RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 LYNX1G3V0Z9 82 aa0.51□□□□□ -2.33
TARDBP-208ENST00000477447 H0YAA0 97 aa0.51□□□□□ -2.33
TARDBP-208ENST00000477447 MRPL33O75394 65 aaKnown RBP0.51□□□□□ -2.33
TARDBP-208ENST00000477447 COX6A2Q02221 97 aa0.51□□□□□ -2.33
TARDBP-208ENST00000477447 PDCD11Q14690 1871 aaKnown RBP0.51□□□□□ -2.33
TARDBP-208ENST00000477447 MYO7BQ6PIF6 2116 aa0.51□□□□□ -2.33
TARDBP-208ENST00000477447 BCORQ6W2J9 1755 aa0.51□□□□□ -2.33
TARDBP-208ENST00000477447 COX6B2Q6YFQ2 88 aa0.51□□□□□ -2.33
TARDBP-208ENST00000477447 SAMD9LQ8IVG5 1584 aa0.51□□□□□ -2.33
TARDBP-208ENST00000477447 Q8IZM0 81 aa0.51□□□□□ -2.33
TARDBP-208ENST00000477447 MRPL34Q9BQ48 92 aaKnown RBP0.51□□□□□ -2.33
TARDBP-208ENST00000477447 PRO3102Q9H379 93 aa0.51□□□□□ -2.33
TARDBP-208ENST00000477447 CDKN2A-AS1Q9UH64 79 aa0.51□□□□□ -2.33
TARDBP-208ENST00000477447 CEP192Q8TEP8 1941 aa0.5□□□□□ -2.33
TARDBP-208ENST00000477447 KIF21BO75037 1637 aa0.5□□□□□ -2.33
TARDBP-208ENST00000477447 H0YGX0 51 aa0.5□□□□□ -2.33
TARDBP-208ENST00000477447 SPINK4O60575 86 aa0.5□□□□□ -2.33
TARDBP-208ENST00000477447 NDUFA3O95167 84 aa0.5□□□□□ -2.33
TARDBP-208ENST00000477447 LINC00158P58513 81 aa0.5□□□□□ -2.33
TARDBP-208ENST00000477447 SNRPGP62308 76 aaKnown RBP0.5□□□□□ -2.33
TARDBP-208ENST00000477447 LELP1Q5T871 98 aa0.5□□□□□ -2.33
TARDBP-208ENST00000477447 KRTAP19-3Q7Z4W3 81 aa0.5□□□□□ -2.33
TARDBP-208ENST00000477447 CNFNQ9BYD5 112 aa0.5□□□□□ -2.33
TARDBP-208ENST00000477447 DNAJC13O75165 2243 aa0.5□□□□□ -2.33
TARDBP-208ENST00000477447 DOCK11Q5JSL3 2073 aa0.49□□□□□ -2.33
TARDBP-208ENST00000477447 FXYD6P3P58550 94 aa0.49□□□□□ -2.33
TARDBP-208ENST00000477447 USMG5Q96IX5 58 aa0.49□□□□□ -2.33
TARDBP-208ENST00000477447 UBR3Q6ZT12 1888 aa0.49□□□□□ -2.33
TARDBP-208ENST00000477447 TSC2P49815 1807 aa0.49□□□□□ -2.33
TARDBP-208ENST00000477447 HEATR1Q9H583 2144 aaKnown RBP0.49□□□□□ -2.33
TARDBP-208ENST00000477447 TENM3Q9P273 2699 aa0.48□□□□□ -2.33
TARDBP-208ENST00000477447 F5P12259 2224 aa0.48□□□□□ -2.33
TARDBP-208ENST00000477447 COL14A1Q05707 1796 aaKnown RBP0.48□□□□□ -2.33
TARDBP-208ENST00000477447 QSER1Q2KHR3 1735 aa0.48□□□□□ -2.33
TARDBP-208ENST00000477447 A0A0D9SG42 100 aa0.48□□□□□ -2.33
TARDBP-208ENST00000477447 SPRR1AP35321 89 aa0.48□□□□□ -2.33
TARDBP-208ENST00000477447 ESPL1Q14674 2120 aa0.48□□□□□ -2.33
TARDBP-208ENST00000477447 PIGYQ3MUY2 71 aa0.48□□□□□ -2.33
TARDBP-208ENST00000477447 Q5VSD8 79 aa0.48□□□□□ -2.33
TARDBP-208ENST00000477447 LINC00308Q8TCZ7 52 aa0.48□□□□□ -2.33
TARDBP-208ENST00000477447 REV3LO60673 3130 aa0.47□□□□□ -2.33
TARDBP-208ENST00000477447 TOGARAM1Q9Y4F4 1720 aa0.47□□□□□ -2.33
TARDBP-208ENST00000477447 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.47□□□□□ -2.331e-41■■■■■ 46.1
TARDBP-208ENST00000477447 CCL22O00626 93 aa0.47□□□□□ -2.33
TARDBP-208ENST00000477447 SPINK9Q5DT21 86 aa0.47□□□□□ -2.33
TARDBP-208ENST00000477447 TMEM167BQ9NRX6 74 aa0.47□□□□□ -2.33
TARDBP-208ENST00000477447 PRO0255Q9UI72 69 aa0.47□□□□□ -2.33
TARDBP-208ENST00000477447 TIMM8BQ9Y5J9 83 aaPredicted RBP0.47□□□□□ -2.33
TARDBP-208ENST00000477447 FAM208BQ5VWN6 2430 aa0.47□□□□□ -2.33
TARDBP-208ENST00000477447 MEGF8Q7Z7M0 2845 aa0.46□□□□□ -2.34
TARDBP-208ENST00000477447 DUOX1Q9NRD9 1551 aa0.46□□□□□ -2.34
TARDBP-208ENST00000477447 RPS27P42677 84 aaKnown RBP0.46□□□□□ -2.34
TARDBP-208ENST00000477447 TFF3Q07654 80 aa0.46□□□□□ -2.34
TARDBP-208ENST00000477447 H1FX-AS1Q4G0G2 97 aa0.46□□□□□ -2.34
TARDBP-208ENST00000477447 RPS27LQ71UM5 84 aaKnown RBP0.46□□□□□ -2.34
TARDBP-208ENST00000477447 ABCA1O95477 2261 aa0.46□□□□□ -2.34
TARDBP-208ENST00000477447 PIEZO1Q92508 2521 aa0.46□□□□□ -2.34
TARDBP-208ENST00000477447 ASXL3Q9C0F0 2248 aa0.46□□□□□ -2.34
TARDBP-208ENST00000477447 DDX60LQ5H9U9 1706 aaKnown RBP0.46□□□□□ -2.34
TARDBP-208ENST00000477447 AHNAKQ09666 5890 aaKnown RBP0.46□□□□□ -2.34
TARDBP-208ENST00000477447 IQGAP1P46940 1657 aa0.46□□□□□ -2.34
TARDBP-208ENST00000477447 TNRC6CQ9HCJ0 1690 aaKnown RBP0.46□□□□□ -2.34
TARDBP-208ENST00000477447 SPTBP11277 2137 aa0.46□□□□□ -2.34
TARDBP-208ENST00000477447 PLXNB2O15031 1838 aa0.45□□□□□ -2.34
TARDBP-208ENST00000477447 MROH2BQ7Z745 1585 aa0.45□□□□□ -2.34
TARDBP-208ENST00000477447 ALMS1Q8TCU4 4167 aa0.45□□□□□ -2.34
TARDBP-208ENST00000477447 C4AP0C0L4 1744 aa0.45□□□□□ -2.34
TARDBP-208ENST00000477447 NDUFA1O15239 70 aa0.45□□□□□ -2.34
TARDBP-208ENST00000477447 DEFB130BP0DP73 79 aa0.45□□□□□ -2.34
TARDBP-208ENST00000477447 DEFB130AP0DP74 79 aa0.45□□□□□ -2.34
TARDBP-208ENST00000477447 IAPPP10997 89 aa0.45□□□□□ -2.34
TARDBP-208ENST00000477447 SPRR1BP22528 89 aa0.45□□□□□ -2.34
TARDBP-208ENST00000477447 MINOS1Q5TGZ0 78 aa0.45□□□□□ -2.34
TARDBP-208ENST00000477447 SMIM2Q9BVW6 85 aa0.45□□□□□ -2.34
TARDBP-208ENST00000477447 C6orf48Q9UBA6 75 aa0.45□□□□□ -2.34
TARDBP-208ENST00000477447 CNTRLQ7Z7A1 2325 aa0.45□□□□□ -2.34
TARDBP-208ENST00000477447 ANK2Q01484 3957 aa0.45□□□□□ -2.34
TARDBP-208ENST00000477447 MED13LQ71F56 2210 aa0.45□□□□□ -2.34
TARDBP-208ENST00000477447 CELSR2Q9HCU4 2923 aa0.44□□□□□ -2.34
TARDBP-208ENST00000477447 CACNA1EQ15878 2313 aa0.44□□□□□ -2.34
TARDBP-208ENST00000477447 CDC42BPAQ5VT25 1732 aa0.44□□□□□ -2.34
TARDBP-208ENST00000477447 NINQ8N4C6 2090 aa0.44□□□□□ -2.34
TARDBP-208ENST00000477447 LMO7Q8WWI1 1683 aa0.44□□□□□ -2.34
TARDBP-208ENST00000477447 TRANK1O15050 2925 aa0.44□□□□□ -2.34
TARDBP-208ENST00000477447 WFDC13Q8IUB5 93 aa0.44□□□□□ -2.34
TARDBP-208ENST00000477447 DEFB105AQ8NG35 78 aa0.44□□□□□ -2.34
TARDBP-208ENST00000477447 CSMD3Q7Z407 3707 aa0.44□□□□□ -2.34
TARDBP-208ENST00000477447 AKAP13Q12802 2813 aa0.44□□□□□ -2.34
TARDBP-208ENST00000477447 ANKRD36A6QL64 1941 aa0.44□□□□□ -2.34
TARDBP-208ENST00000477447 ASH1LQ9NR48 2969 aaKnown RBP0.44□□□□□ -2.34
TARDBP-208ENST00000477447 C4BP0C0L5 1744 aa0.44□□□□□ -2.34
TARDBP-208ENST00000477447 APLNQ9ULZ1 77 aa0.43□□□□□ -2.34
TARDBP-208ENST00000477447 DSPP15924 2871 aaKnown RBP0.43□□□□□ -2.34
TARDBP-208ENST00000477447 MYO7AQ13402 2215 aa0.42□□□□□ -2.34
TARDBP-208ENST00000477447 MUC5BQ9HC84 5762 aaPredicted RBP0.42□□□□□ -2.34
TARDBP-208ENST00000477447 KLK9Q2XQG4 91 aa0.42□□□□□ -2.34
TARDBP-208ENST00000477447 ZDBF2Q9HCK1 2354 aa0.42□□□□□ -2.34
TARDBP-208ENST00000477447 ASCC3Q8N3C0 2202 aaKnown RBP0.42□□□□□ -2.34
TARDBP-208ENST00000477447 ANKRD36CQ5JPF3 1778 aa0.42□□□□□ -2.34
TARDBP-208ENST00000477447 POLQO75417 2590 aa0.42□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms