RNA–Protein interactions for RNA: ENST00000482791.1

SNX27-205, Transcript of sorting nexin family member 27, humanhuman

TSL 3

Gene SNX27, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-205ENST00000482791 ITPR2Q14571 2701 aa0.29□□□□□ -2.36
SNX27-205ENST00000482791 PVALEFA0A1B0GWK0 134 aa0.29□□□□□ -2.36
SNX27-205ENST00000482791 CYB5AP00167 134 aa0.29□□□□□ -2.36
SNX27-205ENST00000482791 IGLC2P0DOY2 106 aa0.29□□□□□ -2.36
SNX27-205ENST00000482791 IGLC3P0DOY3 106 aa0.29□□□□□ -2.36
SNX27-205ENST00000482791 SMIM11AP58511 58 aa0.29□□□□□ -2.36
SNX27-205ENST00000482791 ALKAL2Q6UX46 152 aa0.29□□□□□ -2.36
SNX27-205ENST00000482791 UBE2D4Q9Y2X8 147 aa0.29□□□□□ -2.36
SNX27-205ENST00000482791 DMBT1Q9UGM3 2413 aaPredicted RBP0.28□□□□□ -2.36
SNX27-205ENST00000482791 LAMA3Q16787 3333 aa0.28□□□□□ -2.36
SNX27-205ENST00000482791 LRRC37AA6NMS7 1700 aa0.28□□□□□ -2.36
SNX27-205ENST00000482791 DCHS1Q96JQ0 3298 aa0.28□□□□□ -2.36
SNX27-205ENST00000482791 USMG5Q96IX5 58 aa0.28□□□□□ -2.36
SNX27-205ENST00000482791 FXYD6Q9H0Q3 95 aa0.28□□□□□ -2.36
SNX27-205ENST00000482791 SPEGQ15772 3267 aa0.28□□□□□ -2.37
SNX27-205ENST00000482791 RB1CC1Q8TDY2 1594 aa0.28□□□□□ -2.37
SNX27-205ENST00000482791 HRNRQ86YZ3 2850 aaPredicted RBP0.27□□□□□ -2.37
SNX27-205ENST00000482791 HERC2O95714 4834 aa0.27□□□□□ -2.37
SNX27-205ENST00000482791 ALKQ9UM73 1620 aa0.27□□□□□ -2.37
SNX27-205ENST00000482791 MAP1BP46821 2468 aaKnown RBP0.27□□□□□ -2.37
SNX27-205ENST00000482791 COL14A1Q05707 1796 aaKnown RBP0.27□□□□□ -2.37
SNX27-205ENST00000482791 IQCF6A8MYZ5 107 aa0.27□□□□□ -2.37
SNX27-205ENST00000482791 NMSQ5H8A3 153 aa0.27□□□□□ -2.37
SNX27-205ENST00000482791 PLIN4Q96Q06 1357 aa0.27□□□□□ -2.37
SNX27-205ENST00000482791 MUC12Q9UKN1 5478 aa0.27□□□□□ -2.37
SNX27-205ENST00000482791 WNK2Q9Y3S1 2297 aa0.26□□□□□ -2.37
SNX27-205ENST00000482791 TLN1Q9Y490 2541 aaKnown RBP0.26□□□□□ -2.37
SNX27-205ENST00000482791 TDRG1Q3Y452 100 aa0.26□□□□□ -2.37
SNX27-205ENST00000482791 KIF14Q15058 1648 aa0.26□□□□□ -2.37
SNX27-205ENST00000482791 NBEAQ8NFP9 2946 aa0.26□□□□□ -2.37
SNX27-205ENST00000482791 EYSQ5T1H1 3165 aa0.26□□□□□ -2.37
SNX27-205ENST00000482791 EP400Q96L91 3159 aa0.25□□□□□ -2.37
SNX27-205ENST00000482791 TLN2Q9Y4G6 2542 aa0.25□□□□□ -2.37
SNX27-205ENST00000482791 RGPD2P0DJD1 1756 aa0.25□□□□□ -2.37
SNX27-205ENST00000482791 RGPD1P0DJD0 1748 aa0.25□□□□□ -2.37
SNX27-205ENST00000482791 TMEM131LA2VDJ0 1609 aa0.25□□□□□ -2.37
SNX27-205ENST00000482791 NKTRP30414 1462 aaKnown RBP0.25□□□□□ -2.37
SNX27-205ENST00000482791 COX8AP10176 69 aa0.25□□□□□ -2.37
SNX27-205ENST00000482791 KLK9Q2XQG4 91 aa0.25□□□□□ -2.37
SNX27-205ENST00000482791 DEFB112Q30KQ8 113 aa0.25□□□□□ -2.37
SNX27-205ENST00000482791 MUC3AQ02505 3323 aa0.25□□□□□ -2.37
SNX27-205ENST00000482791 NIPBLQ6KC79 2804 aaeCLIP0.25□□□□□ -2.37
SNX27-205ENST00000482791 CFAP47Q6ZTR5 3102 aa0.24□□□□□ -2.37
SNX27-205ENST00000482791 CCDC141Q6ZP82 1450 aa0.24□□□□□ -2.37
SNX27-205ENST00000482791 CPSF4LA6NMK7 179 aaKnown RBP0.24□□□□□ -2.37
SNX27-205ENST00000482791 PLGLAQ15195 96 aa0.24□□□□□ -2.37
SNX27-205ENST00000482791 DEFB105AQ8NG35 78 aa0.24□□□□□ -2.37
SNX27-205ENST00000482791 APLNQ9ULZ1 77 aa0.24□□□□□ -2.37
SNX27-205ENST00000482791 HUWE1Q7Z6Z7 4374 aaKnown RBP0.24□□□□□ -2.37
SNX27-205ENST00000482791 FAT2Q9NYQ8 4349 aa0.23□□□□□ -2.37
SNX27-205ENST00000482791 I3L3M4 83 aa0.23□□□□□ -2.37
SNX27-205ENST00000482791 SNRPFP62306 86 aaKnown RBP0.23□□□□□ -2.37
SNX27-205ENST00000482791 LRBAP50851 2863 aa0.22□□□□□ -2.37
SNX27-205ENST00000482791 QSER1Q2KHR3 1735 aa0.22□□□□□ -2.37
SNX27-205ENST00000482791 WDR87Q6ZQQ6 2873 aa0.22□□□□□ -2.37
SNX27-205ENST00000482791 SUPT6HQ7KZ85 1726 aaKnown RBP0.22□□□□□ -2.37
SNX27-205ENST00000482791 RELNP78509 3460 aa0.22□□□□□ -2.37
SNX27-205ENST00000482791 MYMXA0A1B0GTQ4 84 aa0.22□□□□□ -2.37
SNX27-205ENST00000482791 MAP3K4Q9Y6R4 1608 aa0.22□□□□□ -2.37
SNX27-205ENST00000482791 UBR3Q6ZT12 1888 aa0.22□□□□□ -2.37
SNX27-205ENST00000482791 MED14O60244 1454 aa0.22□□□□□ -2.37
SNX27-205ENST00000482791 ATP7BP35670 1465 aa0.22□□□□□ -2.37
SNX27-205ENST00000482791 CSPG4Q6UVK1 2322 aa0.21□□□□□ -2.38
SNX27-205ENST00000482791 A0A1B0GUT8 65 aa0.21□□□□□ -2.38
SNX27-205ENST00000482791 LINC00643Q86TS7 51 aa0.21□□□□□ -2.38
SNX27-205ENST00000482791 RANBP2P49792 3224 aaKnown RBP0.21□□□□□ -2.38
SNX27-205ENST00000482791 LRRC7Q96NW7 1537 aa0.21□□□□□ -2.38
SNX27-205ENST00000482791 LAMA1P25391 3075 aa0.21□□□□□ -2.38
SNX27-205ENST00000482791 UACAQ9BZF9 1416 aa0.21□□□□□ -2.38
SNX27-205ENST00000482791 SPTY2D1-AS1A0A0U1RR47 76 aa0.2□□□□□ -2.38
SNX27-205ENST00000482791 RABAC1Q9UI14 185 aa0.2□□□□□ -2.38
SNX27-205ENST00000482791 KMT2AQ03164 3969 aa0.2□□□□□ -2.38
SNX27-205ENST00000482791 MAP1AP78559 2803 aaPredicted RBP0.19□□□□□ -2.38
SNX27-205ENST00000482791 BCORQ6W2J9 1755 aa0.19□□□□□ -2.38
SNX27-205ENST00000482791 CENPFP49454 3210 aa0.19□□□□□ -2.38
SNX27-205ENST00000482791 MYCBP2O75592 4640 aa0.19□□□□□ -2.38
SNX27-205ENST00000482791 CRYBG3Q68DQ2 2970 aa0.19□□□□□ -2.38
SNX27-205ENST00000482791 DNAH12Q6ZR08 3092 aa0.19□□□□□ -2.38
SNX27-205ENST00000482791 MAGI2Q86UL8 1455 aa0.19□□□□□ -2.38
SNX27-205ENST00000482791 NBPF19A0A087WUL8 3843 aa0.19□□□□□ -2.38
SNX27-205ENST00000482791 PRM1P04553 51 aa0.19□□□□□ -2.38
SNX27-205ENST00000482791 MRPL34Q9BQ48 92 aaKnown RBP0.19□□□□□ -2.38
SNX27-205ENST00000482791 NF1P21359 2839 aa0.19□□□□□ -2.38
SNX27-205ENST00000482791 FAT3Q8TDW7 4589 aa0.19□□□□□ -2.38
SNX27-205ENST00000482791 ZNF831Q5JPB2 1677 aa0.18□□□□□ -2.38
SNX27-205ENST00000482791 LOC400499M0QZD8 3231 aa0.18□□□□□ -2.38
SNX27-205ENST00000482791 C5orf42Q9H799 3197 aa0.18□□□□□ -2.38
SNX27-205ENST00000482791 SPINK4O60575 86 aa0.18□□□□□ -2.38
SNX27-205ENST00000482791 H1FX-AS1Q4G0G2 97 aa0.18□□□□□ -2.38
SNX27-205ENST00000482791 BRCA2P51587 3418 aa0.18□□□□□ -2.38
SNX27-205ENST00000482791 TNXBP22105 4242 aa0.18□□□□□ -2.38
SNX27-205ENST00000482791 MTORP42345 2549 aa0.17□□□□□ -2.38
SNX27-205ENST00000482791 SVEP1Q4LDE5 3571 aa0.17□□□□□ -2.38
SNX27-205ENST00000482791 CEBPZOSA8MTT3 80 aa0.17□□□□□ -2.38
SNX27-205ENST00000482791 POLR1AO95602 1720 aaPredicted RBP0.17□□□□□ -2.38
SNX27-205ENST00000482791 COX7BP24311 80 aa0.17□□□□□ -2.38
SNX27-205ENST00000482791 SPTAN1Q13813 2472 aaKnown RBP0.17□□□□□ -2.38
SNX27-205ENST00000482791 LELP1Q5T871 98 aa0.17□□□□□ -2.38
SNX27-205ENST00000482791 CFAP54Q96N23 3096 aa0.17□□□□□ -2.38
SNX27-205ENST00000482791 GAFA1Q96PS6 74 aa0.17□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms