RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 LINC00588Q9Y4M8 146 aa6.93□□□□□ -1.3
SIK3-210ENST00000480468 TEX15Q9BXT5 2789 aa6.93□□□□□ -1.3
SIK3-210ENST00000480468 ZFYVE26Q68DK2 2539 aa6.93□□□□□ -1.3
SIK3-210ENST00000480468 MP68P56378 58 aa6.93□□□□□ -1.3
SIK3-210ENST00000480468 MRPL55Q7Z7F7 128 aaKnown RBP6.92□□□□□ -1.3
SIK3-210ENST00000480468 Q9BRP9 147 aa6.92□□□□□ -1.3
SIK3-210ENST00000480468 LRRK2Q5S007 2527 aa6.92□□□□□ -1.3
SIK3-210ENST00000480468 PRR4Q16378 134 aa6.91□□□□□ -1.3
SIK3-210ENST00000480468 KRTAP26-1Q6PEX3 210 aa6.91□□□□□ -1.3
SIK3-210ENST00000480468 Q8N9P0 234 aaPredicted RBP6.91□□□□□ -1.3
SIK3-210ENST00000480468 FLNCQ14315 2725 aa6.91□□□□□ -1.3
SIK3-210ENST00000480468 H3BPC8 53 aa6.91□□□□□ -1.3
SIK3-210ENST00000480468 Q6ZRX8 168 aa6.91□□□□□ -1.3
SIK3-210ENST00000480468 GCN1Q92616 2671 aaKnown RBP6.9□□□□□ -1.3
SIK3-210ENST00000480468 CFAP46Q8IYW2 2715 aa6.9□□□□□ -1.3
SIK3-210ENST00000480468 POLQO75417 2590 aa6.89□□□□□ -1.31
SIK3-210ENST00000480468 ATP11AUNQ6ZP68 121 aa6.89□□□□□ -1.31
SIK3-210ENST00000480468 C15orf56Q8N910 161 aa6.89□□□□□ -1.31
SIK3-210ENST00000480468 NKAPP1Q8N9T2 125 aa6.89□□□□□ -1.31
SIK3-210ENST00000480468 C16orf90A8MZG2 172 aa6.89□□□□□ -1.31
SIK3-210ENST00000480468 KRTAP4-16G5E9R7 235 aaPredicted RBP6.89□□□□□ -1.31
SIK3-210ENST00000480468 CHKB-CPT1BH3BT56 60 aa6.89□□□□□ -1.31
SIK3-210ENST00000480468 C7orf33Q8WU49 177 aa6.89□□□□□ -1.31
SIK3-210ENST00000480468 LINC00208Q96KT6 92 aa6.89□□□□□ -1.31
SIK3-210ENST00000480468 NBEAL2Q6ZNJ1 2754 aa6.88□□□□□ -1.31
SIK3-210ENST00000480468 RETNQ9HD89 108 aa6.88□□□□□ -1.31
SIK3-210ENST00000480468 PIEZO1Q92508 2521 aa6.88□□□□□ -1.31
SIK3-210ENST00000480468 A8MU10 97 aa6.88□□□□□ -1.31
SIK3-210ENST00000480468 NDUFS5O43920 106 aa6.88□□□□□ -1.31
SIK3-210ENST00000480468 PLA2G2DQ9UNK4 145 aa6.88□□□□□ -1.31
SIK3-210ENST00000480468 NF1P21359 2839 aa6.87□□□□□ -1.31
SIK3-210ENST00000480468 SPRR1AP35321 89 aa6.87□□□□□ -1.31
SIK3-210ENST00000480468 Q75L30 129 aa6.87□□□□□ -1.31
SIK3-210ENST00000480468 NAV2Q8IVL1 2488 aa6.87□□□□□ -1.31
SIK3-210ENST00000480468 CHD8Q9HCK8 2581 aa6.86□□□□□ -1.31
SIK3-210ENST00000480468 LOC101927531A0A1B0GV80 90 aa6.86□□□□□ -1.31
SIK3-210ENST00000480468 DEFB4AO15263 64 aa6.86□□□□□ -1.31
SIK3-210ENST00000480468 RBM12B-AS1Q9P1G2 102 aa6.86□□□□□ -1.31
SIK3-210ENST00000480468 DEFB113Q30KQ7 82 aa6.85□□□□□ -1.31
SIK3-210ENST00000480468 PHF5AQ7RTV0 110 aaKnown RBP6.85□□□□□ -1.31
SIK3-210ENST00000480468 CUBNO60494 3623 aa6.85□□□□□ -1.31
SIK3-210ENST00000480468 SPART-AS1P0CW21 52 aa6.85□□□□□ -1.31
SIK3-210ENST00000480468 DEFB135Q30KP9 77 aa6.85□□□□□ -1.31
SIK3-210ENST00000480468 SERTAD4-AS1Q5TG53 156 aa6.85□□□□□ -1.31
SIK3-210ENST00000480468 Q8NAQ8 132 aa6.85□□□□□ -1.31
SIK3-210ENST00000480468 PRR15LQ9BU68 103 aa6.85□□□□□ -1.31
SIK3-210ENST00000480468 SETD2Q9BYW2 2564 aaPredicted RBP6.85□□□□□ -1.31
SIK3-210ENST00000480468 IGLV5-37A0A075B6J1 123 aa6.84□□□□□ -1.31
SIK3-210ENST00000480468 IGKV2D-24A0A075B6R9 120 aa6.84□□□□□ -1.31
SIK3-210ENST00000480468 KRTAP29-1A8MX34 341 aaPredicted RBP6.84□□□□□ -1.32
SIK3-210ENST00000480468 A6NN06 94 aa6.83□□□□□ -1.32
SIK3-210ENST00000480468 APOC4P55056 127 aa6.83□□□□□ -1.32
SIK3-210ENST00000480468 ACACBO00763 2458 aa6.83□□□□□ -1.32
SIK3-210ENST00000480468 IGLV1-50A0A075B6I6 118 aa6.82□□□□□ -1.32
SIK3-210ENST00000480468 TLX1NBP0CAT3 122 aa6.82□□□□□ -1.32
SIK3-210ENST00000480468 LCA10Q71F78 164 aa6.82□□□□□ -1.32
SIK3-210ENST00000480468 HTN3P15516 51 aa6.82□□□□□ -1.32
SIK3-210ENST00000480468 H0Y9P7 68 aa6.81□□□□□ -1.32
SIK3-210ENST00000480468 WFDC13Q8IUB5 93 aa6.81□□□□□ -1.32
SIK3-210ENST00000480468 C9orf163Q8N9P6 203 aa6.81□□□□□ -1.32
SIK3-210ENST00000480468 SONP18583 2426 aaKnown RBP6.81□□□□□ -1.32
SIK3-210ENST00000480468 PRB2P02812 416 aaPredicted RBP6.81□□□□□ -1.32
SIK3-210ENST00000480468 WFDC10BQ8IUB3 73 aa6.8□□□□□ -1.32
SIK3-210ENST00000480468 KRTAP1-3Q8IUG1 177 aa6.8□□□□□ -1.32
SIK3-210ENST00000480468 LINC00476Q8WZB0 136 aa6.8□□□□□ -1.32
SIK3-210ENST00000480468 CDC42SE1Q9NRR8 79 aa6.8□□□□□ -1.32
SIK3-210ENST00000480468 MYO18BQ8IUG5 2567 aa6.8□□□□□ -1.32
SIK3-210ENST00000480468 SPTSSBQ8NFR3 76 aa6.8□□□□□ -1.32
SIK3-210ENST00000480468 SPTBN4Q9H254 2564 aa6.79□□□□□ -1.32
SIK3-210ENST00000480468 H3BNG1 76 aa6.79□□□□□ -1.32
SIK3-210ENST00000480468 CENPEQ02224 2701 aa6.79□□□□□ -1.32
SIK3-210ENST00000480468 IGLV8-61A0A075B6I0 122 aa6.78□□□□□ -1.32
SIK3-210ENST00000480468 A6NED7 52 aa6.78□□□□□ -1.32
SIK3-210ENST00000480468 KRTAP10-9P60411 292 aa6.78□□□□□ -1.32
SIK3-210ENST00000480468 PKD1L2Q7Z442 2459 aa6.78□□□□□ -1.32
SIK3-210ENST00000480468 RPL37AP8A6NKH3 93 aa6.77□□□□□ -1.33
SIK3-210ENST00000480468 IGFL1Q6UW32 110 aa6.77□□□□□ -1.33
SIK3-210ENST00000480468 IGLV7-46A0A075B6I9 117 aa6.76□□□□□ -1.33
SIK3-210ENST00000480468 CASC2Q6XLA1 102 aa6.76□□□□□ -1.33
SIK3-210ENST00000480468 C7orf65Q6ZTY9 151 aa6.76□□□□□ -1.33
SIK3-210ENST00000480468 COA5Q86WW8 74 aa6.76□□□□□ -1.33
SIK3-210ENST00000480468 DEFB116Q30KQ4 102 aa6.76□□□□□ -1.33
SIK3-210ENST00000480468 ABCA12Q86UK0 2595 aa6.76□□□□□ -1.33
SIK3-210ENST00000480468 ITPR3Q14573 2671 aa6.75□□□□□ -1.33
SIK3-210ENST00000480468 PLAC8Q9NZF1 115 aa6.74□□□□□ -1.33
SIK3-210ENST00000480468 LINC01558Q9Y6Z2 57 aa6.74□□□□□ -1.33
SIK3-210ENST00000480468 HIVEP2P31629 2446 aa6.74□□□□□ -1.33
SIK3-210ENST00000480468 FAM208BQ5VWN6 2430 aa6.74□□□□□ -1.33
SIK3-210ENST00000480468 A0A087WSZ3 146 aa6.73□□□□□ -1.33
SIK3-210ENST00000480468 LINC01556Q5JQF7 62 aa6.73□□□□□ -1.33
SIK3-210ENST00000480468 CNBPP62633 177 aaKnown RBP6.73□□□□□ -1.33
SIK3-210ENST00000480468 ANK3Q12955 4377 aaKnown RBP6.73□□□□□ -1.33
SIK3-210ENST00000480468 KRTAP7-1Q8IUC3 87 aa6.72□□□□□ -1.33
SIK3-210ENST00000480468 FAM168BA1KXE4 195 aa6.72□□□□□ -1.33
SIK3-210ENST00000480468 A8MWP4 228 aa6.72□□□□□ -1.33
SIK3-210ENST00000480468 KRTAP10-3P60369 221 aa6.7□□□□□ -1.34
SIK3-210ENST00000480468 RPL37AP61513 92 aaKnown RBP6.7□□□□□ -1.34
SIK3-210ENST00000480468 REG3GQ6UW15 175 aa6.7□□□□□ -1.34
SIK3-210ENST00000480468 IGSF10Q6WRI0 2623 aa6.7□□□□□ -1.34
SIK3-210ENST00000480468 MOBPQ13875 183 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms