RNA–Protein interactions for RNA: ENST00000479014.1

CROT-206, Transcript of carnitine O-octanoyltransferase, humanhuman

TSL 2

Gene CROT, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROT-206ENST00000479014 AEBP2Q6ZN18 517 aaPredicted RBP25.5■■□□□ 1.67
CROT-206ENST00000479014 CHIC1Q5VXU3 224 aa24.27■■□□□ 1.48
CROT-206ENST00000479014 SENP3Q9H4L4 574 aaPredicted RBP21.57■■□□□ 1.04
CROT-206ENST00000479014 PHF23Q9BUL5 403 aaPredicted RBP21.38■■□□□ 1.01
CROT-206ENST00000479014 FOXD1Q16676 465 aa20.19■□□□□ 0.82
CROT-206ENST00000479014 PLPPR3Q6T4P5 718 aa19.58■□□□□ 0.72
CROT-206ENST00000479014 PPP6R1Q9UPN7 881 aa19.05■□□□□ 0.64
CROT-206ENST00000479014 ADRA2BP18089 450 aa19■□□□□ 0.63
CROT-206ENST00000479014 PIAS4Q8N2W9 510 aaPredicted RBP18.9■□□□□ 0.62
CROT-206ENST00000479014 MSH5O43196 834 aa18.71■□□□□ 0.59
CROT-206ENST00000479014 POTEDQ86YR6 584 aa18.12■□□□□ 0.49
CROT-206ENST00000479014 KCNA4P22459 653 aa17.51■□□□□ 0.39
CROT-206ENST00000479014 MAPK8IP2Q13387 824 aaPredicted RBP17.42■□□□□ 0.38
CROT-206ENST00000479014 PPP4R3CPQ6ZMV5 832 aa17.24■□□□□ 0.35
CROT-206ENST00000479014 SCAF1Q9H7N4 1312 aaKnown RBP17.17■□□□□ 0.34
CROT-206ENST00000479014 DMRT2Q9Y5R5 561 aa17.16■□□□□ 0.34
CROT-206ENST00000479014 NCBP3Q53F19 620 aaKnown RBP17.14■□□□□ 0.33
CROT-206ENST00000479014 EHMT2Q96KQ7 1210 aa17.03■□□□□ 0.32
CROT-206ENST00000479014 SLC4A1APQ9BWU0 796 aaKnown RBP16.88■□□□□ 0.29
CROT-206ENST00000479014 NPM3O75607 178 aaKnown RBP16.71■□□□□ 0.27
CROT-206ENST00000479014 CNKSR2Q8WXI2 1034 aa16.7■□□□□ 0.26
CROT-206ENST00000479014 HOXD11P31277 338 aaPredicted RBP16.58■□□□□ 0.24
CROT-206ENST00000479014 CSRNP3Q8WYN3 585 aa16.55■□□□□ 0.24
CROT-206ENST00000479014 DCAF8L1A6NGE4 600 aa16.53■□□□□ 0.24
CROT-206ENST00000479014 RNF216Q9NWF9 866 aaPredicted RBP16.48■□□□□ 0.23
CROT-206ENST00000479014 DNAJC5BQ9UF47 199 aa16.32■□□□□ 0.2
CROT-206ENST00000479014 FOXD4L1Q9NU39 408 aa16.06■□□□□ 0.16
CROT-206ENST00000479014 ZBTB22O15209 634 aa16.05■□□□□ 0.16
CROT-206ENST00000479014 RNF39Q9H2S5 420 aa16.04■□□□□ 0.16
CROT-206ENST00000479014 CACNB1Q02641 598 aaPredicted RBP16.03■□□□□ 0.16
CROT-206ENST00000479014 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.82■□□□□ 0.12
CROT-206ENST00000479014 C1QBPQ07021 282 aaKnown RBP15.74■□□□□ 0.11
CROT-206ENST00000479014 SLC4A2P04920 1241 aa15.57■□□□□ 0.08
CROT-206ENST00000479014 U3KPZ7 1027 aaPredicted RBP15.57■□□□□ 0.08
CROT-206ENST00000479014 MYCNP04198 464 aaPredicted RBP15.55■□□□□ 0.08
CROT-206ENST00000479014 ATXN8OSP0DMR3 200 aa15.53■□□□□ 0.08
CROT-206ENST00000479014 SPINK5Q9NQ38 1064 aaPredicted RBP15.33■□□□□ 0.04
CROT-206ENST00000479014 CAPN15O75808 1086 aa15.24■□□□□ 0.03
CROT-206ENST00000479014 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.23■□□□□ 0.03
CROT-206ENST00000479014 HNRNPUL2Q1KMD3 747 aaKnown RBP15.23■□□□□ 0.03
CROT-206ENST00000479014 SAMD1Q6SPF0 538 aaPredicted RBP15.15■□□□□ 0.02
CROT-206ENST00000479014 DSG3P32926 999 aa15.1■□□□□ 0.01
CROT-206ENST00000479014 TRHP20396 242 aaPredicted RBP15.06■□□□□ 0
CROT-206ENST00000479014 ABCB7O75027 752 aa14.98□□□□□ -0.01
CROT-206ENST00000479014 APLP2Q06481 763 aa14.98□□□□□ -0.01
CROT-206ENST00000479014 FKBP8Q14318 412 aa14.97□□□□□ -0.01
CROT-206ENST00000479014 ZNF219Q9P2Y4 722 aaPredicted RBP14.93□□□□□ -0.02
CROT-206ENST00000479014 AMER1Q5JTC6 1135 aaPredicted RBP14.92□□□□□ -0.02
CROT-206ENST00000479014 ATF5Q9Y2D1 282 aaPredicted RBP14.84□□□□□ -0.03
CROT-206ENST00000479014 RTN4Q9NQC3 1192 aaKnown RBP14.69□□□□□ -0.06
CROT-206ENST00000479014 POLA2Q14181 598 aa14.65□□□□□ -0.06
CROT-206ENST00000479014 FBLN2P98095 1184 aa14.45□□□□□ -0.1
CROT-206ENST00000479014 FBXO3Q9UK99 471 aa14.45□□□□□ -0.1
CROT-206ENST00000479014 SLC24A1O60721 1099 aa14.44□□□□□ -0.1
CROT-206ENST00000479014 SPDYE4A6NLX3 237 aa14.39□□□□□ -0.11
CROT-206ENST00000479014 ZBTB12Q9Y330 459 aaPredicted RBP14.31□□□□□ -0.12
CROT-206ENST00000479014 RBM42Q9BTD8 480 aaKnown RBP14.3□□□□□ -0.12
CROT-206ENST00000479014 MKRN4PQ13434 485 aaPredicted RBP14.29□□□□□ -0.12
CROT-206ENST00000479014 PROM2Q8N271 834 aa14.26□□□□□ -0.13
CROT-206ENST00000479014 OSCARQ8IYS5 282 aa14.24□□□□□ -0.13
CROT-206ENST00000479014 POTEHQ6S545 545 aa14.2□□□□□ -0.14
CROT-206ENST00000479014 VASPP50552 380 aaPredicted RBP14.11□□□□□ -0.15
CROT-206ENST00000479014 AKT1S1Q96B36 256 aa14.03□□□□□ -0.16
CROT-206ENST00000479014 CHRDL2Q6WN34 429 aa14.01□□□□□ -0.17
CROT-206ENST00000479014 REM2Q8IYK8 340 aaPredicted RBP13.96□□□□□ -0.17
CROT-206ENST00000479014 SPDYE2BA6NHP3 402 aa13.89□□□□□ -0.19
CROT-206ENST00000479014 SPDYE6P0CI01 402 aa13.89□□□□□ -0.19
CROT-206ENST00000479014 SPDYE2Q495Y8 402 aa13.89□□□□□ -0.19
CROT-206ENST00000479014 IFNLR1Q8IU57 520 aaPredicted RBP13.87□□□□□ -0.19
CROT-206ENST00000479014 PITPNM1O00562 1244 aa13.86□□□□□ -0.19
CROT-206ENST00000479014 STAG3Q9UJ98 1225 aa13.86□□□□□ -0.19
CROT-206ENST00000479014 ZNF692Q9BU19 519 aaPredicted RBP13.85□□□□□ -0.19
CROT-206ENST00000479014 SSUH2Q9Y2M2 353 aa13.79□□□□□ -0.2
CROT-206ENST00000479014 PIP4P2Q8N4L2 257 aa13.74□□□□□ -0.21
CROT-206ENST00000479014 SPOCK2Q92563 424 aa13.73□□□□□ -0.21
CROT-206ENST00000479014 KLHL34Q8N239 644 aa13.71□□□□□ -0.21
CROT-206ENST00000479014 PLCB2Q00722 1185 aa13.69□□□□□ -0.22
CROT-206ENST00000479014 PABPN1Q86U42 306 aaKnown RBP eCLIP13.67□□□□□ -0.22
CROT-206ENST00000479014 DCAF8L2P0C7V8 631 aa13.66□□□□□ -0.22
CROT-206ENST00000479014 PKD2Q13563 968 aa13.66□□□□□ -0.22
CROT-206ENST00000479014 PLCD3Q8N3E9 789 aa13.66□□□□□ -0.22
CROT-206ENST00000479014 CLEC11AQ9Y240 323 aa13.66□□□□□ -0.22
CROT-206ENST00000479014 PLEKHG5O94827 1062 aa13.64□□□□□ -0.23
CROT-206ENST00000479014 FXR2P51116 673 aaKnown RBP eCLIP13.64□□□□□ -0.23
CROT-206ENST00000479014 ZBTB47Q9UFB7 747 aaPredicted RBP13.62□□□□□ -0.23
CROT-206ENST00000479014 SPDYE1Q8NFV5 336 aaPredicted RBP13.59□□□□□ -0.23
CROT-206ENST00000479014 MIER1Q8N108 512 aa13.56□□□□□ -0.24
CROT-206ENST00000479014 ECM2O94769 699 aaPredicted RBP13.53□□□□□ -0.24
CROT-206ENST00000479014 PRKAR2AP13861 404 aaKnown RBP13.48□□□□□ -0.25
CROT-206ENST00000479014 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.47□□□□□ -0.25
CROT-206ENST00000479014 HAP1P54257 671 aaPredicted RBP13.45□□□□□ -0.26
CROT-206ENST00000479014 TRIM41Q8WV44 630 aa13.45□□□□□ -0.26
CROT-206ENST00000479014 CHADLQ6NUI6 762 aa13.44□□□□□ -0.26
CROT-206ENST00000479014 BBXQ8WY36 941 aaPredicted RBP13.43□□□□□ -0.26
CROT-206ENST00000479014 HAX1O00165 279 aa13.42□□□□□ -0.26
CROT-206ENST00000479014 PRR29P0C7W0 189 aa13.39□□□□□ -0.27
CROT-206ENST00000479014 EVX2Q03828 476 aa13.37□□□□□ -0.27
CROT-206ENST00000479014 SP7Q8TDD2 431 aaPredicted RBP13.37□□□□□ -0.27
CROT-206ENST00000479014 VSIG10Q8N0Z9 540 aa13.35□□□□□ -0.27
CROT-206ENST00000479014 CIZ1Q9ULV3 898 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms