RNA–Protein interactions for RNA: ENST00000489160.1

CCL20-204, Transcript of C-C motif chemokine ligand 20, humanhuman

TSL 3

Gene CCL20, Length 673 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20-204ENST00000489160 APC2O95996 2303 aa2.07□□□□□ -2.08
CCL20-204ENST00000489160 UBR4Q5T4S7 5183 aa2.07□□□□□ -2.08
CCL20-204ENST00000489160 D6R8Y8 96 aa2.07□□□□□ -2.08
CCL20-204ENST00000489160 H3BVH4 76 aa2.07□□□□□ -2.08
CCL20-204ENST00000489160 M0R2N4 97 aa2.07□□□□□ -2.08
CCL20-204ENST00000489160 LEPROTL1O95214 131 aa2.07□□□□□ -2.08
CCL20-204ENST00000489160 IGHV3-30P01768 117 aa2.07□□□□□ -2.08
CCL20-204ENST00000489160 IGHV3-30-5P0DP03 117 aa2.07□□□□□ -2.08
CCL20-204ENST00000489160 KRTAP12-4P60329 112 aa2.07□□□□□ -2.08
CCL20-204ENST00000489160 ATXN8Q156A1 80 aa2.07□□□□□ -2.08
CCL20-204ENST00000489160 FAM74A4Q5TZK3 123 aa2.07□□□□□ -2.08
CCL20-204ENST00000489160 GDF5OSQ5U4N7 250 aa2.07□□□□□ -2.08
CCL20-204ENST00000489160 MUSTN1Q8IVN3 82 aa2.07□□□□□ -2.08
CCL20-204ENST00000489160 DOCK10Q96BY6 2186 aa2.07□□□□□ -2.08
CCL20-204ENST00000489160 BAZ2BQ9UIF8 2168 aaKnown RBP2.07□□□□□ -2.08
CCL20-204ENST00000489160 CRYBG3Q68DQ2 2970 aa2.07□□□□□ -2.08
CCL20-204ENST00000489160 DOCK11Q5JSL3 2073 aa2.06□□□□□ -2.08
CCL20-204ENST00000489160 MED13LQ71F56 2210 aa2.06□□□□□ -2.08
CCL20-204ENST00000489160 ACACAQ13085 2346 aa2.06□□□□□ -2.08
CCL20-204ENST00000489160 IGKV3-7A0A075B6H7 116 aa2.06□□□□□ -2.08
CCL20-204ENST00000489160 PPP1R17O96001 155 aa2.06□□□□□ -2.08
CCL20-204ENST00000489160 SPAG11BQ08648 103 aa2.06□□□□□ -2.08
CCL20-204ENST00000489160 SPAG11AQ6PDA7 123 aa2.06□□□□□ -2.08
CCL20-204ENST00000489160 UNQ6190/PRO20217Q6UXQ8 127 aa2.06□□□□□ -2.08
CCL20-204ENST00000489160 FAM103A1Q9BTL3 118 aaKnown RBP2.06□□□□□ -2.08
CCL20-204ENST00000489160 FREM1Q5H8C1 2179 aa2.06□□□□□ -2.08
CCL20-204ENST00000489160 TNRC6BQ9UPQ9 1833 aaKnown RBP2.05□□□□□ -2.08
CCL20-204ENST00000489160 ASXL3Q9C0F0 2248 aa2.05□□□□□ -2.08
CCL20-204ENST00000489160 LRRK2Q5S007 2527 aa2.05□□□□□ -2.08
CCL20-204ENST00000489160 LOC110117498A0A087WWA1 95 aa2.05□□□□□ -2.08
CCL20-204ENST00000489160 CLPSL1A2RUU4 121 aa2.05□□□□□ -2.08
CCL20-204ENST00000489160 PCOTHQ58A44 107 aa2.05□□□□□ -2.08
CCL20-204ENST00000489160 PPP1R1CQ8WVI7 109 aa2.05□□□□□ -2.08
CCL20-204ENST00000489160 CUBNO60494 3623 aa2.04□□□□□ -2.08
CCL20-204ENST00000489160 PDE6GP18545 87 aa2.04□□□□□ -2.08
CCL20-204ENST00000489160 SPINT3P49223 89 aa2.04□□□□□ -2.08
CCL20-204ENST00000489160 ALPK2Q86TB3 2170 aa2.04□□□□□ -2.08
CCL20-204ENST00000489160 ASCC3Q8N3C0 2202 aaKnown RBP2.04□□□□□ -2.08
CCL20-204ENST00000489160 MYOFQ9NZM1 2061 aa2.04□□□□□ -2.08
CCL20-204ENST00000489160 R4GMQ9 66 aa2.04□□□□□ -2.08
CCL20-204ENST00000489160 CELSR2Q9HCU4 2923 aa2.04□□□□□ -2.08
CCL20-204ENST00000489160 USP9YO00507 2555 aaPredicted RBP2.04□□□□□ -2.08
CCL20-204ENST00000489160 JMJD1CQ15652 2540 aa2.03□□□□□ -2.08
CCL20-204ENST00000489160 SDK1Q7Z5N4 2213 aa2.03□□□□□ -2.08
CCL20-204ENST00000489160 CCL3L1P16619 93 aa2.03□□□□□ -2.08
CCL20-204ENST00000489160 TOMM5Q8N4H5 51 aa2.03□□□□□ -2.08
CCL20-204ENST00000489160 COX7B2Q8TF08 81 aa2.03□□□□□ -2.08
CCL20-204ENST00000489160 PRR15LQ9BU68 103 aa2.03□□□□□ -2.08
CCL20-204ENST00000489160 PROK2Q9HC23 129 aa2.03□□□□□ -2.08
CCL20-204ENST00000489160 HIVEP1P15822 2718 aa2.03□□□□□ -2.09
CCL20-204ENST00000489160 CACNA1EQ15878 2313 aa2.02□□□□□ -2.09
CCL20-204ENST00000489160 NINQ8N4C6 2090 aa2.02□□□□□ -2.09
CCL20-204ENST00000489160 CEP192Q8TEP8 1941 aa2.02□□□□□ -2.09
CCL20-204ENST00000489160 TRBV7-4A0A0J9YYF1 115 aa2.02□□□□□ -2.09
CCL20-204ENST00000489160 IGKV2-29A2NJV5 120 aaPredicted RBP2.02□□□□□ -2.09
CCL20-204ENST00000489160 C10orf142B7Z368 130 aa2.02□□□□□ -2.09
CCL20-204ENST00000489160 F8VRH5 84 aa2.02□□□□□ -2.09
CCL20-204ENST00000489160 IGLV3-1P01715 115 aa2.02□□□□□ -2.09
CCL20-204ENST00000489160 HIVEP3Q5T1R4 2406 aa2.02□□□□□ -2.09
CCL20-204ENST00000489160 HEATR1Q9H583 2144 aaKnown RBP2.02□□□□□ -2.09
CCL20-204ENST00000489160 CCDC168Q8NDH2 2452 aa2.01□□□□□ -2.09
CCL20-204ENST00000489160 URB1O60287 2271 aaKnown RBP2.01□□□□□ -2.09
CCL20-204ENST00000489160 CENPEQ02224 2701 aa2.01□□□□□ -2.09
CCL20-204ENST00000489160 NDUFB1O75438 58 aa2.01□□□□□ -2.09
CCL20-204ENST00000489160 CCL18P55774 89 aa2.01□□□□□ -2.09
CCL20-204ENST00000489160 KRTAP12-1P59990 96 aa2.01□□□□□ -2.09
CCL20-204ENST00000489160 RPL37AP61513 92 aaKnown RBP2.01□□□□□ -2.09
CCL20-204ENST00000489160 ZGRF1Q86YA3 2104 aa2.01□□□□□ -2.09
CCL20-204ENST00000489160 OBSCN-AS1Q96MR7 158 aa2.01□□□□□ -2.09
CCL20-204ENST00000489160 LINC01558Q9Y6Z2 57 aa2.01□□□□□ -2.09
CCL20-204ENST00000489160 SPTBN1Q01082 2364 aaKnown RBP2.01□□□□□ -2.09
CCL20-204ENST00000489160 MED13Q9UHV7 2174 aa2□□□□□ -2.09
CCL20-204ENST00000489160 NBEAL1Q6ZS30 2694 aa2□□□□□ -2.09
CCL20-204ENST00000489160 ATRQ13535 2644 aa2□□□□□ -2.09
CCL20-204ENST00000489160 BIRC6Q9NR09 4857 aa2□□□□□ -2.09
CCL20-204ENST00000489160 A0A1B0GUT8 65 aa2□□□□□ -2.09
CCL20-204ENST00000489160 UQCR11O14957 56 aa2□□□□□ -2.09
CCL20-204ENST00000489160 MGPP08493 103 aa2□□□□□ -2.09
CCL20-204ENST00000489160 DEFB107AQ8IZN7 70 aa2□□□□□ -2.09
CCL20-204ENST00000489160 DEFB124Q8NES8 71 aa2□□□□□ -2.09
CCL20-204ENST00000489160 LINC00846Q9NV44 126 aa2□□□□□ -2.09
CCL20-204ENST00000489160 PCDH15Q96QU1 1955 aa1.99□□□□□ -2.09
CCL20-204ENST00000489160 MTORP42345 2549 aa1.99□□□□□ -2.09
CCL20-204ENST00000489160 ZNF469Q96JG9 3925 aaPredicted RBP1.99□□□□□ -2.09
CCL20-204ENST00000489160 HMGA1P17096 107 aaKnown RBP1.99□□□□□ -2.09
CCL20-204ENST00000489160 NMES1Q9C002 83 aa1.99□□□□□ -2.09
CCL20-204ENST00000489160 V9GYV3 84 aa1.99□□□□□ -2.09
CCL20-204ENST00000489160 AHCTF1Q8WYP5 2266 aa1.99□□□□□ -2.09
CCL20-204ENST00000489160 COL6A5A8TX70 2615 aa1.99□□□□□ -2.09
CCL20-204ENST00000489160 PI4KAP42356 2102 aa1.99□□□□□ -2.09
CCL20-204ENST00000489160 NBEAL2Q6ZNJ1 2754 aa1.98□□□□□ -2.09
CCL20-204ENST00000489160 ANKHD1Q8IWZ3 2542 aaKnown RBP1.98□□□□□ -2.09
CCL20-204ENST00000489160 APCP25054 2843 aa1.98□□□□□ -2.09
CCL20-204ENST00000489160 TRBV30A0A0K0K1B3 111 aa1.98□□□□□ -2.09
CCL20-204ENST00000489160 LINC01549A6NIU2 74 aa1.98□□□□□ -2.09
CCL20-204ENST00000489160 DEFB119Q8N690 84 aa1.98□□□□□ -2.09
CCL20-204ENST00000489160 NOTCH1P46531 2555 aa1.98□□□□□ -2.09
CCL20-204ENST00000489160 NIPBLQ6KC79 2804 aaeCLIP1.97□□□□□ -2.09
CCL20-204ENST00000489160 FLNAP21333 2647 aaKnown RBP1.97□□□□□ -2.09
CCL20-204ENST00000489160 RYR3Q15413 4870 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms