□□□□□ -1.08
CDK9-204ENST00000491521 C9orf118A6NHY6 69 aa8.29□□□□□ -1.08
CDK9-204ENST00000491521 H0YGX0 51 aa8.28□□□□□ -1.08
CDK9-204ENST00000491521 ELOF1P60002 83 aaKnown RBP8.28□□□□□ -1.08
CDK9-204ENST00000491521 Q6ZRX8 168 aa8.28□□□□□ -1.08
CDK9-204ENST00000491521 HIGD2AQ9BW72 106 aa8.28□□□□□ -1.08
CDK9-204ENST00000491521 SLC25A20O43772 301 aa8.27□□□□□ -1.09
CDK9-204ENST00000491521 H0Y9J4 135 aa8.26□□□□□ -1.09
CDK9-204ENST00000491521 ZNF861PO60384 105 aa8.26□□□□□ -1.09
CDK9-204ENST00000491521 SNCGO76070 127 aa8.26□□□□□ -1.09
CDK9-204ENST00000491521 KRTAP10-8P60410 259 aa8.26□□□□□ -1.09
CDK9-204ENST00000491521 DHRS4-AS1Q9P1J3 65 aa8.26□□□□□ -1.09
CDK9-204ENST00000491521 SMCR5Q8TEV8 140 aa8.25□□□□□ -1.09
CDK9-204ENST00000491521 CLEC2BQ92478 149 aa8.25□□□□□ -1.09
CDK9-204ENST00000491521 LYRM7Q5U5X0 104 aa8.24□□□□□ -1.09
CDK9-204ENST00000491521 LINC00575Q6W349 94 aa8.24□□□□□ -1.09
CDK9-204ENST00000491521 Q9BRP9 147 aa8.24□□□□□ -1.09
CDK9-204ENST00000491521 A0A1W2PPM0 123 aa8.23□□□□□ -1.09
CDK9-204ENST00000491521 hADV29S1A0JD25 119 aa8.23□□□□□ -1.09
CDK9-204ENST00000491521 FABP2P12104 132 aa8.23□□□□□ -1.09
CDK9-204ENST00000491521 KRTAP13-1Q8IUC0 172 aa8.23□□□□□ -1.09
CDK9-204ENST00000491521 RNF213Q63HN8 5207 aa8.23□□□□□ -1.09
CDK9-204ENST00000491521 ERC2-IT1O76042 136 aa8.21□□□□□ -1.1
CDK9-204ENST00000491521 FAM218AQ96MZ4 157 aa8.21□□□□□ -1.1
CDK9-204ENST00000491521 PRR26Q8N8Z3 221 aa8.2□□□□□ -1.1
CDK9-204ENST00000491521 TCL1BO95988 128 aa8.19□□□□□ -1.1
CDK9-204ENST00000491521 ATXN8Q156A1 80 aa8.19□□□□□ -1.1
CDK9-204ENST00000491521 DEFB105AQ8NG35 78 aa8.19□□□□□ -1.1
CDK9-204ENST00000491521 TRBV20-1A0A075B6N2 111 aa8.18□□□□□ -1.1
CDK9-204ENST00000491521 A0A1B0GX51 115 aa8.18□□□□□ -1.1
CDK9-204ENST00000491521 DNAL4O96015 105 aa8.18□□□□□ -1.1
CDK9-204ENST00000491521 ST20-AS1Q8NBB2 130 aa8.18□□□□□ -1.1
CDK9-204ENST00000491521 LST1O00453 97 aa8.17□□□□□ -1.1
CDK9-204ENST00000491521 SPCS1Q9Y6A9 102 aa8.17□□□□□ -1.1
CDK9-204ENST00000491521 Q6ZQY7 126 aa8.16□□□□□ -1.1
CDK9-204ENST00000491521 ZNF706Q9Y5V0 76 aaPredicted RBP8.16□□□□□ -1.1
CDK9-204ENST00000491521 TRACP01848 142 aa8.15□□□□□ -1.1
CDK9-204ENST00000491521 GAGE2AQ6NT46 116 aa8.15□□□□□ -1.1
CDK9-204ENST00000491521 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms