RNA–Protein interactions for RNA: ENST00000477872.1

TMF1-202, Transcript of TATA element modulatory factor 1, humanhuman

TSL 3

Gene TMF1, Length 222 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-202ENST00000477872 VAMP8Q9BV40 100 aa-0.77□□□□□ -2.53
TMF1-202ENST00000477872 EIF4G3O43432 1585 aaKnown RBP-0.78□□□□□ -2.53
TMF1-202ENST00000477872 SPTBN5Q9NRC6 3674 aaKnown RBP-0.78□□□□□ -2.53
TMF1-202ENST00000477872 TMEM262E9PQX1 116 aa-0.78□□□□□ -2.53
TMF1-202ENST00000477872 KRTDAPP60985 99 aa-0.78□□□□□ -2.53
TMF1-202ENST00000477872 SVBPQ8N300 66 aa-0.78□□□□□ -2.53
TMF1-202ENST00000477872 TSC22D3Q99576 134 aa-0.78□□□□□ -2.53
TMF1-202ENST00000477872 SRCAPQ6ZRS2 3230 aa-0.78□□□□□ -2.53
TMF1-202ENST00000477872 SCN11AQ9UI33 1791 aa-0.78□□□□□ -2.53
TMF1-202ENST00000477872 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.78□□□□□ -2.53
TMF1-202ENST00000477872 ABCC2Q92887 1545 aa-0.79□□□□□ -2.54
TMF1-202ENST00000477872 PZPP20742 1482 aa-0.79□□□□□ -2.54
TMF1-202ENST00000477872 ANKRD50Q9ULJ7 1429 aa-0.79□□□□□ -2.54
TMF1-202ENST00000477872 TRBV25-1A0A075B6N4 114 aa-0.79□□□□□ -2.54
TMF1-202ENST00000477872 hADV29S1A0JD25 119 aa-0.79□□□□□ -2.54
TMF1-202ENST00000477872 SNAPC5O75971 98 aa-0.79□□□□□ -2.54
TMF1-202ENST00000477872 ASIPP42127 132 aa-0.79□□□□□ -2.54
TMF1-202ENST00000477872 GNG4P50150 75 aa-0.79□□□□□ -2.54
TMF1-202ENST00000477872 MT1HP80294 61 aa-0.79□□□□□ -2.54
TMF1-202ENST00000477872 S100A12P80511 92 aa-0.79□□□□□ -2.54
TMF1-202ENST00000477872 PSMG4Q5JS54 123 aa-0.79□□□□□ -2.54
TMF1-202ENST00000477872 ALKQ9UM73 1620 aa-0.79□□□□□ -2.54
TMF1-202ENST00000477872 MAP3K1Q13233 1512 aa-0.79□□□□□ -2.54
TMF1-202ENST00000477872 C5orf42Q9H799 3197 aa-0.8□□□□□ -2.54
TMF1-202ENST00000477872 MLH3Q9UHC1 1453 aa-0.8□□□□□ -2.54
TMF1-202ENST00000477872 COL12A1Q99715 3063 aa-0.8□□□□□ -2.54
TMF1-202ENST00000477872 ABCC5O15440 1437 aa-0.8□□□□□ -2.54
TMF1-202ENST00000477872 SUPT6HQ7KZ85 1726 aaKnown RBP-0.8□□□□□ -2.54
TMF1-202ENST00000477872 ACACBO00763 2458 aa-0.8□□□□□ -2.54
TMF1-202ENST00000477872 H7BZZ5 65 aa-0.8□□□□□ -2.54
TMF1-202ENST00000477872 PPP3R1P63098 170 aa-0.8□□□□□ -2.54
TMF1-202ENST00000477872 NMSQ5H8A3 153 aa-0.8□□□□□ -2.54
TMF1-202ENST00000477872 COX6B2Q6YFQ2 88 aa-0.8□□□□□ -2.54
TMF1-202ENST00000477872 CACFD1Q9UGQ2 172 aa-0.8□□□□□ -2.54
TMF1-202ENST00000477872 PRDM15P57071 1507 aaPredicted RBP-0.8□□□□□ -2.54
TMF1-202ENST00000477872 FAM135AQ9P2D6 1515 aa-0.8□□□□□ -2.54
TMF1-202ENST00000477872 MAGI2Q86UL8 1455 aa-0.8□□□□□ -2.54
TMF1-202ENST00000477872 RGPD1P0DJD0 1748 aa-0.81□□□□□ -2.54
TMF1-202ENST00000477872 PLXNC1O60486 1568 aa-0.81□□□□□ -2.54
TMF1-202ENST00000477872 CORTO00230 105 aa-0.81□□□□□ -2.54
TMF1-202ENST00000477872 NDUFC1O43677 76 aa-0.81□□□□□ -2.54
TMF1-202ENST00000477872 MPC2O95563 127 aa-0.81□□□□□ -2.54
TMF1-202ENST00000477872 PMCHL1Q16048 86 aa-0.81□□□□□ -2.54
TMF1-202ENST00000477872 PSENENQ9NZ42 101 aa-0.81□□□□□ -2.54
TMF1-202ENST00000477872 AP4S1Q9Y587 144 aa-0.81□□□□□ -2.54
TMF1-202ENST00000477872 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.81□□□□□ -2.54
TMF1-202ENST00000477872 NRXN1Q9ULB1 1477 aa-0.81□□□□□ -2.54
TMF1-202ENST00000477872 RAPGEF2Q9Y4G8 1499 aa-0.81□□□□□ -2.54
TMF1-202ENST00000477872 RIF1Q5UIP0 2472 aaKnown RBP-0.81□□□□□ -2.54
TMF1-202ENST00000477872 CLTCQ00610 1675 aaKnown RBP-0.81□□□□□ -2.54
TMF1-202ENST00000477872 DLEU1O43261 78 aa-0.82□□□□□ -2.54
TMF1-202ENST00000477872 NDUFA3O95167 84 aa-0.82□□□□□ -2.54
TMF1-202ENST00000477872 HMGN1P05114 100 aa-0.82□□□□□ -2.54
TMF1-202ENST00000477872 IGLC2P0DOY2 106 aa-0.82□□□□□ -2.54
TMF1-202ENST00000477872 IGLC3P0DOY3 106 aa-0.82□□□□□ -2.54
TMF1-202ENST00000477872 RPL13AP3Q6NVV1 102 aa-0.82□□□□□ -2.54
TMF1-202ENST00000477872 FAM107BQ9H098 131 aa-0.82□□□□□ -2.54
TMF1-202ENST00000477872 POLR1AO95602 1720 aaPredicted RBP-0.82□□□□□ -2.54
TMF1-202ENST00000477872 LRRC9Q6ZRR7 1453 aa-0.82□□□□□ -2.54
TMF1-202ENST00000477872 BPTFQ12830 3046 aa-0.82□□□□□ -2.54
TMF1-202ENST00000477872 NESP48681 1621 aa-0.82□□□□□ -2.54
TMF1-202ENST00000477872 CEP290O15078 2479 aa-0.82□□□□□ -2.54
TMF1-202ENST00000477872 WIZO95785 1651 aa-0.83□□□□□ -2.54
TMF1-202ENST00000477872 UQCRHP07919 91 aa-0.83□□□□□ -2.54
TMF1-202ENST00000477872 DEFA5Q01523 94 aa-0.83□□□□□ -2.54
TMF1-202ENST00000477872 TRGV9Q99603 122 aa-0.83□□□□□ -2.54
TMF1-202ENST00000477872 USP9XQ93008 2570 aaPredicted RBP-0.83□□□□□ -2.54
TMF1-202ENST00000477872 LTN1O94822 1766 aa-0.83□□□□□ -2.54
TMF1-202ENST00000477872 ZFYVE16Q7Z3T8 1539 aa-0.84□□□□□ -2.54
TMF1-202ENST00000477872 USP32Q8NFA0 1604 aa-0.84□□□□□ -2.54
TMF1-202ENST00000477872 A0A1B0GV90 55 aa-0.84□□□□□ -2.54
TMF1-202ENST00000477872 COX7BP24311 80 aa-0.84□□□□□ -2.54
TMF1-202ENST00000477872 HMGN3Q15651 99 aa-0.84□□□□□ -2.54
TMF1-202ENST00000477872 DNAH17Q9UFH2 4485 aa-0.84□□□□□ -2.54
TMF1-202ENST00000477872 CHD7Q9P2D1 2997 aa-0.84□□□□□ -2.54
TMF1-202ENST00000477872 GNGT2O14610 69 aa-0.85□□□□□ -2.55
TMF1-202ENST00000477872 S100A1P23297 94 aa-0.85□□□□□ -2.55
TMF1-202ENST00000477872 KRTAP19-5Q3LI72 72 aa-0.85□□□□□ -2.55
TMF1-202ENST00000477872 ALKAL2Q6UX46 152 aa-0.85□□□□□ -2.55
TMF1-202ENST00000477872 UBR1Q8IWV7 1749 aa-0.85□□□□□ -2.55
TMF1-202ENST00000477872 S4R3F8 94 aa-0.85□□□□□ -2.55
TMF1-202ENST00000477872 LRRC7Q96NW7 1537 aa-0.85□□□□□ -2.55
TMF1-202ENST00000477872 DOT1LQ8TEK3 1739 aa-0.86□□□□□ -2.55
TMF1-202ENST00000477872 TMEM218A2RU14 115 aa-0.86□□□□□ -2.55
TMF1-202ENST00000477872 EFCAB10A6NFE3 127 aa-0.86□□□□□ -2.55
TMF1-202ENST00000477872 D6R8Y8 96 aa-0.86□□□□□ -2.55
TMF1-202ENST00000477872 F8WEM9 126 aa-0.86□□□□□ -2.55
TMF1-202ENST00000477872 PRLHP81277 87 aa-0.86□□□□□ -2.55
TMF1-202ENST00000477872 ETDBQ3ZM63 59 aa-0.86□□□□□ -2.55
TMF1-202ENST00000477872 GTF2H5Q6ZYL4 71 aa-0.86□□□□□ -2.55
TMF1-202ENST00000477872 MUSTN1Q8IVN3 82 aa-0.86□□□□□ -2.55
TMF1-202ENST00000477872 SERP2Q8N6R1 65 aa-0.86□□□□□ -2.55
TMF1-202ENST00000477872 UBE2D4Q9Y2X8 147 aa-0.86□□□□□ -2.55
TMF1-202ENST00000477872 EPRSP07814 1512 aaKnown RBP-0.86□□□□□ -2.55
TMF1-202ENST00000477872 ANKRD36BQ8N2N9 1353 aa-0.86□□□□□ -2.55
TMF1-202ENST00000477872 DEPDC5O75140 1603 aa-0.86□□□□□ -2.55
TMF1-202ENST00000477872 TLN2Q9Y4G6 2542 aa-0.86□□□□□ -2.55
TMF1-202ENST00000477872 ITPR1Q14643 2758 aa-0.86□□□□□ -2.55
TMF1-202ENST00000477872 NWD1Q149M9 1564 aa-0.87□□□□□ -2.55
TMF1-202ENST00000477872 CSMD1Q96PZ7 3565 aa-0.87□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms