RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 HERC1Q15751 4861 aa1.57□□□□□ -2.16
COPA-203ENST00000481040 TMEM14DPA8MWL7 114 aa1.57□□□□□ -2.16
COPA-203ENST00000481040 CHKB-CPT1BH3BT56 60 aa1.57□□□□□ -2.16
COPA-203ENST00000481040 K7EP34 96 aa1.57□□□□□ -2.16
COPA-203ENST00000481040 NDUFC1O43677 76 aa1.57□□□□□ -2.16
COPA-203ENST00000481040 SMIM5Q71RC9 77 aa1.57□□□□□ -2.16
COPA-203ENST00000481040 TRGV9Q99603 122 aa1.57□□□□□ -2.16
COPA-203ENST00000481040 UQCR10Q9UDW1 63 aa1.57□□□□□ -2.16
COPA-203ENST00000481040 C4BP0C0L5 1744 aa1.57□□□□□ -2.16
COPA-203ENST00000481040 CDC42BPAQ5VT25 1732 aa1.57□□□□□ -2.16
COPA-203ENST00000481040 PRXQ9BXM0 1461 aa1.56□□□□□ -2.16
COPA-203ENST00000481040 ABCA13Q86UQ4 5058 aa1.56□□□□□ -2.16
COPA-203ENST00000481040 M0R135 149 aa1.56□□□□□ -2.16
COPA-203ENST00000481040 HMGN4O00479 90 aa1.56□□□□□ -2.16
COPA-203ENST00000481040 APOC3P02656 99 aa1.56□□□□□ -2.16
COPA-203ENST00000481040 NMBP08949 121 aa1.56□□□□□ -2.16
COPA-203ENST00000481040 CDC42SE2Q9NRR3 84 aa1.56□□□□□ -2.16
COPA-203ENST00000481040 CACFD1Q9UGQ2 172 aa1.56□□□□□ -2.16
COPA-203ENST00000481040 PRO1854Q9UHT4 67 aa1.56□□□□□ -2.16
COPA-203ENST00000481040 SCN7AQ01118 1682 aa1.55□□□□□ -2.16
COPA-203ENST00000481040 ANK2Q01484 3957 aa1.55□□□□□ -2.16
COPA-203ENST00000481040 LOC285095A0A1B0GVY8 99 aa1.55□□□□□ -2.16
COPA-203ENST00000481040 H3BQF6 201 aa1.55□□□□□ -2.16
COPA-203ENST00000481040 TRAPPC2P0DI81 140 aa1.55□□□□□ -2.16
COPA-203ENST00000481040 TRAPPC2BP0DI82 140 aa1.55□□□□□ -2.16
COPA-203ENST00000481040 TDRG1Q3Y452 100 aa1.55□□□□□ -2.16
COPA-203ENST00000481040 SVEP1Q4LDE5 3571 aa1.55□□□□□ -2.16
COPA-203ENST00000481040 VPS13CQ709C8 3753 aa1.55□□□□□ -2.16
COPA-203ENST00000481040 SYS1-DBNDD2H3BUS1 97 aa1.54□□□□□ -2.16
COPA-203ENST00000481040 H7BZZ5 65 aa1.54□□□□□ -2.16
COPA-203ENST00000481040 CYB5AP00167 134 aa1.54□□□□□ -2.16
COPA-203ENST00000481040 SFTA2Q6UW10 78 aa1.54□□□□□ -2.16
COPA-203ENST00000481040 Q6ZRX8 168 aa1.54□□□□□ -2.16
COPA-203ENST00000481040 GCC2Q8IWJ2 1684 aa1.54□□□□□ -2.16
COPA-203ENST00000481040 A0A0G2JND7 137 aa1.53□□□□□ -2.16
COPA-203ENST00000481040 CTXND1A0A1B0GTU2 59 aa1.53□□□□□ -2.16
COPA-203ENST00000481040 C10orf142B7Z368 130 aa1.53□□□□□ -2.16
COPA-203ENST00000481040 COX6CP09669 75 aa1.53□□□□□ -2.16
COPA-203ENST00000481040 CENPEQ02224 2701 aa1.53□□□□□ -2.16
COPA-203ENST00000481040 PEA15Q15121 130 aa1.53□□□□□ -2.16
COPA-203ENST00000481040 DCHS2Q6V1P9 2916 aa1.53□□□□□ -2.16
COPA-203ENST00000481040 AMELXQ99217 191 aa1.53□□□□□ -2.16
COPA-203ENST00000481040 NXT2Q9NPJ8 142 aaKnown RBP1.53□□□□□ -2.16
COPA-203ENST00000481040 APCP25054 2843 aa1.53□□□□□ -2.17
COPA-203ENST00000481040 MGAM2Q2M2H8 2515 aa1.52□□□□□ -2.17
COPA-203ENST00000481040 LRRC37AA6NMS7 1700 aa1.52□□□□□ -2.17
COPA-203ENST00000481040 PRKDCP78527 4128 aaKnown RBP1.52□□□□□ -2.17
COPA-203ENST00000481040 IGLC7A0M8Q6 106 aa1.52□□□□□ -2.17
COPA-203ENST00000481040 F8VRH5 84 aa1.52□□□□□ -2.17
COPA-203ENST00000481040 TMEM170BQ5T4T1 132 aa1.52□□□□□ -2.17
COPA-203ENST00000481040 S100A16Q96FQ6 103 aaKnown RBP1.52□□□□□ -2.17
COPA-203ENST00000481040 PRR15LQ9BU68 103 aa1.52□□□□□ -2.17
COPA-203ENST00000481040 TSC2P49815 1807 aa1.52□□□□□ -2.17
COPA-203ENST00000481040 ZNF236Q9UL36 1845 aa1.52□□□□□ -2.17
COPA-203ENST00000481040 DDX60LQ5H9U9 1706 aaKnown RBP1.52□□□□□ -2.17
COPA-203ENST00000481040 UQCRHLA0A096LP55 91 aa1.51□□□□□ -2.17
COPA-203ENST00000481040 CFAP126Q5VTH2 177 aa1.51□□□□□ -2.17
COPA-203ENST00000481040 PLIN4Q96Q06 1357 aa1.5□□□□□ -2.17
COPA-203ENST00000481040 MYO7AQ13402 2215 aa1.5□□□□□ -2.17
COPA-203ENST00000481040 DOT1LQ8TEK3 1739 aa1.5□□□□□ -2.17
COPA-203ENST00000481040 A0A0D9SG42 100 aa1.5□□□□□ -2.17
COPA-203ENST00000481040 GCHFRP30047 84 aa1.5□□□□□ -2.17
COPA-203ENST00000481040 BAGE2Q86Y30 109 aa1.5□□□□□ -2.17
COPA-203ENST00000481040 HIGD1BQ9P298 99 aa1.5□□□□□ -2.17
COPA-203ENST00000481040 CRCT1Q9UGL9 99 aa1.5□□□□□ -2.17
COPA-203ENST00000481040 CSPG4Q6UVK1 2322 aa1.5□□□□□ -2.17
COPA-203ENST00000481040 CEP162Q5TB80 1403 aa1.49□□□□□ -2.17
COPA-203ENST00000481040 ARFGEF2Q9Y6D5 1785 aa1.49□□□□□ -2.17
COPA-203ENST00000481040 TENM2Q9NT68 2774 aa1.49□□□□□ -2.17
COPA-203ENST00000481040 NBASA2RRP1 2371 aa1.49□□□□□ -2.17
COPA-203ENST00000481040 FAM208AQ9UK61 1670 aaKnown RBP1.49□□□□□ -2.17
COPA-203ENST00000481040 IQGAP3Q86VI3 1631 aa1.49□□□□□ -2.17
COPA-203ENST00000481040 FAM223AQ8IWN6 122 aa1.49□□□□□ -2.17
COPA-203ENST00000481040 SMIM4Q8WVI0 70 aa1.49□□□□□ -2.17
COPA-203ENST00000481040 LINC01558Q9Y6Z2 57 aa1.49□□□□□ -2.17
COPA-203ENST00000481040 TENM3Q9P273 2699 aa1.49□□□□□ -2.17
COPA-203ENST00000481040 MXRA5Q9NR99 2828 aa1.48□□□□□ -2.17
COPA-203ENST00000481040 TRBV25-1A0A075B6N4 114 aa1.48□□□□□ -2.17
COPA-203ENST00000481040 G3V318 75 aa1.48□□□□□ -2.17
COPA-203ENST00000481040 UQCR11O14957 56 aa1.48□□□□□ -2.17
COPA-203ENST00000481040 KRTAP4-1Q9BYQ7 146 aa1.48□□□□□ -2.17
COPA-203ENST00000481040 RABAC1Q9UI14 185 aa1.48□□□□□ -2.17
COPA-203ENST00000481040 ARL2-SNX15V9GYD0 113 aa1.48□□□□□ -2.17
COPA-203ENST00000481040 CCDC141Q6ZP82 1450 aa1.48□□□□□ -2.17
COPA-203ENST00000481040 ZNF469Q96JG9 3925 aaPredicted RBP1.48□□□□□ -2.17
COPA-203ENST00000481040 SPTBN1Q01082 2364 aaKnown RBP1.48□□□□□ -2.17
COPA-203ENST00000481040 WNK1Q9H4A3 2382 aa1.48□□□□□ -2.17
COPA-203ENST00000481040 PPLO60437 1756 aa1.47□□□□□ -2.17
COPA-203ENST00000481040 SACSQ9NZJ4 4579 aa1.47□□□□□ -2.17
COPA-203ENST00000481040 DDX60Q8IY21 1712 aaKnown RBP1.47□□□□□ -2.17
COPA-203ENST00000481040 UQCRHP07919 91 aa1.47□□□□□ -2.17
COPA-203ENST00000481040 S100A13Q99584 98 aa1.47□□□□□ -2.17
COPA-203ENST00000481040 EDC4Q6P2E9 1401 aaKnown RBP1.47□□□□□ -2.17
COPA-203ENST00000481040 ASXL3Q9C0F0 2248 aa1.47□□□□□ -2.17
COPA-203ENST00000481040 FAT4Q6V0I7 4981 aa1.46□□□□□ -2.18
COPA-203ENST00000481040 ACANP16112 2415 aa1.46□□□□□ -2.18
COPA-203ENST00000481040 SAA2P0DJI9 122 aaPredicted RBP1.46□□□□□ -2.18
COPA-203ENST00000481040 PMCHL1Q16048 86 aa1.46□□□□□ -2.18
COPA-203ENST00000481040 ALKAL2Q6UX46 152 aa1.46□□□□□ -2.18
COPA-203ENST00000481040 FAM223BA6NKX1 122 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms