RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 J3QL48 77 aa7.89□□□□□ -1.15
HDAC6-229ENST00000486665 HINT1P49773 126 aaPredicted RBP7.89□□□□□ -1.15
HDAC6-229ENST00000486665 KCNQ1DNQ9H478 68 aa7.88□□□□□ -1.15
HDAC6-229ENST00000486665 TRAV13-2A0A0B4J235 113 aa7.87□□□□□ -1.15
HDAC6-229ENST00000486665 TMEM126AQ9H061 195 aa7.87□□□□□ -1.15
HDAC6-229ENST00000486665 UBR4Q5T4S7 5183 aa7.87□□□□□ -1.15
HDAC6-229ENST00000486665 TMEM238LA0A1B0GVL6 79 aa7.86□□□□□ -1.15
HDAC6-229ENST00000486665 A6NJY4 79 aa7.86□□□□□ -1.15
HDAC6-229ENST00000486665 NHP2Q9NX24 153 aaKnown RBP7.86□□□□□ -1.15
HDAC6-229ENST00000486665 TRAV23DV6A0A075B6W5 121 aa7.85□□□□□ -1.15
HDAC6-229ENST00000486665 A0A0B4J2C4 111 aa7.85□□□□□ -1.15
HDAC6-229ENST00000486665 KRTAP29-1A8MX34 341 aaPredicted RBP7.85□□□□□ -1.15
HDAC6-229ENST00000486665 K7ERJ3 54 aa7.85□□□□□ -1.15
HDAC6-229ENST00000486665 PRYO14603 147 aa7.85□□□□□ -1.15
HDAC6-229ENST00000486665 RPL13AP40429 203 aaKnown RBP7.85□□□□□ -1.15
HDAC6-229ENST00000486665 KRTAP10-4P60372 401 aaPredicted RBP7.85□□□□□ -1.15
HDAC6-229ENST00000486665 RPL37AP61513 92 aaKnown RBP7.85□□□□□ -1.15
HDAC6-229ENST00000486665 C1orf137Q5JT78 98 aa7.85□□□□□ -1.15
HDAC6-229ENST00000486665 REG3GQ6UW15 175 aa7.85□□□□□ -1.15
HDAC6-229ENST00000486665 RAB37Q96AX2 223 aa7.85□□□□□ -1.15
HDAC6-229ENST00000486665 A0A1B0GWB2 263 aa7.84□□□□□ -1.15
HDAC6-229ENST00000486665 PCP4L1A6NKN8 68 aa7.84□□□□□ -1.15
HDAC6-229ENST00000486665 M0R143 59 aa7.84□□□□□ -1.15
HDAC6-229ENST00000486665 SPRR1AP35321 89 aa7.84□□□□□ -1.15
HDAC6-229ENST00000486665 KRTAP4-16G5E9R7 235 aaPredicted RBP7.83□□□□□ -1.16
HDAC6-229ENST00000486665 BCE1O60756 84 aa7.83□□□□□ -1.16
HDAC6-229ENST00000486665 SMIM11BQ8TCY0 68 aa7.83□□□□□ -1.16
HDAC6-229ENST00000486665 PRO1854Q9UHT4 67 aa7.83□□□□□ -1.16
HDAC6-229ENST00000486665 H7C2G1 150 aa7.82□□□□□ -1.16
HDAC6-229ENST00000486665 ZNF73O43830 326 aaPredicted RBP7.81□□□□□ -1.16
HDAC6-229ENST00000486665 IGLV7-43P04211 117 aa7.81□□□□□ -1.16
HDAC6-229ENST00000486665 BATFQ16520 125 aa7.81□□□□□ -1.16
HDAC6-229ENST00000486665 PLA2G1BP04054 148 aaKnown RBP7.8□□□□□ -1.16
HDAC6-229ENST00000486665 C6orf99Q4VX62 202 aa7.8□□□□□ -1.16
HDAC6-229ENST00000486665 FAM19A1Q7Z5A9 133 aa7.8□□□□□ -1.16
HDAC6-229ENST00000486665 ETDCA0A1B0GVM5 59 aa7.79□□□□□ -1.16
HDAC6-229ENST00000486665 B5MCH6 92 aa7.79□□□□□ -1.16
HDAC6-229ENST00000486665 KRTAP13-1Q8IUC0 172 aa7.79□□□□□ -1.16
HDAC6-229ENST00000486665 DIRC1Q969H9 104 aa7.79□□□□□ -1.16
HDAC6-229ENST00000486665 CBY1Q9Y3M2 126 aa7.79□□□□□ -1.16
HDAC6-229ENST00000486665 RPL28P46779 137 aaKnown RBP7.78□□□□□ -1.16
HDAC6-229ENST00000486665 UBE2AP49459 152 aa7.78□□□□□ -1.16
HDAC6-229ENST00000486665 PRLHP81277 87 aa7.78□□□□□ -1.16
HDAC6-229ENST00000486665 SNHG12Q9BXW3 62 aa7.78□□□□□ -1.16
HDAC6-229ENST00000486665 ZNF861PO60384 105 aa7.77□□□□□ -1.17
HDAC6-229ENST00000486665 TSPAN13O95857 204 aa7.76□□□□□ -1.17
HDAC6-229ENST00000486665 COX7BP24311 80 aa7.76□□□□□ -1.17
HDAC6-229ENST00000486665 Q1RN00 199 aa7.76□□□□□ -1.17
HDAC6-229ENST00000486665 TRBV7-6A0A0J9YX20 115 aa7.75□□□□□ -1.17
HDAC6-229ENST00000486665 H0Y9J4 135 aa7.75□□□□□ -1.17
HDAC6-229ENST00000486665 Q9BRP9 147 aa7.75□□□□□ -1.17
HDAC6-229ENST00000486665 ELOF1P60002 83 aaKnown RBP7.74□□□□□ -1.17
HDAC6-229ENST00000486665 Q6ZRX8 168 aa7.74□□□□□ -1.17
HDAC6-229ENST00000486665 SMCR5Q8TEV8 140 aa7.74□□□□□ -1.17
HDAC6-229ENST00000486665 TRIAP1O43715 76 aa7.73□□□□□ -1.17
HDAC6-229ENST00000486665 ERC2-IT1O76042 136 aa7.73□□□□□ -1.17
HDAC6-229ENST00000486665 VAMP3Q15836 100 aa7.72□□□□□ -1.17
HDAC6-229ENST00000486665 SPINK6Q6UWN8 80 aa7.72□□□□□ -1.17
HDAC6-229ENST00000486665 NAA38Q9BRA0 125 aaKnown RBP7.72□□□□□ -1.17
HDAC6-229ENST00000486665 HIGD2AQ9BW72 106 aa7.72□□□□□ -1.17
HDAC6-229ENST00000486665 TAX1BP3O14907 124 aa7.71□□□□□ -1.18
HDAC6-229ENST00000486665 PSMB2P49721 201 aa7.71□□□□□ -1.18
HDAC6-229ENST00000486665 OXTP01178 125 aa7.7□□□□□ -1.18
HDAC6-229ENST00000486665 LINC00575Q6W349 94 aa7.7□□□□□ -1.18
HDAC6-229ENST00000486665 FAM218AQ96MZ4 157 aa7.69□□□□□ -1.18
HDAC6-229ENST00000486665 DHRS4-AS1Q9P1J3 65 aa7.69□□□□□ -1.18
HDAC6-229ENST00000486665 H0YGX0 51 aa7.68□□□□□ -1.18
HDAC6-229ENST00000486665 ST20-AS1Q8NBB2 130 aa7.68□□□□□ -1.18
HDAC6-229ENST00000486665 C9orf118A6NHY6 69 aa7.67□□□□□ -1.18
HDAC6-229ENST00000486665 SCGB1C2P0DMR2 95 aa7.67□□□□□ -1.18
HDAC6-229ENST00000486665 COL5A1-AS1Q5SY13 56 aa7.67□□□□□ -1.18
HDAC6-229ENST00000486665 CLEC2BQ92478 149 aa7.67□□□□□ -1.18
HDAC6-229ENST00000486665 TNXBP22105 4242 aa7.67□□□□□ -1.18
HDAC6-229ENST00000486665 H3BUT2 72 aa7.66□□□□□ -1.18
HDAC6-229ENST00000486665 hADV29S1A0JD25 119 aa7.65□□□□□ -1.18
HDAC6-229ENST00000486665 COX6CP09669 75 aa7.65□□□□□ -1.18
HDAC6-229ENST00000486665 MT1HL1P0DM35 61 aa7.65□□□□□ -1.18
HDAC6-229ENST00000486665 SPRR4Q96PI1 79 aa7.65□□□□□ -1.18
HDAC6-229ENST00000486665 ANAPC11Q9NYG5 84 aa7.65□□□□□ -1.18
HDAC6-229ENST00000486665 SLC25A20O43772 301 aa7.64□□□□□ -1.19
HDAC6-229ENST00000486665 KRTAP1-4P0C5Y4 121 aa7.64□□□□□ -1.19
HDAC6-229ENST00000486665 LRP2P98164 4655 aa7.62□□□□□ -1.19
HDAC6-229ENST00000486665 LINC01547P58512 204 aaPredicted RBP7.62□□□□□ -1.19
HDAC6-229ENST00000486665 GAGE2AQ6NT46 116 aa7.62□□□□□ -1.19
HDAC6-229ENST00000486665 DEFB105AQ8NG35 78 aa7.62□□□□□ -1.19
HDAC6-229ENST00000486665 A0A1W2PPM0 123 aa7.61□□□□□ -1.19
HDAC6-229ENST00000486665 TCL1BO95988 128 aa7.61□□□□□ -1.19
HDAC6-229ENST00000486665 Q6ZQY7 126 aa7.61□□□□□ -1.19
HDAC6-229ENST00000486665 ZNF706Q9Y5V0 76 aaPredicted RBP7.61□□□□□ -1.19
HDAC6-229ENST00000486665 RNF213Q63HN8 5207 aa7.61□□□□□ -1.19
HDAC6-229ENST00000486665 A0A1B0GX51 115 aa7.6□□□□□ -1.19
HDAC6-229ENST00000486665 LST1O00453 97 aa7.6□□□□□ -1.19
HDAC6-229ENST00000486665 LINC00483Q53H64 154 aa7.59□□□□□ -1.19
HDAC6-229ENST00000486665 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.59□□□□□ -1.19
HDAC6-229ENST00000486665 Q8N377 158 aa7.59□□□□□ -1.19
HDAC6-229ENST00000486665 IGLV5-48A0A075B6I7 105 aa7.58□□□□□ -1.2
HDAC6-229ENST00000486665 SNCGO76070 127 aa7.58□□□□□ -1.2
HDAC6-229ENST00000486665 SPRR1BP22528 89 aa7.58□□□□□ -1.2
HDAC6-229ENST00000486665 A0A087X002 238 aa7.57□□□□□ -1.2
HDAC6-229ENST00000486665 TEX49A0A1B0GTD5 131 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms