RNA–Protein interactions for RNA: ENST00000486532.5

R3HDM1-217, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-217ENST00000486532 IGKV3OR2-268A0A0C4DH90 116 aa2.45□□□□□ -2.02
R3HDM1-217ENST00000486532 IGKV2D-40P01614 121 aaPredicted RBP2.45□□□□□ -2.02
R3HDM1-217ENST00000486532 DEFB112Q30KQ8 113 aa2.45□□□□□ -2.02
R3HDM1-217ENST00000486532 SMG1Q96Q15 3661 aaKnown RBP2.45□□□□□ -2.02
R3HDM1-217ENST00000486532 ZZEF1O43149 2961 aa2.45□□□□□ -2.02
R3HDM1-217ENST00000486532 SPAG17Q6Q759 2223 aa2.45□□□□□ -2.02
R3HDM1-217ENST00000486532 VPS13AQ96RL7 3174 aa2.45□□□□□ -2.02
R3HDM1-217ENST00000486532 FBN2P35556 2912 aa2.44□□□□□ -2.02
R3HDM1-217ENST00000486532 NBEAQ8NFP9 2946 aa2.44□□□□□ -2.02
R3HDM1-217ENST00000486532 LOC110117498A0A087WWA1 95 aa2.44□□□□□ -2.02
R3HDM1-217ENST00000486532 NDUFA4O00483 81 aa2.44□□□□□ -2.02
R3HDM1-217ENST00000486532 NDUFA3O95167 84 aa2.44□□□□□ -2.02
R3HDM1-217ENST00000486532 IGLV3-1P01715 115 aa2.44□□□□□ -2.02
R3HDM1-217ENST00000486532 RNASE3P12724 160 aaKnown RBP2.44□□□□□ -2.02
R3HDM1-217ENST00000486532 ZNF625Q96I27 306 aaPredicted RBP2.44□□□□□ -2.02
R3HDM1-217ENST00000486532 TENM4Q6N022 2769 aa2.44□□□□□ -2.02
R3HDM1-217ENST00000486532 ABCA2Q9BZC7 2435 aa2.43□□□□□ -2.02
R3HDM1-217ENST00000486532 FREM1Q5H8C1 2179 aa2.43□□□□□ -2.02
R3HDM1-217ENST00000486532 A0A1W2PNN7 141 aa2.43□□□□□ -2.02
R3HDM1-217ENST00000486532 SPINK7P58062 85 aa2.43□□□□□ -2.02
R3HDM1-217ENST00000486532 DSPP15924 2871 aaKnown RBP2.43□□□□□ -2.02
R3HDM1-217ENST00000486532 SDK1Q7Z5N4 2213 aa2.42□□□□□ -2.02
R3HDM1-217ENST00000486532 CEP295Q9C0D2 2601 aa2.42□□□□□ -2.02
R3HDM1-217ENST00000486532 TRIOO75962 3097 aa2.42□□□□□ -2.02
R3HDM1-217ENST00000486532 IGF2RP11717 2491 aa2.42□□□□□ -2.02
R3HDM1-217ENST00000486532 ALPK2Q86TB3 2170 aa2.42□□□□□ -2.02
R3HDM1-217ENST00000486532 ETDCA0A1B0GVM5 59 aa2.42□□□□□ -2.02
R3HDM1-217ENST00000486532 ZNF861PO60384 105 aa2.42□□□□□ -2.02
R3HDM1-217ENST00000486532 R4GN34 69 aa2.42□□□□□ -2.02
R3HDM1-217ENST00000486532 TECTAO75443 2155 aa2.42□□□□□ -2.02
R3HDM1-217ENST00000486532 CACNA1CQ13936 2221 aa2.41□□□□□ -2.02
R3HDM1-217ENST00000486532 SETD2Q9BYW2 2564 aaPredicted RBP2.41□□□□□ -2.02
R3HDM1-217ENST00000486532 MRPL33O75394 65 aaKnown RBP2.41□□□□□ -2.02
R3HDM1-217ENST00000486532 PRB2P02812 416 aaPredicted RBP2.41□□□□□ -2.02
R3HDM1-217ENST00000486532 RPL37AP61513 92 aaKnown RBP2.41□□□□□ -2.02
R3HDM1-217ENST00000486532 RPL38P63173 70 aaKnown RBP2.41□□□□□ -2.02
R3HDM1-217ENST00000486532 KCNQ1DNQ9H478 68 aa2.41□□□□□ -2.02
R3HDM1-217ENST00000486532 SPG11Q96JI7 2443 aa2.41□□□□□ -2.02
R3HDM1-217ENST00000486532 OTOGLQ3ZCN5 2332 aa2.41□□□□□ -2.02
R3HDM1-217ENST00000486532 PCNX1Q96RV3 2341 aa2.41□□□□□ -2.02
R3HDM1-217ENST00000486532 IGSF10Q6WRI0 2623 aa2.4□□□□□ -2.02
R3HDM1-217ENST00000486532 BRWD1Q9NSI6 2320 aa2.4□□□□□ -2.02
R3HDM1-217ENST00000486532 TNCP24821 2201 aa2.4□□□□□ -2.03
R3HDM1-217ENST00000486532 TRGV2A0A075B6R0 118 aa2.4□□□□□ -2.03
R3HDM1-217ENST00000486532 J3QKU1 62 aa2.4□□□□□ -2.03
R3HDM1-217ENST00000486532 PRB1P04280 392 aa2.4□□□□□ -2.03
R3HDM1-217ENST00000486532 HAMPP81172 84 aa2.4□□□□□ -2.03
R3HDM1-217ENST00000486532 COA5Q86WW8 74 aa2.4□□□□□ -2.03
R3HDM1-217ENST00000486532 SSC5DA1L4H1 1573 aa2.4□□□□□ -2.03
R3HDM1-217ENST00000486532 ITPR1Q14643 2758 aa2.39□□□□□ -2.03
R3HDM1-217ENST00000486532 LOC400499M0QZD8 3231 aa2.39□□□□□ -2.03
R3HDM1-217ENST00000486532 A0A087WTM6 91 aa2.39□□□□□ -2.03
R3HDM1-217ENST00000486532 TRGV1A0A0A0MS02 117 aa2.39□□□□□ -2.03
R3HDM1-217ENST00000486532 CCL26Q9Y258 94 aa2.39□□□□□ -2.03
R3HDM1-217ENST00000486532 RELNP78509 3460 aa2.38□□□□□ -2.03
R3HDM1-217ENST00000486532 ASXL3Q9C0F0 2248 aa2.38□□□□□ -2.03
R3HDM1-217ENST00000486532 TLN1Q9Y490 2541 aaKnown RBP2.38□□□□□ -2.03
R3HDM1-217ENST00000486532 NBDYA0A0U1RRE5 68 aa2.38□□□□□ -2.03
R3HDM1-217ENST00000486532 IGLV3-19P01714 112 aa2.38□□□□□ -2.03
R3HDM1-217ENST00000486532 COX7BP24311 80 aa2.38□□□□□ -2.03
R3HDM1-217ENST00000486532 C5orf56Q8N8D9 126 aa2.38□□□□□ -2.03
R3HDM1-217ENST00000486532 LRRK2Q5S007 2527 aa2.38□□□□□ -2.03
R3HDM1-217ENST00000486532 FRYLO94915 3013 aa2.38□□□□□ -2.03
R3HDM1-217ENST00000486532 A0A1B0GU69 56 aa2.37□□□□□ -2.03
R3HDM1-217ENST00000486532 NCR3O14931 201 aa2.37□□□□□ -2.03
R3HDM1-217ENST00000486532 C10orf55Q5SWW7 151 aa2.37□□□□□ -2.03
R3HDM1-217ENST00000486532 CHD9Q3L8U1 2897 aa2.36□□□□□ -2.03
R3HDM1-217ENST00000486532 COL12A1Q99715 3063 aa2.36□□□□□ -2.03
R3HDM1-217ENST00000486532 MED13LQ71F56 2210 aa2.36□□□□□ -2.03
R3HDM1-217ENST00000486532 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.36□□□□□ -2.03
R3HDM1-217ENST00000486532 A0A0G2JQZ4 141 aa2.36□□□□□ -2.03
R3HDM1-217ENST00000486532 IGKV2-29A2NJV5 120 aaPredicted RBP2.36□□□□□ -2.03
R3HDM1-217ENST00000486532 KRTAP21-3Q3LHN1 58 aa2.36□□□□□ -2.03
R3HDM1-217ENST00000486532 SMIM2Q9BVW6 85 aa2.36□□□□□ -2.03
R3HDM1-217ENST00000486532 PTPRQQ9UMZ3 2332 aa2.36□□□□□ -2.03
R3HDM1-217ENST00000486532 FREM2Q5SZK8 3169 aa2.36□□□□□ -2.03
R3HDM1-217ENST00000486532 NBEAL1Q6ZS30 2694 aa2.35□□□□□ -2.03
R3HDM1-217ENST00000486532 DOPEY2Q9Y3R5 2298 aa2.35□□□□□ -2.03
R3HDM1-217ENST00000486532 CHD7Q9P2D1 2997 aa2.35□□□□□ -2.03
R3HDM1-217ENST00000486532 DNHD1Q96M86 4753 aa2.35□□□□□ -2.03
R3HDM1-217ENST00000486532 SEC16AO15027 2179 aa2.35□□□□□ -2.03
R3HDM1-217ENST00000486532 LINC00959A0A1B0GUT2 108 aa2.35□□□□□ -2.03
R3HDM1-217ENST00000486532 IGKV4-1P06312 121 aa2.35□□□□□ -2.03
R3HDM1-217ENST00000486532 ACYP2P14621 99 aa2.35□□□□□ -2.03
R3HDM1-217ENST00000486532 DEFB134Q4QY38 66 aa2.35□□□□□ -2.03
R3HDM1-217ENST00000486532 CNFNQ9BYD5 112 aa2.35□□□□□ -2.03
R3HDM1-217ENST00000486532 LINC00472Q9H8W2 130 aa2.35□□□□□ -2.03
R3HDM1-217ENST00000486532 CELSR3Q9NYQ7 3312 aa2.34□□□□□ -2.03
R3HDM1-217ENST00000486532 FN1P02751 2386 aaKnown RBP2.34□□□□□ -2.03
R3HDM1-217ENST00000486532 HRES1P13985 223 aa2.34□□□□□ -2.03
R3HDM1-217ENST00000486532 Q96NJ1 140 aa2.34□□□□□ -2.03
R3HDM1-217ENST00000486532 NOTCH1P46531 2555 aa2.34□□□□□ -2.04
R3HDM1-217ENST00000486532 DEFB131BA0A096LNP1 70 aa2.33□□□□□ -2.04
R3HDM1-217ENST00000486532 INE1O15225 51 aa2.33□□□□□ -2.04
R3HDM1-217ENST00000486532 TFF3Q07654 80 aa2.33□□□□□ -2.04
R3HDM1-217ENST00000486532 DMXL2Q8TDJ6 3036 aa2.33□□□□□ -2.04
R3HDM1-217ENST00000486532 ATRQ13535 2644 aa2.33□□□□□ -2.04
R3HDM1-217ENST00000486532 RP1L1Q8IWN7 2480 aaPredicted RBP2.32□□□□□ -2.04
R3HDM1-217ENST00000486532 MTORP42345 2549 aa2.32□□□□□ -2.04
R3HDM1-217ENST00000486532 IGLV6-57P01721 117 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 241.4 ms