RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, humanhuman

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-208ENST00000475912 TNFSF18Q9UNG2 199 aa2.07□□□□□ -2.08
PRKD3-208ENST00000475912 A0A0B4J2C4 111 aa2.06□□□□□ -2.08
PRKD3-208ENST00000475912 TRBV27A0A0K0K1C4 114 aa2.06□□□□□ -2.08
PRKD3-208ENST00000475912 TMEM238C9JI98 176 aa2.06□□□□□ -2.08
PRKD3-208ENST00000475912 F2Z2F3 143 aa2.06□□□□□ -2.08
PRKD3-208ENST00000475912 LYRM1O43325 122 aa2.06□□□□□ -2.08
PRKD3-208ENST00000475912 SLC25A20O43772 301 aa2.06□□□□□ -2.08
PRKD3-208ENST00000475912 S100A2P29034 98 aa2.06□□□□□ -2.08
PRKD3-208ENST00000475912 POLR2KP53803 58 aaKnown RBP2.06□□□□□ -2.08
PRKD3-208ENST00000475912 RPS29P62273 56 aaKnown RBP2.06□□□□□ -2.08
PRKD3-208ENST00000475912 SERF2P84101 59 aa2.06□□□□□ -2.08
PRKD3-208ENST00000475912 Q6Q795 121 aa2.06□□□□□ -2.08
PRKD3-208ENST00000475912 C9orf62Q8N4C0 152 aa2.06□□□□□ -2.08
PRKD3-208ENST00000475912 CNFNQ9BYD5 112 aa2.06□□□□□ -2.08
PRKD3-208ENST00000475912 C8orf87E5RJ46 101 aa2.05□□□□□ -2.08
PRKD3-208ENST00000475912 IGLV6-57P01721 117 aa2.05□□□□□ -2.08
PRKD3-208ENST00000475912 PET100P0DJ07 73 aa2.05□□□□□ -2.08
PRKD3-208ENST00000475912 RPS20P60866 119 aaKnown RBP2.05□□□□□ -2.08
PRKD3-208ENST00000475912 S100A12P80511 92 aa2.05□□□□□ -2.08
PRKD3-208ENST00000475912 KRTAP25-1Q3LHN0 102 aa2.05□□□□□ -2.08
PRKD3-208ENST00000475912 SLC51BQ86UW2 128 aa2.05□□□□□ -2.08
PRKD3-208ENST00000475912 HIGD2AQ9BW72 106 aa2.05□□□□□ -2.08
PRKD3-208ENST00000475912 TMEM126AQ9H061 195 aa2.05□□□□□ -2.08
PRKD3-208ENST00000475912 ST20Q9HBF5 79 aa2.05□□□□□ -2.08
PRKD3-208ENST00000475912 MAP1LC3B2A6NCE7 125 aa2.04□□□□□ -2.08
PRKD3-208ENST00000475912 TMEM250H0YL14 139 aa2.04□□□□□ -2.08
PRKD3-208ENST00000475912 M0R378 163 aa2.04□□□□□ -2.08
PRKD3-208ENST00000475912 IFNA1P01562 189 aa2.04□□□□□ -2.08
PRKD3-208ENST00000475912 P0C880 135 aa2.04□□□□□ -2.08
PRKD3-208ENST00000475912 RPL35P42766 123 aaKnown RBP2.04□□□□□ -2.08
PRKD3-208ENST00000475912 RPL39P62891 51 aaKnown RBP2.04□□□□□ -2.08
PRKD3-208ENST00000475912 TEX261Q6UWH6 196 aa2.04□□□□□ -2.08
PRKD3-208ENST00000475912 FAM19A3Q7Z5A8 133 aa2.04□□□□□ -2.08
PRKD3-208ENST00000475912 AKAP14Q86UN6 197 aa2.04□□□□□ -2.08
PRKD3-208ENST00000475912 TIMM21Q9BVV7 248 aa2.04□□□□□ -2.08
PRKD3-208ENST00000475912 MAP1LC3BQ9GZQ8 125 aa2.04□□□□□ -2.08
PRKD3-208ENST00000475912 TGIF2-C20orf24A0A0A6YYL0 155 aa2.03□□□□□ -2.08
PRKD3-208ENST00000475912 A6NED7 52 aa2.03□□□□□ -2.08
PRKD3-208ENST00000475912 S100A6P06703 90 aa2.03□□□□□ -2.08
PRKD3-208ENST00000475912 KRTAP2-3P0C7H8 128 aa2.03□□□□□ -2.08
PRKD3-208ENST00000475912 FCER1GP30273 86 aa2.03□□□□□ -2.08
PRKD3-208ENST00000475912 RPL37P61927 97 aaKnown RBP2.03□□□□□ -2.08
PRKD3-208ENST00000475912 CENPWQ5EE01 88 aa2.03□□□□□ -2.08
PRKD3-208ENST00000475912 RPL7L1Q6DKI1 246 aaKnown RBP2.03□□□□□ -2.08
PRKD3-208ENST00000475912 CCDC32Q9BV29 185 aa2.03□□□□□ -2.08
PRKD3-208ENST00000475912 KRTAP2-4Q9BYR9 128 aa2.03□□□□□ -2.08
PRKD3-208ENST00000475912 TRBV20OR9-2A0A075B6H5 130 aa2.02□□□□□ -2.09
PRKD3-208ENST00000475912 A0A1B0GV50 99 aa2.02□□□□□ -2.09
PRKD3-208ENST00000475912 SMLR1H3BR10 107 aa2.02□□□□□ -2.09
PRKD3-208ENST00000475912 MP68P56378 58 aa2.02□□□□□ -2.09
PRKD3-208ENST00000475912 CKS1BP61024 79 aa2.02□□□□□ -2.09
PRKD3-208ENST00000475912 RAB14P61106 215 aa2.02□□□□□ -2.09
PRKD3-208ENST00000475912 HBBP68871 147 aa2.02□□□□□ -2.09
PRKD3-208ENST00000475912 GNB1LQ9BYB4 327 aa2.02□□□□□ -2.09
PRKD3-208ENST00000475912 TOMM7Q9P0U1 55 aa2.02□□□□□ -2.09
PRKD3-208ENST00000475912 F8VRH5 84 aa2.01□□□□□ -2.09
PRKD3-208ENST00000475912 MRPS36P82909 103 aaKnown RBP2.01□□□□□ -2.09
PRKD3-208ENST00000475912 SMAGPQ0VAQ4 97 aa2.01□□□□□ -2.09
PRKD3-208ENST00000475912 AKR1C8PQ5T2L2 129 aa2.01□□□□□ -2.09
PRKD3-208ENST00000475912 BOD1L2Q8IYS8 172 aa2.01□□□□□ -2.09
PRKD3-208ENST00000475912 Q8IZM0 81 aa2.01□□□□□ -2.09
PRKD3-208ENST00000475912 Q8NDZ9 215 aa2.01□□□□□ -2.09
PRKD3-208ENST00000475912 SPANXA1Q9NS26 97 aa2.01□□□□□ -2.09
PRKD3-208ENST00000475912 LOC105371267A0A1B0GV96 52 aa2□□□□□ -2.09
PRKD3-208ENST00000475912 LGALS3P17931 250 aaKnown RBP2□□□□□ -2.09
PRKD3-208ENST00000475912 GNG4P50150 75 aa2□□□□□ -2.09
PRKD3-208ENST00000475912 SMIM15Q7Z3B0 74 aa2□□□□□ -2.09
PRKD3-208ENST00000475912 SSNA1O43805 119 aa1.99□□□□□ -2.09
PRKD3-208ENST00000475912 RAB5BP61020 215 aa1.99□□□□□ -2.09
PRKD3-208ENST00000475912 CCL20P78556 96 aa1.99□□□□□ -2.09
PRKD3-208ENST00000475912 Q5BKY6 102 aa1.99□□□□□ -2.09
PRKD3-208ENST00000475912 SSBP3-AS1Q7Z2R9 100 aa1.99□□□□□ -2.09
PRKD3-208ENST00000475912 TCTE3Q8IZS6 198 aa1.99□□□□□ -2.09
PRKD3-208ENST00000475912 SMCR5Q8TEV8 140 aa1.99□□□□□ -2.09
PRKD3-208ENST00000475912 SFT2D1Q8WV19 159 aa1.99□□□□□ -2.09
PRKD3-208ENST00000475912 SMIM12Q96EX1 92 aa1.99□□□□□ -2.09
PRKD3-208ENST00000475912 TMEM191AQ9H0A3 160 aa1.99□□□□□ -2.09
PRKD3-208ENST00000475912 MED9Q9NWA0 146 aa1.99□□□□□ -2.09
PRKD3-208ENST00000475912 TRBV24-1A0A075B6N3 115 aa1.98□□□□□ -2.09
PRKD3-208ENST00000475912 BORCS7-ASMTA0A0B4J1R7 106 aa1.98□□□□□ -2.09
PRKD3-208ENST00000475912 A0A1B0GU33 70 aa1.98□□□□□ -2.09
PRKD3-208ENST00000475912 LINC00862A6NCI5 91 aa1.98□□□□□ -2.09
PRKD3-208ENST00000475912 IFITM2Q01629 132 aa1.98□□□□□ -2.09
PRKD3-208ENST00000475912 KCNRGQ8N5I3 272 aa1.98□□□□□ -2.09
PRKD3-208ENST00000475912 MBD3L1Q8WWY6 194 aa1.98□□□□□ -2.09
PRKD3-208ENST00000475912 C20orf202A1L168 122 aa1.97□□□□□ -2.09
PRKD3-208ENST00000475912 ERC2-IT1O76042 136 aa1.97□□□□□ -2.09
PRKD3-208ENST00000475912 CLLU1Q5K131 121 aa1.97□□□□□ -2.09
PRKD3-208ENST00000475912 C10orf91Q5T1B1 145 aa1.97□□□□□ -2.09
PRKD3-208ENST00000475912 FAM213BQ8TBF2 198 aa1.97□□□□□ -2.09
PRKD3-208ENST00000475912 EIF5A2Q9GZV4 153 aaKnown RBP1.97□□□□□ -2.09
PRKD3-208ENST00000475912 CDKN2A-AS1Q9UH64 79 aa1.97□□□□□ -2.09
PRKD3-208ENST00000475912 PPP1R17O96001 155 aa1.96□□□□□ -2.1
PRKD3-208ENST00000475912 S100A8P05109 93 aa1.96□□□□□ -2.1
PRKD3-208ENST00000475912 S100PP25815 95 aa1.96□□□□□ -2.1
PRKD3-208ENST00000475912 SPRR1AP35321 89 aa1.96□□□□□ -2.1
PRKD3-208ENST00000475912 IFI27P40305 119 aaPredicted RBP1.96□□□□□ -2.1
PRKD3-208ENST00000475912 MRPL51Q4U2R6 128 aaKnown RBP1.96□□□□□ -2.1
PRKD3-208ENST00000475912 C9orf153Q5TBE3 101 aa1.96□□□□□ -2.1
PRKD3-208ENST00000475912 HRCT1Q6UXD1 115 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms