RNA–Protein interactions for RNA: ENST00000488758.1

APOBEC3A-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 2

Gene APOBEC3A, Length 344 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-203ENST00000488758 C9orf118A6NHY6 69 aa4.8□□□□□ -1.64
APOBEC3A-203ENST00000488758 H3BUT2 72 aa4.8□□□□□ -1.64
APOBEC3A-203ENST00000488758 TSPAN13O95857 204 aa4.8□□□□□ -1.64
APOBEC3A-203ENST00000488758 SCGB1C2P0DMR2 95 aa4.8□□□□□ -1.64
APOBEC3A-203ENST00000488758 MRPL55Q7Z7F7 128 aaKnown RBP4.8□□□□□ -1.64
APOBEC3A-203ENST00000488758 SPACA4Q8TDM5 124 aa4.8□□□□□ -1.64
APOBEC3A-203ENST00000488758 HECTD4Q9Y4D8 3996 aa4.8□□□□□ -1.64
APOBEC3A-203ENST00000488758 RYR1P21817 5038 aa4.79□□□□□ -1.64
APOBEC3A-203ENST00000488758 TRBV10-3A0A0K0K1G6 114 aa4.79□□□□□ -1.64
APOBEC3A-203ENST00000488758 M0QXV9 152 aa4.79□□□□□ -1.64
APOBEC3A-203ENST00000488758 IGLV6-57P01721 117 aa4.79□□□□□ -1.64
APOBEC3A-203ENST00000488758 COX6CP09669 75 aa4.79□□□□□ -1.64
APOBEC3A-203ENST00000488758 SMIM11BQ8TCY0 68 aa4.79□□□□□ -1.64
APOBEC3A-203ENST00000488758 C7orf33Q8WU49 177 aa4.79□□□□□ -1.64
APOBEC3A-203ENST00000488758 LINC00167Q96N53 147 aa4.79□□□□□ -1.64
APOBEC3A-203ENST00000488758 NAA38Q9BRA0 125 aaKnown RBP4.79□□□□□ -1.64
APOBEC3A-203ENST00000488758 KIAA1109Q2LD37 5005 aa4.79□□□□□ -1.64
APOBEC3A-203ENST00000488758 A0A087WYN8 130 aa4.78□□□□□ -1.64
APOBEC3A-203ENST00000488758 PANO1I0J062 215 aa4.78□□□□□ -1.64
APOBEC3A-203ENST00000488758 RPL28P46779 137 aaKnown RBP4.78□□□□□ -1.64
APOBEC3A-203ENST00000488758 LCE5AQ5TCM9 118 aa4.78□□□□□ -1.64
APOBEC3A-203ENST00000488758 KRTAP7-1Q8IUC3 87 aa4.78□□□□□ -1.64
APOBEC3A-203ENST00000488758 TRAV23DV6A0A075B6W5 121 aa4.77□□□□□ -1.65
APOBEC3A-203ENST00000488758 A0A1B0GVY2 172 aa4.77□□□□□ -1.65
APOBEC3A-203ENST00000488758 A0A1W2PPM0 123 aa4.77□□□□□ -1.65
APOBEC3A-203ENST00000488758 RPL37AP8A6NKH3 93 aa4.77□□□□□ -1.65
APOBEC3A-203ENST00000488758 FABP2P12104 132 aa4.77□□□□□ -1.65
APOBEC3A-203ENST00000488758 KRTAP10-1P60331 282 aa4.77□□□□□ -1.65
APOBEC3A-203ENST00000488758 UBE2BP63146 152 aa4.77□□□□□ -1.65
APOBEC3A-203ENST00000488758 VAMP3Q15836 100 aa4.77□□□□□ -1.65
APOBEC3A-203ENST00000488758 LYRM7Q5U5X0 104 aa4.77□□□□□ -1.65
APOBEC3A-203ENST00000488758 PHF5AQ7RTV0 110 aaKnown RBP4.77□□□□□ -1.65
APOBEC3A-203ENST00000488758 IGLV1-50A0A075B6I6 118 aa4.76□□□□□ -1.65
APOBEC3A-203ENST00000488758 TRIAP1O43715 76 aa4.76□□□□□ -1.65
APOBEC3A-203ENST00000488758 C6orf99Q4VX62 202 aa4.76□□□□□ -1.65
APOBEC3A-203ENST00000488758 DIRC1Q969H9 104 aa4.76□□□□□ -1.65
APOBEC3A-203ENST00000488758 KCNQ1DNQ9H478 68 aa4.76□□□□□ -1.65
APOBEC3A-203ENST00000488758 PLAC8Q9NZF1 115 aa4.76□□□□□ -1.65
APOBEC3A-203ENST00000488758 FAM30AQ9NZY2 134 aa4.76□□□□□ -1.65
APOBEC3A-203ENST00000488758 EPM2AB3EWF7 344 aa4.75□□□□□ -1.65
APOBEC3A-203ENST00000488758 H0YGX0 51 aa4.75□□□□□ -1.65
APOBEC3A-203ENST00000488758 PRYO14603 147 aa4.75□□□□□ -1.65
APOBEC3A-203ENST00000488758 ZNF73O43830 326 aaPredicted RBP4.75□□□□□ -1.65
APOBEC3A-203ENST00000488758 KRTAP4-11Q9BYQ6 195 aa4.75□□□□□ -1.65
APOBEC3A-203ENST00000488758 A0A1B0GV90 55 aa4.74□□□□□ -1.65
APOBEC3A-203ENST00000488758 COX7BP24311 80 aa4.74□□□□□ -1.65
APOBEC3A-203ENST00000488758 REG3GQ6UW15 175 aa4.74□□□□□ -1.65
APOBEC3A-203ENST00000488758 Q6ZSA8 131 aa4.74□□□□□ -1.65
APOBEC3A-203ENST00000488758 CIRBP-AS1Q8TBR5 109 aa4.74□□□□□ -1.65
APOBEC3A-203ENST00000488758 KRTAP4-2Q9BYR5 136 aa4.74□□□□□ -1.65
APOBEC3A-203ENST00000488758 SPCS1Q9Y6A9 102 aa4.74□□□□□ -1.65
APOBEC3A-203ENST00000488758 DNAH11Q96DT5 4516 aa4.73□□□□□ -1.65
APOBEC3A-203ENST00000488758 TRBV20-1A0A075B6N2 111 aa4.73□□□□□ -1.65
APOBEC3A-203ENST00000488758 ETDCA0A1B0GVM5 59 aa4.73□□□□□ -1.65
APOBEC3A-203ENST00000488758 SLC25A20O43772 301 aa4.73□□□□□ -1.65
APOBEC3A-203ENST00000488758 SNCGO76070 127 aa4.73□□□□□ -1.65
APOBEC3A-203ENST00000488758 GTF2H5Q6ZYL4 71 aa4.73□□□□□ -1.65
APOBEC3A-203ENST00000488758 FAT2Q9NYQ8 4349 aa4.73□□□□□ -1.65
APOBEC3A-203ENST00000488758 ABCA13Q86UQ4 5058 aa4.73□□□□□ -1.65
APOBEC3A-203ENST00000488758 PKD1P98161 4303 aa4.73□□□□□ -1.65
APOBEC3A-203ENST00000488758 TRBV7-6A0A0J9YX20 115 aa4.72□□□□□ -1.65
APOBEC3A-203ENST00000488758 ATXN8Q156A1 80 aa4.72□□□□□ -1.65
APOBEC3A-203ENST00000488758 SCXQ7RTU7 201 aa4.72□□□□□ -1.65
APOBEC3A-203ENST00000488758 CLEC2BQ92478 149 aa4.72□□□□□ -1.65
APOBEC3A-203ENST00000488758 KRTAP4-5Q9BYR2 181 aa4.72□□□□□ -1.65
APOBEC3A-203ENST00000488758 K7EP34 96 aa4.71□□□□□ -1.66
APOBEC3A-203ENST00000488758 TCL1BO95988 128 aa4.71□□□□□ -1.66
APOBEC3A-203ENST00000488758 SPRR1AP35321 89 aa4.71□□□□□ -1.66
APOBEC3A-203ENST00000488758 ELOF1P60002 83 aaKnown RBP4.71□□□□□ -1.66
APOBEC3A-203ENST00000488758 A0A1B0GX51 115 aa4.7□□□□□ -1.66
APOBEC3A-203ENST00000488758 hADV29S1A0JD25 119 aa4.7□□□□□ -1.66
APOBEC3A-203ENST00000488758 B5MCH6 92 aa4.7□□□□□ -1.66
APOBEC3A-203ENST00000488758 DNAL4O96015 105 aa4.7□□□□□ -1.66
APOBEC3A-203ENST00000488758 INAFM2P0DMQ5 153 aa4.7□□□□□ -1.66
APOBEC3A-203ENST00000488758 UBE2AP49459 152 aa4.7□□□□□ -1.66
APOBEC3A-203ENST00000488758 HAMPP81172 84 aa4.7□□□□□ -1.66
APOBEC3A-203ENST00000488758 LINC00575Q6W349 94 aa4.7□□□□□ -1.66
APOBEC3A-203ENST00000488758 FAM19A1Q7Z5A9 133 aa4.7□□□□□ -1.66
APOBEC3A-203ENST00000488758 KRTAP11-1Q8IUC1 163 aa4.7□□□□□ -1.66
APOBEC3A-203ENST00000488758 KRTAP3-1Q9BYR8 98 aa4.7□□□□□ -1.66
APOBEC3A-203ENST00000488758 KRTAP4-16G5E9R7 235 aaPredicted RBP4.69□□□□□ -1.66
APOBEC3A-203ENST00000488758 H3BMG7 143 aa4.69□□□□□ -1.66
APOBEC3A-203ENST00000488758 LST1O00453 97 aa4.69□□□□□ -1.66
APOBEC3A-203ENST00000488758 BCE1O60756 84 aa4.69□□□□□ -1.66
APOBEC3A-203ENST00000488758 FAM218AQ96MZ4 157 aa4.69□□□□□ -1.66
APOBEC3A-203ENST00000488758 PSORS1C2Q9UIG4 136 aa4.69□□□□□ -1.66
APOBEC3A-203ENST00000488758 DNAH5Q8TE73 4624 aa4.69□□□□□ -1.66
APOBEC3A-203ENST00000488758 TRACP01848 142 aa4.68□□□□□ -1.66
APOBEC3A-203ENST00000488758 UBE2V1Q13404 147 aa4.68□□□□□ -1.66
APOBEC3A-203ENST00000488758 C1orf137Q5JT78 98 aa4.68□□□□□ -1.66
APOBEC3A-203ENST00000488758 Q6ZRX8 168 aa4.68□□□□□ -1.66
APOBEC3A-203ENST00000488758 DHRS4-AS1Q9P1J3 65 aa4.68□□□□□ -1.66
APOBEC3A-203ENST00000488758 C9JAW5 83 aa4.67□□□□□ -1.66
APOBEC3A-203ENST00000488758 H0Y9J4 135 aa4.67□□□□□ -1.66
APOBEC3A-203ENST00000488758 XGP55808 180 aa4.67□□□□□ -1.66
APOBEC3A-203ENST00000488758 PRLHP81277 87 aa4.67□□□□□ -1.66
APOBEC3A-203ENST00000488758 DNAH8Q96JB1 4490 aa4.66□□□□□ -1.66
APOBEC3A-203ENST00000488758 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.66□□□□□ -1.66
APOBEC3A-203ENST00000488758 SMCR5Q8TEV8 140 aa4.66□□□□□ -1.66
APOBEC3A-203ENST00000488758 HIGD2AQ9BW72 106 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms