RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 DEFB1P60022 68 aa-1.1□□□□□ -2.59
CCDC66-221ENST00000487739 MTORP42345 2549 aa-1.1□□□□□ -2.59
CCDC66-221ENST00000487739 MAPKBP1O60336 1514 aa-1.1□□□□□ -2.59
CCDC66-221ENST00000487739 MAP3K1Q13233 1512 aa-1.1□□□□□ -2.59
CCDC66-221ENST00000487739 SACSQ9NZJ4 4579 aa-1.1□□□□□ -2.59
CCDC66-221ENST00000487739 PLECQ15149 4684 aaKnown RBP-1.1□□□□□ -2.59
CCDC66-221ENST00000487739 TMEM262E9PQX1 116 aa-1.11□□□□□ -2.59
CCDC66-221ENST00000487739 H3BQ15 152 aa-1.11□□□□□ -2.59
CCDC66-221ENST00000487739 KRTDAPP60985 99 aa-1.11□□□□□ -2.59
CCDC66-221ENST00000487739 KRTAP19-5Q3LI72 72 aa-1.11□□□□□ -2.59
CCDC66-221ENST00000487739 VAMP8Q9BV40 100 aa-1.11□□□□□ -2.59
CCDC66-221ENST00000487739 LRRK2Q5S007 2527 aa-1.11□□□□□ -2.59
CCDC66-221ENST00000487739 QSER1Q2KHR3 1735 aa-1.12□□□□□ -2.59
CCDC66-221ENST00000487739 PREX1Q8TCU6 1659 aa-1.12□□□□□ -2.59
CCDC66-221ENST00000487739 CGREF1Q99674 301 aa-1.12□□□□□ -2.59
CCDC66-221ENST00000487739 DNHD1Q96M86 4753 aa-1.12□□□□□ -2.59
CCDC66-221ENST00000487739 SRCAPQ6ZRS2 3230 aa-1.12□□□□□ -2.59
CCDC66-221ENST00000487739 RGPD3A6NKT7 1758 aaPredicted RBP-1.13□□□□□ -2.59
CCDC66-221ENST00000487739 RGPD4Q7Z3J3 1758 aa-1.13□□□□□ -2.59
CCDC66-221ENST00000487739 ACACBO00763 2458 aa-1.13□□□□□ -2.59
CCDC66-221ENST00000487739 PSENENQ9NZ42 101 aa-1.13□□□□□ -2.59
CCDC66-221ENST00000487739 RANBP2P49792 3224 aaKnown RBP-1.13□□□□□ -2.59
CCDC66-221ENST00000487739 DSPP15924 2871 aaKnown RBP-1.13□□□□□ -2.59
CCDC66-221ENST00000487739 C5orf42Q9H799 3197 aa-1.14□□□□□ -2.59
CCDC66-221ENST00000487739 PKD1L3Q7Z443 1732 aa-1.14□□□□□ -2.59
CCDC66-221ENST00000487739 RIF1Q5UIP0 2472 aaKnown RBP-1.14□□□□□ -2.59
CCDC66-221ENST00000487739 USP9XQ93008 2570 aaPredicted RBP-1.14□□□□□ -2.59
CCDC66-221ENST00000487739 EFCAB10A6NFE3 127 aa-1.14□□□□□ -2.59
CCDC66-221ENST00000487739 K7EP34 96 aa-1.14□□□□□ -2.59
CCDC66-221ENST00000487739 NMSQ5H8A3 153 aa-1.14□□□□□ -2.59
CCDC66-221ENST00000487739 GNG8Q9UK08 70 aa-1.14□□□□□ -2.59
CCDC66-221ENST00000487739 CRYBG1Q9Y4K1 1723 aa-1.15□□□□□ -2.59
CCDC66-221ENST00000487739 FRYQ5TBA9 3013 aa-1.15□□□□□ -2.59
CCDC66-221ENST00000487739 TNRC6CQ9HCJ0 1690 aaKnown RBP-1.15□□□□□ -2.59
CCDC66-221ENST00000487739 SAMD9Q5K651 1589 aa-1.15□□□□□ -2.59
CCDC66-221ENST00000487739 IGLC2P0DOY2 106 aa-1.15□□□□□ -2.59
CCDC66-221ENST00000487739 IGLC3P0DOY3 106 aa-1.15□□□□□ -2.59
CCDC66-221ENST00000487739 MT1XP80297 61 aa-1.15□□□□□ -2.59
CCDC66-221ENST00000487739 PSMG4Q5JS54 123 aa-1.15□□□□□ -2.59
CCDC66-221ENST00000487739 CACFD1Q9UGQ2 172 aa-1.15□□□□□ -2.59
CCDC66-221ENST00000487739 ABCC5O15440 1437 aa-1.15□□□□□ -2.59
CCDC66-221ENST00000487739 SPENQ96T58 3664 aaKnown RBP-1.16□□□□□ -2.59
CCDC66-221ENST00000487739 FAM186AA6NE01 2351 aa-1.16□□□□□ -2.6
CCDC66-221ENST00000487739 H7BZZ5 65 aa-1.16□□□□□ -2.6
CCDC66-221ENST00000487739 AP4S1Q9Y587 144 aa-1.16□□□□□ -2.6
CCDC66-221ENST00000487739 DNAH7Q8WXX0 4024 aa-1.16□□□□□ -2.6
CCDC66-221ENST00000487739 RGPD8O14715 1765 aaPredicted RBP-1.16□□□□□ -2.6
CCDC66-221ENST00000487739 RGPD5Q99666 1765 aa-1.16□□□□□ -2.6
CCDC66-221ENST00000487739 MAGI2Q86UL8 1455 aa-1.17□□□□□ -2.6
CCDC66-221ENST00000487739 TRBV25-1A0A075B6N4 114 aa-1.17□□□□□ -2.6
CCDC66-221ENST00000487739 PRLHP81277 87 aa-1.17□□□□□ -2.6
CCDC66-221ENST00000487739 PMCHL1Q16048 86 aa-1.17□□□□□ -2.6
CCDC66-221ENST00000487739 CHD7Q9P2D1 2997 aa-1.17□□□□□ -2.6
CCDC66-221ENST00000487739 CELSR3Q9NYQ7 3312 aa-1.17□□□□□ -2.6
CCDC66-221ENST00000487739 FAM135AQ9P2D6 1515 aa-1.18□□□□□ -2.6
CCDC66-221ENST00000487739 TMEM218A2RU14 115 aa-1.18□□□□□ -2.6
CCDC66-221ENST00000487739 GTF2H5Q6ZYL4 71 aa-1.18□□□□□ -2.6
CCDC66-221ENST00000487739 UBE2D4Q9Y2X8 147 aa-1.18□□□□□ -2.6
CCDC66-221ENST00000487739 RGPD1P0DJD0 1748 aa-1.18□□□□□ -2.6
CCDC66-221ENST00000487739 MLH3Q9UHC1 1453 aa-1.18□□□□□ -2.6
CCDC66-221ENST00000487739 DNAH8Q96JB1 4490 aa-1.19□□□□□ -2.6
CCDC66-221ENST00000487739 MYH4Q9Y623 1939 aa-1.19□□□□□ -2.6
CCDC66-221ENST00000487739 COX7BP24311 80 aa-1.19□□□□□ -2.6
CCDC66-221ENST00000487739 COX6B2Q6YFQ2 88 aa-1.19□□□□□ -2.6
CCDC66-221ENST00000487739 TIAM2Q8IVF5 1701 aa-1.19□□□□□ -2.6
CCDC66-221ENST00000487739 TMEM203Q969S6 136 aa-1.19□□□□□ -2.6
CCDC66-221ENST00000487739 C2orf88Q9BSF0 95 aa-1.19□□□□□ -2.6
CCDC66-221ENST00000487739 USP32Q8NFA0 1604 aa-1.19□□□□□ -2.6
CCDC66-221ENST00000487739 LINC00587B1AMM8 73 aa-1.2□□□□□ -2.6
CCDC66-221ENST00000487739 LINC00158P58513 81 aa-1.2□□□□□ -2.6
CCDC66-221ENST00000487739 PRO3102Q9H379 93 aa-1.2□□□□□ -2.6
CCDC66-221ENST00000487739 BPTFQ12830 3046 aa-1.2□□□□□ -2.6
CCDC66-221ENST00000487739 NRXN1Q9ULB1 1477 aa-1.2□□□□□ -2.6
CCDC66-221ENST00000487739 DYNC1H1Q14204 4646 aaKnown RBP-1.2□□□□□ -2.6
CCDC66-221ENST00000487739 PLXNC1O60486 1568 aa-1.21□□□□□ -2.6
CCDC66-221ENST00000487739 ANKRD36CQ5JPF3 1778 aa-1.21□□□□□ -2.6
CCDC66-221ENST00000487739 ITPR1Q14643 2758 aa-1.21□□□□□ -2.6
CCDC66-221ENST00000487739 D6R8Y8 96 aa-1.21□□□□□ -2.6
CCDC66-221ENST00000487739 GNGT2O14610 69 aa-1.21□□□□□ -2.6
CCDC66-221ENST00000487739 LEPROTL1O95214 131 aa-1.21□□□□□ -2.6
CCDC66-221ENST00000487739 SMR3BP02814 79 aaPredicted RBP-1.21□□□□□ -2.6
CCDC66-221ENST00000487739 UQCRHP07919 91 aa-1.21□□□□□ -2.6
CCDC66-221ENST00000487739 MRPS10P82664 201 aaKnown RBP-1.21□□□□□ -2.6
CCDC66-221ENST00000487739 MUSTN1Q8IVN3 82 aa-1.21□□□□□ -2.6
CCDC66-221ENST00000487739 TRGV9Q99603 122 aa-1.21□□□□□ -2.6
CCDC66-221ENST00000487739 SUPT6HQ7KZ85 1726 aaKnown RBP-1.21□□□□□ -2.6
CCDC66-221ENST00000487739 LRRC9Q6ZRR7 1453 aa-1.22□□□□□ -2.6
CCDC66-221ENST00000487739 NDUFC1O43677 76 aa-1.22□□□□□ -2.6
CCDC66-221ENST00000487739 LRRC7Q96NW7 1537 aa-1.22□□□□□ -2.6
CCDC66-221ENST00000487739 SPTBN5Q9NRC6 3674 aaKnown RBP-1.22□□□□□ -2.61
CCDC66-221ENST00000487739 POLR1AO95602 1720 aaPredicted RBP-1.23□□□□□ -2.61
CCDC66-221ENST00000487739 F8WEM9 126 aa-1.23□□□□□ -2.61
CCDC66-221ENST00000487739 C3orf79P0CE67 100 aa-1.23□□□□□ -2.61
CCDC66-221ENST00000487739 DEFB106AQ8N104 65 aa-1.23□□□□□ -2.61
CCDC66-221ENST00000487739 GAFA1Q96PS6 74 aa-1.23□□□□□ -2.61
CCDC66-221ENST00000487739 NESP48681 1621 aa-1.23□□□□□ -2.61
CCDC66-221ENST00000487739 COL6A5A8TX70 2615 aa-1.23□□□□□ -2.61
CCDC66-221ENST00000487739 PRDM15P57071 1507 aaPredicted RBP-1.24□□□□□ -2.61
CCDC66-221ENST00000487739 ZFYVE16Q7Z3T8 1539 aa-1.24□□□□□ -2.61
CCDC66-221ENST00000487739 MT1HL1P0DM35 61 aa-1.24□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 183.9 ms