RNA–Protein interactions for RNA: ENST00000486855.1

PHTF1-211, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 3

Gene PHTF1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-211ENST00000486855 SMCO4Q9NRQ5 59 aa3.18□□□□□ -1.9
PHTF1-211ENST00000486855 TRAPPC1Q9Y5R8 145 aa3.18□□□□□ -1.9
PHTF1-211ENST00000486855 KRTAP4-16G5E9R7 235 aaPredicted RBP3.17□□□□□ -1.9
PHTF1-211ENST00000486855 H3BRM9 83 aa3.17□□□□□ -1.9
PHTF1-211ENST00000486855 APOC3P02656 99 aa3.17□□□□□ -1.9
PHTF1-211ENST00000486855 PFN2P35080 140 aa3.17□□□□□ -1.9
PHTF1-211ENST00000486855 COX17Q14061 63 aa3.17□□□□□ -1.9
PHTF1-211ENST00000486855 FAM229BQ4G0N7 80 aa3.17□□□□□ -1.9
PHTF1-211ENST00000486855 TMEM126AQ9H061 195 aa3.17□□□□□ -1.9
PHTF1-211ENST00000486855 TRAV12-1A0A0B4J245 112 aa3.16□□□□□ -1.9
PHTF1-211ENST00000486855 CFC1BP0CG36 223 aa3.16□□□□□ -1.9
PHTF1-211ENST00000486855 CFC1P0CG37 223 aa3.16□□□□□ -1.9
PHTF1-211ENST00000486855 NDUFA6P56556 154 aa3.16□□□□□ -1.9
PHTF1-211ENST00000486855 TSPEAR-AS2P59090 65 aa3.16□□□□□ -1.9
PHTF1-211ENST00000486855 BAGE3Q86Y29 109 aa3.16□□□□□ -1.9
PHTF1-211ENST00000486855 CBLN2Q8IUK8 224 aa3.16□□□□□ -1.9
PHTF1-211ENST00000486855 FAM218AQ96MZ4 157 aa3.16□□□□□ -1.9
PHTF1-211ENST00000486855 SPANXB1Q9NS25 103 aaPredicted RBP3.16□□□□□ -1.9
PHTF1-211ENST00000486855 LOC105371267A0A1B0GV96 52 aa3.15□□□□□ -1.91
PHTF1-211ENST00000486855 SNAPINO95295 136 aa3.15□□□□□ -1.91
PHTF1-211ENST00000486855 CRYGAP11844 174 aa3.15□□□□□ -1.91
PHTF1-211ENST00000486855 SPRR1AP35321 89 aa3.15□□□□□ -1.91
PHTF1-211ENST00000486855 S100A12P80511 92 aa3.15□□□□□ -1.91
PHTF1-211ENST00000486855 PRR4Q16378 134 aa3.15□□□□□ -1.91
PHTF1-211ENST00000486855 TMEM170BQ5T4T1 132 aa3.15□□□□□ -1.91
PHTF1-211ENST00000486855 SVBPQ8N300 66 aa3.15□□□□□ -1.91
PHTF1-211ENST00000486855 C3orf22Q8N5N4 141 aa3.15□□□□□ -1.91
PHTF1-211ENST00000486855 NKAPP1Q8N9T2 125 aa3.15□□□□□ -1.91
PHTF1-211ENST00000486855 TYMSOSQ8TAI1 123 aa3.15□□□□□ -1.91
PHTF1-211ENST00000486855 CHCHD1Q96BP2 118 aaKnown RBP3.15□□□□□ -1.91
PHTF1-211ENST00000486855 PLEKHB2Q96CS7 222 aa3.15□□□□□ -1.91
PHTF1-211ENST00000486855 RETNLBQ9BQ08 111 aa3.15□□□□□ -1.91
PHTF1-211ENST00000486855 A0A1B0GWB2 263 aa3.14□□□□□ -1.91
PHTF1-211ENST00000486855 UBE2AP49459 152 aa3.14□□□□□ -1.91
PHTF1-211ENST00000486855 FAM19A2Q8N3H0 131 aa3.14□□□□□ -1.91
PHTF1-211ENST00000486855 IFI27L1Q96BM0 104 aa3.14□□□□□ -1.91
PHTF1-211ENST00000486855 LOC107984156A0A0G2JMH3 177 aa3.13□□□□□ -1.91
PHTF1-211ENST00000486855 SMIM13P0DJ93 91 aa3.13□□□□□ -1.91
PHTF1-211ENST00000486855 SFTA2Q6UW10 78 aa3.13□□□□□ -1.91
PHTF1-211ENST00000486855 FAM19A1Q7Z5A9 133 aa3.13□□□□□ -1.91
PHTF1-211ENST00000486855 ARL17AQ8IVW1 177 aa3.13□□□□□ -1.91
PHTF1-211ENST00000486855 LINC00304Q8N9R0 145 aa3.13□□□□□ -1.91
PHTF1-211ENST00000486855 SMCR5Q8TEV8 140 aa3.13□□□□□ -1.91
PHTF1-211ENST00000486855 SPRR4Q96PI1 79 aa3.13□□□□□ -1.91
PHTF1-211ENST00000486855 A6NDN8 102 aa3.12□□□□□ -1.91
PHTF1-211ENST00000486855 SERF1AO75920 110 aa3.12□□□□□ -1.91
PHTF1-211ENST00000486855 TRGC2P03986 189 aa3.12□□□□□ -1.91
PHTF1-211ENST00000486855 CD164Q04900 197 aa3.12□□□□□ -1.91
PHTF1-211ENST00000486855 TPRXLQ17RH7 258 aa3.12□□□□□ -1.91
PHTF1-211ENST00000486855 MIR7-3HGQ8N6C7 128 aa3.12□□□□□ -1.91
PHTF1-211ENST00000486855 LINC00337Q8N6G1 96 aa3.12□□□□□ -1.91
PHTF1-211ENST00000486855 LITAFQ99732 161 aa3.12□□□□□ -1.91
PHTF1-211ENST00000486855 KCNQ1DNQ9H478 68 aa3.12□□□□□ -1.91
PHTF1-211ENST00000486855 TRBV10-3A0A0K0K1G6 114 aa3.11□□□□□ -1.91
PHTF1-211ENST00000486855 COLCA2A8K830 154 aa3.11□□□□□ -1.91
PHTF1-211ENST00000486855 E9PLD3 99 aa3.11□□□□□ -1.91
PHTF1-211ENST00000486855 NCR3O14931 201 aa3.11□□□□□ -1.91
PHTF1-211ENST00000486855 ERC2-IT1O76042 136 aa3.11□□□□□ -1.91
PHTF1-211ENST00000486855 LINC00158P58513 81 aa3.11□□□□□ -1.91
PHTF1-211ENST00000486855 LINC00483Q53H64 154 aa3.11□□□□□ -1.91
PHTF1-211ENST00000486855 SOSTDC1Q6X4U4 206 aa3.11□□□□□ -1.91
PHTF1-211ENST00000486855 DAND5Q8N907 189 aa3.11□□□□□ -1.91
PHTF1-211ENST00000486855 Q9BRP9 147 aa3.11□□□□□ -1.91
PHTF1-211ENST00000486855 IGKV2D-26A0A0A0MRZ7 120 aa3.1□□□□□ -1.91
PHTF1-211ENST00000486855 NDUFA5Q16718 116 aa3.1□□□□□ -1.91
PHTF1-211ENST00000486855 PMCHL2Q9BQD1 86 aa3.1□□□□□ -1.91
PHTF1-211ENST00000486855 HIGD2AQ9BW72 106 aa3.1□□□□□ -1.91
PHTF1-211ENST00000486855 KRTAP4-1Q9BYQ7 146 aa3.1□□□□□ -1.91
PHTF1-211ENST00000486855 NDUFA12Q9UI09 145 aa3.1□□□□□ -1.91
PHTF1-211ENST00000486855 FLGP20930 4061 aaPredicted RBP3.09□□□□□ -1.91
PHTF1-211ENST00000486855 LEPROTO15243 131 aa3.09□□□□□ -1.91
PHTF1-211ENST00000486855 IGLV6-57P01721 117 aa3.09□□□□□ -1.91
PHTF1-211ENST00000486855 KRTAP13-3Q3SY46 172 aa3.09□□□□□ -1.91
PHTF1-211ENST00000486855 ADAMTSL4-AS1Q5T5F5 129 aa3.09□□□□□ -1.91
PHTF1-211ENST00000486855 Q8NBF4 154 aa3.09□□□□□ -1.91
PHTF1-211ENST00000486855 IGLV7-46A0A075B6I9 117 aa3.08□□□□□ -1.92
PHTF1-211ENST00000486855 MYMXA0A1B0GTQ4 84 aa3.08□□□□□ -1.92
PHTF1-211ENST00000486855 J3QQQ9 107 aa3.08□□□□□ -1.92
PHTF1-211ENST00000486855 LEPROTL1O95214 131 aa3.08□□□□□ -1.92
PHTF1-211ENST00000486855 PLNP26678 52 aa3.08□□□□□ -1.92
PHTF1-211ENST00000486855 MEIG1Q5JSS6 88 aa3.08□□□□□ -1.92
PHTF1-211ENST00000486855 NOTCH2NLQ7Z3S9 236 aa3.08□□□□□ -1.92
PHTF1-211ENST00000486855 A0A0J9YXY3 114 aa3.07□□□□□ -1.92
PHTF1-211ENST00000486855 TRBV10-2A0A0K0K1G8 114 aa3.07□□□□□ -1.92
PHTF1-211ENST00000486855 Q6ZRX8 168 aa3.07□□□□□ -1.92
PHTF1-211ENST00000486855 HIST1H2BKO60814 126 aa3.06□□□□□ -1.92
PHTF1-211ENST00000486855 DPM2O94777 84 aa3.06□□□□□ -1.92
PHTF1-211ENST00000486855 NDUFC2O95298 119 aa3.06□□□□□ -1.92
PHTF1-211ENST00000486855 IGKCP01834 107 aa3.06□□□□□ -1.92
PHTF1-211ENST00000486855 HIST1H2BJP06899 126 aa3.06□□□□□ -1.92
PHTF1-211ENST00000486855 FABP4P15090 132 aa3.06□□□□□ -1.92
PHTF1-211ENST00000486855 HIST1H2BOP23527 126 aa3.06□□□□□ -1.92
PHTF1-211ENST00000486855 DDTP30046 118 aa3.06□□□□□ -1.92
PHTF1-211ENST00000486855 HIST1H2BBP33778 126 aa3.06□□□□□ -1.92
PHTF1-211ENST00000486855 NMUP48645 174 aa3.06□□□□□ -1.92
PHTF1-211ENST00000486855 HIST1H2BDP58876 126 aa3.06□□□□□ -1.92
PHTF1-211ENST00000486855 HIST1H2BCP62807 126 aa3.06□□□□□ -1.92
PHTF1-211ENST00000486855 HIST2H2BEQ16778 126 aa3.06□□□□□ -1.92
PHTF1-211ENST00000486855 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.06□□□□□ -1.92
PHTF1-211ENST00000486855 FP248Q71RG6 208 aaPredicted RBP3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms