RNA–Protein interactions for RNA: ENST00000479014.1

CROT-206, Transcript of carnitine O-octanoyltransferase, humanhuman

TSL 2

Gene CROT, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROT-206ENST00000479014 LINC00643Q86TS7 51 aa-0.45□□□□□ -2.48
CROT-206ENST00000479014 SRRM2Q9UQ35 2752 aaKnown RBP-0.45□□□□□ -2.48
CROT-206ENST00000479014 COL6A3P12111 3177 aa-0.45□□□□□ -2.48
CROT-206ENST00000479014 LAMA5O15230 3695 aa-0.46□□□□□ -2.48
CROT-206ENST00000479014 LRRC9Q6ZRR7 1453 aa-0.46□□□□□ -2.48
CROT-206ENST00000479014 ACYP1P07311 99 aa-0.46□□□□□ -2.48
CROT-206ENST00000479014 WFDC13Q8IUB5 93 aa-0.46□□□□□ -2.48
CROT-206ENST00000479014 KRTAP19-7Q3SYF9 63 aa-0.47□□□□□ -2.48
CROT-206ENST00000479014 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.47□□□□□ -2.487e-8■■■□□ 16.4
CROT-206ENST00000479014 HYDINQ4G0P3 5121 aa-0.48□□□□□ -2.49
CROT-206ENST00000479014 LRRC7Q96NW7 1537 aa-0.48□□□□□ -2.49
CROT-206ENST00000479014 PCNX1Q96RV3 2341 aa-0.49□□□□□ -2.49
CROT-206ENST00000479014 RGPD8O14715 1765 aaPredicted RBP-0.49□□□□□ -2.49
CROT-206ENST00000479014 RGPD5Q99666 1765 aa-0.49□□□□□ -2.49
CROT-206ENST00000479014 KRTAP20-2Q3LI61 65 aa-0.49□□□□□ -2.49
CROT-206ENST00000479014 RGPD3A6NKT7 1758 aaPredicted RBP-0.5□□□□□ -2.49
CROT-206ENST00000479014 NDUFB1O75438 58 aa-0.5□□□□□ -2.49
CROT-206ENST00000479014 USH2AO75445 5202 aa-0.51□□□□□ -2.49
CROT-206ENST00000479014 RYR1P21817 5038 aa-0.51□□□□□ -2.49
CROT-206ENST00000479014 MAP1AP78559 2803 aaPredicted RBP-0.51□□□□□ -2.49
CROT-206ENST00000479014 CEBPZOSA8MTT3 80 aa-0.52□□□□□ -2.49
CROT-206ENST00000479014 RGPD2P0DJD1 1756 aa-0.52□□□□□ -2.49
CROT-206ENST00000479014 UBR1Q8IWV7 1749 aa-0.52□□□□□ -2.49
CROT-206ENST00000479014 PREX1Q8TCU6 1659 aa-0.53□□□□□ -2.49
CROT-206ENST00000479014 UBR4Q5T4S7 5183 aa-0.53□□□□□ -2.49
CROT-206ENST00000479014 MT4P47944 62 aa-0.53□□□□□ -2.49
CROT-206ENST00000479014 LELP1Q5T871 98 aa-0.53□□□□□ -2.49
CROT-206ENST00000479014 TRAV21A0A0B4J279 112 aa-0.54□□□□□ -2.5
CROT-206ENST00000479014 KIAA1109Q2LD37 5005 aa-0.54□□□□□ -2.5
CROT-206ENST00000479014 LRP1BQ9NZR2 4599 aa-0.54□□□□□ -2.5
CROT-206ENST00000479014 STARD9Q9P2P6 4700 aa-0.55□□□□□ -2.5
CROT-206ENST00000479014 KANTRA0A1W2PQU2 76 aa-0.55□□□□□ -2.5
CROT-206ENST00000479014 KRTAP19-8Q3LI54 63 aa-0.55□□□□□ -2.5
CROT-206ENST00000479014 STAB2Q8WWQ8 2551 aa-0.55□□□□□ -2.5
CROT-206ENST00000479014 KNL1Q8NG31 2342 aa-0.56□□□□□ -2.5
CROT-206ENST00000479014 PDZD2O15018 2839 aa-0.56□□□□□ -2.5
CROT-206ENST00000479014 WFDC9Q8NEX5 89 aa-0.56□□□□□ -2.5
CROT-206ENST00000479014 DOPEY1Q5JWR5 2465 aa-0.57□□□□□ -2.5
CROT-206ENST00000479014 NBEAL1Q6ZS30 2694 aa-0.57□□□□□ -2.5
CROT-206ENST00000479014 EPPK1P58107 5090 aaKnown RBP-0.58□□□□□ -2.5
CROT-206ENST00000479014 GNG2P59768 71 aa-0.58□□□□□ -2.5
CROT-206ENST00000479014 UACAQ9BZF9 1416 aa-0.58□□□□□ -2.5
CROT-206ENST00000479014 RGPD1P0DJD0 1748 aa-0.58□□□□□ -2.5
CROT-206ENST00000479014 CREBBPQ92793 2442 aa-0.59□□□□□ -2.5
CROT-206ENST00000479014 RYR2Q92736 4967 aa-0.6□□□□□ -2.51
CROT-206ENST00000479014 SPRR2AP35326 72 aa-0.6□□□□□ -2.51
CROT-206ENST00000479014 NF1P21359 2839 aa-0.6□□□□□ -2.51
CROT-206ENST00000479014 MAP3K4Q9Y6R4 1608 aa-0.6□□□□□ -2.51
CROT-206ENST00000479014 H0YGG7 62 aa-0.61□□□□□ -2.51
CROT-206ENST00000479014 PPLO60437 1756 aa-0.61□□□□□ -2.51
CROT-206ENST00000479014 RNF213Q63HN8 5207 aa-0.61□□□□□ -2.51
CROT-206ENST00000479014 FLGP20930 4061 aaPredicted RBP-0.62□□□□□ -2.51
CROT-206ENST00000479014 URB2Q14146 1524 aaKnown RBP-0.62□□□□□ -2.51
CROT-206ENST00000479014 KIF14Q15058 1648 aa-0.62□□□□□ -2.51
CROT-206ENST00000479014 CICQ96RK0 1608 aaPredicted RBP-0.62□□□□□ -2.51
CROT-206ENST00000479014 PTPN23Q9H3S7 1636 aa-0.62□□□□□ -2.51
CROT-206ENST00000479014 NDUFA3O95167 84 aa-0.62□□□□□ -2.51
CROT-206ENST00000479014 SUPT6HQ7KZ85 1726 aaKnown RBP-0.62□□□□□ -2.51
CROT-206ENST00000479014 HIVEP1P15822 2718 aa-0.62□□□□□ -2.51
CROT-206ENST00000479014 BIRC6Q9NR09 4857 aa-0.63□□□□□ -2.51
CROT-206ENST00000479014 TIAM2Q8IVF5 1701 aa-0.63□□□□□ -2.51
CROT-206ENST00000479014 REV3LO60673 3130 aa-0.64□□□□□ -2.51
CROT-206ENST00000479014 SETD2Q9BYW2 2564 aaPredicted RBP-0.64□□□□□ -2.51
CROT-206ENST00000479014 C3orf79P0CE67 100 aa-0.65□□□□□ -2.51
CROT-206ENST00000479014 ADAMTS12P58397 1594 aa-0.66□□□□□ -2.51
CROT-206ENST00000479014 LTN1O94822 1766 aa-0.66□□□□□ -2.52
CROT-206ENST00000479014 SONP18583 2426 aaKnown RBP-0.66□□□□□ -2.52
CROT-206ENST00000479014 PKHD1P08F94 4074 aa-0.67□□□□□ -2.52
CROT-206ENST00000479014 NBPF19A0A087WUL8 3843 aa-0.67□□□□□ -2.52
CROT-206ENST00000479014 TMEM131LA2VDJ0 1609 aa-0.67□□□□□ -2.52
CROT-206ENST00000479014 NBASA2RRP1 2371 aa-0.67□□□□□ -2.52
CROT-206ENST00000479014 TDRG1Q3Y452 100 aa-0.68□□□□□ -2.52
CROT-206ENST00000479014 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.68□□□□□ -2.52
CROT-206ENST00000479014 PDE4DIPQ5VU43 2346 aa-0.69□□□□□ -2.52
CROT-206ENST00000479014 USP32Q8NFA0 1604 aa-0.69□□□□□ -2.52
CROT-206ENST00000479014 POLR1AO95602 1720 aaPredicted RBP-0.69□□□□□ -2.52
CROT-206ENST00000479014 PKHD1L1Q86WI1 4243 aa-0.7□□□□□ -2.52
CROT-206ENST00000479014 NCOA2Q15596 1464 aa-0.7□□□□□ -2.52
CROT-206ENST00000479014 MUC17Q685J3 4493 aa-0.7□□□□□ -2.52
CROT-206ENST00000479014 HECTD1Q9ULT8 2610 aa-0.7□□□□□ -2.52
CROT-206ENST00000479014 DNHD1Q96M86 4753 aa-0.71□□□□□ -2.52
CROT-206ENST00000479014 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.71□□□□□ -2.52
CROT-206ENST00000479014 LAMA2P24043 3122 aaKnown RBP-0.71□□□□□ -2.52
CROT-206ENST00000479014 HMGA1P17096 107 aaKnown RBP-0.71□□□□□ -2.52
CROT-206ENST00000479014 IFI27P40305 119 aaPredicted RBP-0.71□□□□□ -2.52
CROT-206ENST00000479014 PRO3102Q9H379 93 aa-0.71□□□□□ -2.52
CROT-206ENST00000479014 DNAH3Q8TD57 4116 aa-0.71□□□□□ -2.52
CROT-206ENST00000479014 SVEP1Q4LDE5 3571 aa-0.71□□□□□ -2.52
CROT-206ENST00000479014 DNAH6Q9C0G6 4158 aa-0.71□□□□□ -2.52
CROT-206ENST00000479014 TEP1Q99973 2627 aaKnown RBP-0.72□□□□□ -2.52
CROT-206ENST00000479014 UMAD1C9J7I0 102 aa-0.72□□□□□ -2.52
CROT-206ENST00000479014 ATP5EP2Q5VTU8 51 aa-0.72□□□□□ -2.52
CROT-206ENST00000479014 CCDC88BA6NC98 1476 aa-0.73□□□□□ -2.53
CROT-206ENST00000479014 USP9YO00507 2555 aaPredicted RBP-0.73□□□□□ -2.53
CROT-206ENST00000479014 NWD1Q149M9 1564 aa-0.73□□□□□ -2.53
CROT-206ENST00000479014 ABCA13Q86UQ4 5058 aa-0.73□□□□□ -2.53
CROT-206ENST00000479014 DNAH2Q9P225 4427 aa-0.73□□□□□ -2.53
CROT-206ENST00000479014 ITPR3Q14573 2671 aa-0.73□□□□□ -2.53
CROT-206ENST00000479014 KRTAP6-2Q3LI66 62 aa-0.73□□□□□ -2.53
CROT-206ENST00000479014 S100A13Q99584 98 aa-0.73□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms