RNA–Protein interactions for RNA: ENST00000484081.1

CUL3-210, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-210ENST00000484081 ITSN1Q15811 1721 aa0.57□□□□□ -2.32
CUL3-210ENST00000484081 TIAM2Q8IVF5 1701 aa0.57□□□□□ -2.32
CUL3-210ENST00000484081 FMN2Q9NZ56 1722 aa0.57□□□□□ -2.32
CUL3-210ENST00000484081 ATP7AQ04656 1500 aa0.57□□□□□ -2.32
CUL3-210ENST00000484081 LMTK2Q8IWU2 1503 aa0.57□□□□□ -2.32
CUL3-210ENST00000484081 CNOT1A5YKK6 2376 aaKnown RBP0.56□□□□□ -2.32
CUL3-210ENST00000484081 CD163L1Q9NR16 1453 aa0.56□□□□□ -2.32
CUL3-210ENST00000484081 CEP290O15078 2479 aa0.56□□□□□ -2.32
CUL3-210ENST00000484081 MRPL33O75394 65 aaKnown RBP0.56□□□□□ -2.32
CUL3-210ENST00000484081 CRIPTQ9P021 101 aa0.56□□□□□ -2.32
CUL3-210ENST00000484081 GNG13Q9P2W3 67 aa0.56□□□□□ -2.32
CUL3-210ENST00000484081 AKAP6Q13023 2319 aa0.56□□□□□ -2.32
CUL3-210ENST00000484081 TRANK1O15050 2925 aa0.56□□□□□ -2.32
CUL3-210ENST00000484081 USP32Q8NFA0 1604 aa0.56□□□□□ -2.32
CUL3-210ENST00000484081 LAMA2P24043 3122 aaKnown RBP0.55□□□□□ -2.32
CUL3-210ENST00000484081 POLR1AO95602 1720 aaPredicted RBP0.55□□□□□ -2.32
CUL3-210ENST00000484081 PDE4DIPQ5VU43 2346 aa0.55□□□□□ -2.32
CUL3-210ENST00000484081 CELSR2Q9HCU4 2923 aa0.55□□□□□ -2.32
CUL3-210ENST00000484081 ABCA10Q8WWZ4 1543 aa0.55□□□□□ -2.32
CUL3-210ENST00000484081 PTPN13Q12923 2485 aa0.55□□□□□ -2.32
CUL3-210ENST00000484081 SZT2Q5T011 3432 aa0.55□□□□□ -2.32
CUL3-210ENST00000484081 APCP25054 2843 aa0.55□□□□□ -2.32
CUL3-210ENST00000484081 CDC42BPGQ6DT37 1551 aa0.55□□□□□ -2.32
CUL3-210ENST00000484081 MROH2BQ7Z745 1585 aa0.55□□□□□ -2.32
CUL3-210ENST00000484081 MAST1Q9Y2H9 1570 aa0.55□□□□□ -2.32
CUL3-210ENST00000484081 TRAV21A0A0B4J279 112 aa0.55□□□□□ -2.32
CUL3-210ENST00000484081 H3BVH4 76 aa0.55□□□□□ -2.32
CUL3-210ENST00000484081 CCL22O00626 93 aa0.55□□□□□ -2.32
CUL3-210ENST00000484081 COX7BP24311 80 aa0.55□□□□□ -2.32
CUL3-210ENST00000484081 NREPQ16612 68 aa0.55□□□□□ -2.32
CUL3-210ENST00000484081 ABCA9Q8IUA7 1624 aa0.55□□□□□ -2.32
CUL3-210ENST00000484081 ARFGEF2Q9Y6D5 1785 aa0.55□□□□□ -2.32
CUL3-210ENST00000484081 PRXQ9BXM0 1461 aa0.54□□□□□ -2.32
CUL3-210ENST00000484081 EFCAB6Q5THR3 1501 aa0.54□□□□□ -2.32
CUL3-210ENST00000484081 UGGT1Q9NYU2 1555 aa0.54□□□□□ -2.32
CUL3-210ENST00000484081 DEPDC5O75140 1603 aa0.54□□□□□ -2.32
CUL3-210ENST00000484081 PREX2Q70Z35 1606 aa0.54□□□□□ -2.32
CUL3-210ENST00000484081 PREX1Q8TCU6 1659 aa0.54□□□□□ -2.32
CUL3-210ENST00000484081 LCE6AA0A183 80 aa0.54□□□□□ -2.32
CUL3-210ENST00000484081 I3L3M4 83 aa0.54□□□□□ -2.32
CUL3-210ENST00000484081 COX6B2Q6YFQ2 88 aa0.54□□□□□ -2.32
CUL3-210ENST00000484081 UBL5Q9BZL1 73 aa0.54□□□□□ -2.32
CUL3-210ENST00000484081 FLNBO75369 2602 aaKnown RBP0.54□□□□□ -2.32
CUL3-210ENST00000484081 PIEZO2Q9H5I5 2752 aa0.54□□□□□ -2.32
CUL3-210ENST00000484081 SPTA1P02549 2419 aa0.54□□□□□ -2.32
CUL3-210ENST00000484081 GVINP1Q7Z2Y8 2422 aa0.54□□□□□ -2.32
CUL3-210ENST00000484081 MADDQ8WXG6 1647 aa0.53□□□□□ -2.32
CUL3-210ENST00000484081 RNF17Q9BXT8 1623 aaKnown RBP0.53□□□□□ -2.32
CUL3-210ENST00000484081 ZNF831Q5JPB2 1677 aa0.53□□□□□ -2.32
CUL3-210ENST00000484081 UTRNP46939 3433 aa0.53□□□□□ -2.32
CUL3-210ENST00000484081 BCORQ6W2J9 1755 aa0.53□□□□□ -2.32
CUL3-210ENST00000484081 REV3LO60673 3130 aa0.53□□□□□ -2.32
CUL3-210ENST00000484081 EP400Q96L91 3159 aa0.53□□□□□ -2.32
CUL3-210ENST00000484081 CPSF4LA6NMK7 179 aaKnown RBP0.53□□□□□ -2.32
CUL3-210ENST00000484081 PHGR1C9JFL3 82 aa0.53□□□□□ -2.32
CUL3-210ENST00000484081 IFI6P09912 130 aa0.53□□□□□ -2.32
CUL3-210ENST00000484081 SFTA3P0C7M3 94 aa0.53□□□□□ -2.32
CUL3-210ENST00000484081 SPRR1BP22528 89 aa0.53□□□□□ -2.32
CUL3-210ENST00000484081 SPRR1AP35321 89 aa0.53□□□□□ -2.32
CUL3-210ENST00000484081 SERF2P84101 59 aa0.53□□□□□ -2.32
CUL3-210ENST00000484081 USP9XQ93008 2570 aaPredicted RBP0.53□□□□□ -2.32
CUL3-210ENST00000484081 SPTBN4Q9H254 2564 aa0.53□□□□□ -2.32
CUL3-210ENST00000484081 PCNTO95613 3336 aa0.53□□□□□ -2.32
CUL3-210ENST00000484081 ZNF292O60281 2723 aa0.53□□□□□ -2.32
CUL3-210ENST00000484081 TOP2AP11388 1531 aaKnown RBP0.53□□□□□ -2.33
CUL3-210ENST00000484081 SYCP2Q9BX26 1530 aa0.53□□□□□ -2.33
CUL3-210ENST00000484081 PLXNC1O60486 1568 aa0.53□□□□□ -2.33
CUL3-210ENST00000484081 ANK2Q01484 3957 aa0.53□□□□□ -2.33
CUL3-210ENST00000484081 CREBBPQ92793 2442 aa0.53□□□□□ -2.33
CUL3-210ENST00000484081 ABCA5Q8WWZ7 1642 aa0.53□□□□□ -2.33
CUL3-210ENST00000484081 PARP4Q9UKK3 1724 aaKnown RBP0.52□□□□□ -2.33
CUL3-210ENST00000484081 IGF2RP11717 2491 aa0.52□□□□□ -2.33
CUL3-210ENST00000484081 MTORP42345 2549 aa0.52□□□□□ -2.33
CUL3-210ENST00000484081 FASNP49327 2511 aaKnown RBP0.52□□□□□ -2.33
CUL3-210ENST00000484081 LOC730098B7Z3J9 87 aa0.52□□□□□ -2.33
CUL3-210ENST00000484081 SPINK1P00995 79 aa0.52□□□□□ -2.33
CUL3-210ENST00000484081 DEFB114Q30KQ6 69 aa0.52□□□□□ -2.33
CUL3-210ENST00000484081 Q9Y3F1 56 aa0.52□□□□□ -2.33
CUL3-210ENST00000484081 HILPDAQ9Y5L2 63 aa0.52□□□□□ -2.33
CUL3-210ENST00000484081 SETXQ7Z333 2677 aaKnown RBP0.52□□□□□ -2.33
CUL3-210ENST00000484081 SAMD9LQ8IVG5 1584 aa0.52□□□□□ -2.33
CUL3-210ENST00000484081 NDUFA4O00483 81 aa0.51□□□□□ -2.33
CUL3-210ENST00000484081 ABCC6O95255 1503 aa0.51□□□□□ -2.33
CUL3-210ENST00000484081 C3orf79P0CE67 100 aa0.51□□□□□ -2.33
CUL3-210ENST00000484081 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.51□□□□□ -2.335e-7■□□□□ 11
CUL3-210ENST00000484081 RICTORQ6R327 1708 aa0.51□□□□□ -2.33
CUL3-210ENST00000484081 ANKRD11Q6UB99 2663 aaPredicted RBP0.51□□□□□ -2.33
CUL3-210ENST00000484081 ABCA6Q8N139 1617 aa0.51□□□□□ -2.33
CUL3-210ENST00000484081 CEP250Q9BV73 2442 aa0.51□□□□□ -2.33
CUL3-210ENST00000484081 LRRK2Q5S007 2527 aa0.5□□□□□ -2.33
CUL3-210ENST00000484081 PCNX1Q96RV3 2341 aa0.5□□□□□ -2.33
CUL3-210ENST00000484081 SYNE2Q8WXH0 6885 aaKnown RBP0.5□□□□□ -2.33
CUL3-210ENST00000484081 DOT1LQ8TEK3 1739 aa0.5□□□□□ -2.33
CUL3-210ENST00000484081 CROCC2H7BZ55 1655 aa0.5□□□□□ -2.33
CUL3-210ENST00000484081 C3P01024 1663 aa0.5□□□□□ -2.33
CUL3-210ENST00000484081 ALS2Q96Q42 1657 aa0.5□□□□□ -2.33
CUL3-210ENST00000484081 TNRC6CQ9HCJ0 1690 aaKnown RBP0.5□□□□□ -2.33
CUL3-210ENST00000484081 KIF21BO75037 1637 aa0.5□□□□□ -2.33
CUL3-210ENST00000484081 USP24Q9UPU5 2620 aa0.5□□□□□ -2.33
CUL3-210ENST00000484081 K7EMI3 77 aa0.5□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms