RNA–Protein interactions for RNA: ENST00000485140.1

VPS50-217, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-217ENST00000485140 UTP20O75691 2785 aaKnown RBP-1.36□□□□□ -2.63
VPS50-217ENST00000485140 DYNC1H1Q14204 4646 aaKnown RBP-1.36□□□□□ -2.63
VPS50-217ENST00000485140 CORTO00230 105 aa-1.36□□□□□ -2.63
VPS50-217ENST00000485140 NMSQ5H8A3 153 aa-1.36□□□□□ -2.63
VPS50-217ENST00000485140 DMXL2Q8TDJ6 3036 aa-1.36□□□□□ -2.63
VPS50-217ENST00000485140 CUX1P39880 1505 aa-1.36□□□□□ -2.63
VPS50-217ENST00000485140 EYSQ5T1H1 3165 aa-1.37□□□□□ -2.63
VPS50-217ENST00000485140 CHD1O14646 1710 aa-1.37□□□□□ -2.63
VPS50-217ENST00000485140 SPHKAPQ2M3C7 1700 aa-1.37□□□□□ -2.63
VPS50-217ENST00000485140 ABCC5O15440 1437 aa-1.37□□□□□ -2.63
VPS50-217ENST00000485140 KIF20BQ96Q89 1820 aa-1.37□□□□□ -2.63
VPS50-217ENST00000485140 hADV29S1A0JD25 119 aa-1.37□□□□□ -2.63
VPS50-217ENST00000485140 ASIPP42127 132 aa-1.37□□□□□ -2.63
VPS50-217ENST00000485140 TOPAZ1Q8N9V7 1692 aa-1.37□□□□□ -2.63
VPS50-217ENST00000485140 CFAP46Q8IYW2 2715 aa-1.37□□□□□ -2.63
VPS50-217ENST00000485140 TRIOO75962 3097 aa-1.37□□□□□ -2.63
VPS50-217ENST00000485140 MON2Q7Z3U7 1717 aa-1.37□□□□□ -2.63
VPS50-217ENST00000485140 EIF4G3O43432 1585 aaKnown RBP-1.38□□□□□ -2.63
VPS50-217ENST00000485140 DNAH7Q8WXX0 4024 aa-1.38□□□□□ -2.63
VPS50-217ENST00000485140 RGPD2P0DJD1 1756 aa-1.38□□□□□ -2.63
VPS50-217ENST00000485140 C9orf92A6NGG3 77 aa-1.38□□□□□ -2.63
VPS50-217ENST00000485140 S100A1P23297 94 aa-1.38□□□□□ -2.63
VPS50-217ENST00000485140 FRYQ5TBA9 3013 aa-1.39□□□□□ -2.63
VPS50-217ENST00000485140 ABCC2Q92887 1545 aa-1.39□□□□□ -2.63
VPS50-217ENST00000485140 CC2D2AQ9P2K1 1620 aa-1.39□□□□□ -2.63
VPS50-217ENST00000485140 DLEU1O43261 78 aa-1.39□□□□□ -2.63
VPS50-217ENST00000485140 MPC2O95563 127 aa-1.39□□□□□ -2.63
VPS50-217ENST00000485140 UQCRHP07919 91 aa-1.39□□□□□ -2.63
VPS50-217ENST00000485140 MT1HL1P0DM35 61 aa-1.39□□□□□ -2.63
VPS50-217ENST00000485140 MRPS10P82664 201 aaKnown RBP-1.39□□□□□ -2.63
VPS50-217ENST00000485140 GTF2H5Q6ZYL4 71 aa-1.39□□□□□ -2.63
VPS50-217ENST00000485140 C5P01031 1676 aa-1.39□□□□□ -2.63
VPS50-217ENST00000485140 PZPP20742 1482 aa-1.4□□□□□ -2.63
VPS50-217ENST00000485140 MLH3Q9UHC1 1453 aa-1.4□□□□□ -2.63
VPS50-217ENST00000485140 SAMD9Q5K651 1589 aa-1.4□□□□□ -2.63
VPS50-217ENST00000485140 FAM186AA6NE01 2351 aa-1.41□□□□□ -2.63
VPS50-217ENST00000485140 TMEM218A2RU14 115 aa-1.41□□□□□ -2.64
VPS50-217ENST00000485140 EFCAB10A6NFE3 127 aa-1.41□□□□□ -2.64
VPS50-217ENST00000485140 CHD7Q9P2D1 2997 aa-1.42□□□□□ -2.64
VPS50-217ENST00000485140 MYO9AB2RTY4 2548 aa-1.42□□□□□ -2.64
VPS50-217ENST00000485140 COX6B2Q6YFQ2 88 aa-1.42□□□□□ -2.64
VPS50-217ENST00000485140 GNG8Q9UK08 70 aa-1.42□□□□□ -2.64
VPS50-217ENST00000485140 ANKRD50Q9ULJ7 1429 aa-1.42□□□□□ -2.64
VPS50-217ENST00000485140 DNAH8Q96JB1 4490 aa-1.42□□□□□ -2.64
VPS50-217ENST00000485140 ABCA3Q99758 1704 aa-1.43□□□□□ -2.64
VPS50-217ENST00000485140 A0A1B0GV90 55 aa-1.43□□□□□ -2.64
VPS50-217ENST00000485140 K7EP34 96 aa-1.43□□□□□ -2.64
VPS50-217ENST00000485140 HMGN3Q15651 99 aa-1.43□□□□□ -2.64
VPS50-217ENST00000485140 ALKAL2Q6UX46 152 aa-1.43□□□□□ -2.64
VPS50-217ENST00000485140 TRGV9Q99603 122 aa-1.43□□□□□ -2.64
VPS50-217ENST00000485140 RAPGEF2Q9Y4G8 1499 aa-1.43□□□□□ -2.64
VPS50-217ENST00000485140 GNGT2O14610 69 aa-1.44□□□□□ -2.64
VPS50-217ENST00000485140 TMEM203Q969S6 136 aa-1.44□□□□□ -2.64
VPS50-217ENST00000485140 UBR3Q6ZT12 1888 aa-1.45□□□□□ -2.64
VPS50-217ENST00000485140 H7BZZ5 65 aa-1.45□□□□□ -2.64
VPS50-217ENST00000485140 IGLC2P0DOY2 106 aa-1.45□□□□□ -2.64
VPS50-217ENST00000485140 IGLC3P0DOY3 106 aa-1.45□□□□□ -2.64
VPS50-217ENST00000485140 RPL38P63173 70 aaKnown RBP-1.45□□□□□ -2.64
VPS50-217ENST00000485140 FAM135AQ9P2D6 1515 aa-1.45□□□□□ -2.64
VPS50-217ENST00000485140 D6R8Y8 96 aa-1.46□□□□□ -2.64
VPS50-217ENST00000485140 H0YAA0 97 aa-1.46□□□□□ -2.64
VPS50-217ENST00000485140 DEFB1P60022 68 aa-1.46□□□□□ -2.64
VPS50-217ENST00000485140 MUSTN1Q8IVN3 82 aa-1.46□□□□□ -2.64
VPS50-217ENST00000485140 CEP290O15078 2479 aa-1.47□□□□□ -2.64
VPS50-217ENST00000485140 PREX1Q8TCU6 1659 aa-1.47□□□□□ -2.64
VPS50-217ENST00000485140 TLN1Q9Y490 2541 aaKnown RBP-1.47□□□□□ -2.64
VPS50-217ENST00000485140 LEPROTL1O95214 131 aa-1.47□□□□□ -2.64
VPS50-217ENST00000485140 MT1BP07438 61 aa-1.47□□□□□ -2.64
VPS50-217ENST00000485140 ZNF720Q7Z2F6 126 aa-1.47□□□□□ -2.64
VPS50-217ENST00000485140 BOD1L1Q8NFC6 3051 aa-1.47□□□□□ -2.65
VPS50-217ENST00000485140 C5orf42Q9H799 3197 aa-1.47□□□□□ -2.65
VPS50-217ENST00000485140 MAGI2Q86UL8 1455 aa-1.48□□□□□ -2.65
VPS50-217ENST00000485140 QSER1Q2KHR3 1735 aa-1.48□□□□□ -2.65
VPS50-217ENST00000485140 RGPD8O14715 1765 aaPredicted RBP-1.48□□□□□ -2.65
VPS50-217ENST00000485140 RGPD5Q99666 1765 aa-1.48□□□□□ -2.65
VPS50-217ENST00000485140 PRDM15P57071 1507 aaPredicted RBP-1.48□□□□□ -2.65
VPS50-217ENST00000485140 ATOX1O00244 68 aa-1.48□□□□□ -2.65
VPS50-217ENST00000485140 ETDBQ3ZM63 59 aa-1.48□□□□□ -2.65
VPS50-217ENST00000485140 ACACBO00763 2458 aa-1.49□□□□□ -2.65
VPS50-217ENST00000485140 COX7BP24311 80 aa-1.49□□□□□ -2.65
VPS50-217ENST00000485140 MT1XP80297 61 aa-1.49□□□□□ -2.65
VPS50-217ENST00000485140 PMCHL2Q9BQD1 86 aa-1.49□□□□□ -2.65
VPS50-217ENST00000485140 NDUFA3O95167 84 aa-1.5□□□□□ -2.65
VPS50-217ENST00000485140 SERP2Q8N6R1 65 aa-1.5□□□□□ -2.65
VPS50-217ENST00000485140 PKD1L3Q7Z443 1732 aa-1.5□□□□□ -2.65
VPS50-217ENST00000485140 CRYBG1Q9Y4K1 1723 aa-1.5□□□□□ -2.65
VPS50-217ENST00000485140 RANBP2P49792 3224 aaKnown RBP-1.51□□□□□ -2.65
VPS50-217ENST00000485140 C4AP0C0L4 1744 aa-1.51□□□□□ -2.65
VPS50-217ENST00000485140 C4BP0C0L5 1744 aa-1.51□□□□□ -2.65
VPS50-217ENST00000485140 C2orf88Q9BSF0 95 aa-1.51□□□□□ -2.65
VPS50-217ENST00000485140 LRRC9Q6ZRR7 1453 aa-1.51□□□□□ -2.65
VPS50-217ENST00000485140 C20orf202A1L168 122 aa-1.52□□□□□ -2.65
VPS50-217ENST00000485140 NRXN1Q9ULB1 1477 aa-1.52□□□□□ -2.65
VPS50-217ENST00000485140 SMG1Q96Q15 3661 aaKnown RBP-1.52□□□□□ -2.65
VPS50-217ENST00000485140 UQCRHLA0A096LP55 91 aa-1.53□□□□□ -2.65
VPS50-217ENST00000485140 LRBAP50851 2863 aa-1.53□□□□□ -2.65
VPS50-217ENST00000485140 DEFB110Q30KQ9 67 aa-1.53□□□□□ -2.65
VPS50-217ENST00000485140 S4R3F8 94 aa-1.53□□□□□ -2.65
VPS50-217ENST00000485140 CSMD1Q96PZ7 3565 aa-1.53□□□□□ -2.65
VPS50-217ENST00000485140 ADGRG4Q8IZF6 3080 aa-1.53□□□□□ -2.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms