RNA–Protein interactions for RNA: ENST00000487234.1

TMEM50A-204, Transcript of transmembrane protein 50A, humanhuman

TSL 3

Gene TMEM50A, Length 511 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-204ENST00000487234 CYB5AP00167 134 aa-0.35□□□□□ -2.47
TMEM50A-204ENST00000487234 SNRPFP62306 86 aaKnown RBP-0.35□□□□□ -2.47
TMEM50A-204ENST00000487234 GAFA1Q96PS6 74 aa-0.35□□□□□ -2.47
TMEM50A-204ENST00000487234 RGPD4Q7Z3J3 1758 aa-0.35□□□□□ -2.47
TMEM50A-204ENST00000487234 NEBP20929 6669 aa-0.35□□□□□ -2.47
TMEM50A-204ENST00000487234 AKAP13Q12802 2813 aa-0.36□□□□□ -2.47
TMEM50A-204ENST00000487234 NBEAL1Q6ZS30 2694 aa-0.36□□□□□ -2.47
TMEM50A-204ENST00000487234 BCORQ6W2J9 1755 aa-0.36□□□□□ -2.47
TMEM50A-204ENST00000487234 TRAV21A0A0B4J279 112 aa-0.36□□□□□ -2.47
TMEM50A-204ENST00000487234 TDRG1Q3Y452 100 aa-0.36□□□□□ -2.47
TMEM50A-204ENST00000487234 LINC00643Q86TS7 51 aa-0.36□□□□□ -2.47
TMEM50A-204ENST00000487234 PDZD2O15018 2839 aa-0.36□□□□□ -2.47
TMEM50A-204ENST00000487234 PKHD1P08F94 4074 aa-0.36□□□□□ -2.47
TMEM50A-204ENST00000487234 SVEP1Q4LDE5 3571 aa-0.37□□□□□ -2.47
TMEM50A-204ENST00000487234 RGPD3A6NKT7 1758 aaPredicted RBP-0.37□□□□□ -2.47
TMEM50A-204ENST00000487234 UBR3Q6ZT12 1888 aa-0.37□□□□□ -2.47
TMEM50A-204ENST00000487234 TMEM131LA2VDJ0 1609 aa-0.38□□□□□ -2.47
TMEM50A-204ENST00000487234 USP32Q8NFA0 1604 aa-0.38□□□□□ -2.47
TMEM50A-204ENST00000487234 COX6B2Q6YFQ2 88 aa-0.38□□□□□ -2.47
TMEM50A-204ENST00000487234 RABAC1Q9UI14 185 aa-0.38□□□□□ -2.47
TMEM50A-204ENST00000487234 LRRC9Q6ZRR7 1453 aa-0.38□□□□□ -2.47
TMEM50A-204ENST00000487234 PREX1Q8TCU6 1659 aa-0.38□□□□□ -2.47
TMEM50A-204ENST00000487234 CEBPZOSA8MTT3 80 aa-0.39□□□□□ -2.47
TMEM50A-204ENST00000487234 NDUFA3O95167 84 aa-0.39□□□□□ -2.47
TMEM50A-204ENST00000487234 KRTAP6-2Q3LI66 62 aa-0.39□□□□□ -2.47
TMEM50A-204ENST00000487234 FLGP20930 4061 aaPredicted RBP-0.4□□□□□ -2.47
TMEM50A-204ENST00000487234 HECTD1Q9ULT8 2610 aa-0.4□□□□□ -2.47
TMEM50A-204ENST00000487234 GNG2P59768 71 aa-0.4□□□□□ -2.47
TMEM50A-204ENST00000487234 RPL38P63173 70 aaKnown RBP-0.4□□□□□ -2.47
TMEM50A-204ENST00000487234 TGP01266 2768 aa-0.4□□□□□ -2.47
TMEM50A-204ENST00000487234 ADAMTS12P58397 1594 aa-0.4□□□□□ -2.47
TMEM50A-204ENST00000487234 SETD2Q9BYW2 2564 aaPredicted RBP-0.41□□□□□ -2.47
TMEM50A-204ENST00000487234 PTPN23Q9H3S7 1636 aa-0.41□□□□□ -2.47
TMEM50A-204ENST00000487234 ACYP1P07311 99 aa-0.41□□□□□ -2.48
TMEM50A-204ENST00000487234 SPRR2AP35326 72 aa-0.41□□□□□ -2.48
TMEM50A-204ENST00000487234 KRTAP19-7Q3SYF9 63 aa-0.41□□□□□ -2.48
TMEM50A-204ENST00000487234 WFDC9Q8NEX5 89 aa-0.41□□□□□ -2.48
TMEM50A-204ENST00000487234 KIF14Q15058 1648 aa-0.42□□□□□ -2.48
TMEM50A-204ENST00000487234 CICQ96RK0 1608 aaPredicted RBP-0.42□□□□□ -2.48
TMEM50A-204ENST00000487234 PRRC2CQ9Y520 2896 aaKnown RBP-0.42□□□□□ -2.48
TMEM50A-204ENST00000487234 NBASA2RRP1 2371 aa-0.42□□□□□ -2.48
TMEM50A-204ENST00000487234 SUPT6HQ7KZ85 1726 aaKnown RBP-0.42□□□□□ -2.48
TMEM50A-204ENST00000487234 PDE4DIPQ5VU43 2346 aa-0.42□□□□□ -2.48
TMEM50A-204ENST00000487234 RGPD8O14715 1765 aaPredicted RBP-0.42□□□□□ -2.48
TMEM50A-204ENST00000487234 RGPD5Q99666 1765 aa-0.42□□□□□ -2.48
TMEM50A-204ENST00000487234 ZNF831Q5JPB2 1677 aa-0.43□□□□□ -2.48
TMEM50A-204ENST00000487234 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.43□□□□□ -2.48
TMEM50A-204ENST00000487234 PPLO60437 1756 aa-0.43□□□□□ -2.48
TMEM50A-204ENST00000487234 NCOA2Q15596 1464 aa-0.43□□□□□ -2.48
TMEM50A-204ENST00000487234 POLR1AO95602 1720 aaPredicted RBP-0.44□□□□□ -2.48
TMEM50A-204ENST00000487234 UACAQ9BZF9 1416 aa-0.44□□□□□ -2.48
TMEM50A-204ENST00000487234 MAP3K4Q9Y6R4 1608 aa-0.44□□□□□ -2.48
TMEM50A-204ENST00000487234 NDUFB1O75438 58 aa-0.44□□□□□ -2.48
TMEM50A-204ENST00000487234 TNRC18O15417 2968 aaPredicted RBP-0.44□□□□□ -2.48
TMEM50A-204ENST00000487234 SMARCA2P51531 1590 aa-0.45□□□□□ -2.48
TMEM50A-204ENST00000487234 CREBBPQ92793 2442 aa-0.45□□□□□ -2.48
TMEM50A-204ENST00000487234 PKD1P98161 4303 aa-0.45□□□□□ -2.48
TMEM50A-204ENST00000487234 URB2Q14146 1524 aaKnown RBP-0.45□□□□□ -2.48
TMEM50A-204ENST00000487234 MED14O60244 1454 aa-0.46□□□□□ -2.48
TMEM50A-204ENST00000487234 DOT1LQ8TEK3 1739 aa-0.46□□□□□ -2.48
TMEM50A-204ENST00000487234 KANTRA0A1W2PQU2 76 aa-0.46□□□□□ -2.48
TMEM50A-204ENST00000487234 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.46□□□□□ -2.48
TMEM50A-204ENST00000487234 SPTBN4Q9H254 2564 aa-0.47□□□□□ -2.48
TMEM50A-204ENST00000487234 SONP18583 2426 aaKnown RBP-0.47□□□□□ -2.49
TMEM50A-204ENST00000487234 LTN1O94822 1766 aa-0.47□□□□□ -2.49
TMEM50A-204ENST00000487234 NWD1Q149M9 1564 aa-0.48□□□□□ -2.49
TMEM50A-204ENST00000487234 IFI6P09912 130 aa-0.48□□□□□ -2.49
TMEM50A-204ENST00000487234 SPRR2EP22531 72 aa-0.48□□□□□ -2.49
TMEM50A-204ENST00000487234 C4AP0C0L4 1744 aa-0.48□□□□□ -2.49
TMEM50A-204ENST00000487234 C4BP0C0L5 1744 aa-0.48□□□□□ -2.49
TMEM50A-204ENST00000487234 TIAM2Q8IVF5 1701 aa-0.48□□□□□ -2.49
TMEM50A-204ENST00000487234 NF1P21359 2839 aa-0.48□□□□□ -2.49
TMEM50A-204ENST00000487234 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.48□□□□□ -2.49
TMEM50A-204ENST00000487234 ST20Q9HBF5 79 aa-0.49□□□□□ -2.49
TMEM50A-204ENST00000487234 DSPP15924 2871 aaKnown RBP-0.49□□□□□ -2.49
TMEM50A-204ENST00000487234 MAGI3Q5TCQ9 1506 aa-0.49□□□□□ -2.49
TMEM50A-204ENST00000487234 LYSTQ99698 3801 aa-0.5□□□□□ -2.49
TMEM50A-204ENST00000487234 KMT2CQ8NEZ4 4911 aaKnown RBP-0.5□□□□□ -2.49
TMEM50A-204ENST00000487234 PCLOQ9Y6V0 5065 aa-0.5□□□□□ -2.49
TMEM50A-204ENST00000487234 LCE6AA0A183 80 aa-0.5□□□□□ -2.49
TMEM50A-204ENST00000487234 UMAD1C9J7I0 102 aa-0.5□□□□□ -2.49
TMEM50A-204ENST00000487234 C3orf79P0CE67 100 aa-0.5□□□□□ -2.49
TMEM50A-204ENST00000487234 DEFB121Q5J5C9 76 aa-0.5□□□□□ -2.49
TMEM50A-204ENST00000487234 RB1CC1Q8TDY2 1594 aa-0.5□□□□□ -2.49
TMEM50A-204ENST00000487234 LAMA5O15230 3695 aa-0.51□□□□□ -2.49
TMEM50A-204ENST00000487234 H0YGG7 62 aa-0.51□□□□□ -2.49
TMEM50A-204ENST00000487234 PIK3C2BO00750 1634 aa-0.51□□□□□ -2.49
TMEM50A-204ENST00000487234 NESP48681 1621 aa-0.51□□□□□ -2.49
TMEM50A-204ENST00000487234 PRO3102Q9H379 93 aa-0.51□□□□□ -2.49
TMEM50A-204ENST00000487234 EPG5Q9HCE0 2579 aa-0.51□□□□□ -2.49
TMEM50A-204ENST00000487234 DIP2BQ9P265 1576 aa-0.51□□□□□ -2.49
TMEM50A-204ENST00000487234 MXRA5Q9NR99 2828 aa-0.51□□□□□ -2.49
TMEM50A-204ENST00000487234 DNAH9Q9NYC9 4486 aa-0.52□□□□□ -2.49
TMEM50A-204ENST00000487234 WIZO95785 1651 aa-0.52□□□□□ -2.49
TMEM50A-204ENST00000487234 IFI27P40305 119 aaPredicted RBP-0.52□□□□□ -2.49
TMEM50A-204ENST00000487234 LINC00158P58513 81 aa-0.52□□□□□ -2.49
TMEM50A-204ENST00000487234 ADIRFQ15847 76 aa-0.52□□□□□ -2.49
TMEM50A-204ENST00000487234 SPG11Q96JI7 2443 aa-0.52□□□□□ -2.49
TMEM50A-204ENST00000487234 ARFGEF2Q9Y6D5 1785 aa-0.52□□□□□ -2.49
TMEM50A-204ENST00000487234 H0YAA0 97 aa-0.53□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms