RNA–Protein interactions for RNA: ENST00000475524.1

MCF2L-224, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-224ENST00000475524 Q5VSD8 79 aa9.33□□□□□ -0.92
MCF2L-224ENST00000475524 NHP2Q9NX24 153 aaKnown RBP9.33□□□□□ -0.92
MCF2L-224ENST00000475524 PRO1854Q9UHT4 67 aa9.33□□□□□ -0.92
MCF2L-224ENST00000475524 RPL13AP40429 203 aaKnown RBP9.32□□□□□ -0.92
MCF2L-224ENST00000475524 KRTAP10-4P60372 401 aaPredicted RBP9.32□□□□□ -0.92
MCF2L-224ENST00000475524 DIRC1Q969H9 104 aa9.32□□□□□ -0.92
MCF2L-224ENST00000475524 IGLV7-43P04211 117 aa9.31□□□□□ -0.92
MCF2L-224ENST00000475524 HINT1P49773 126 aaPredicted RBP9.31□□□□□ -0.92
MCF2L-224ENST00000475524 ETDCA0A1B0GVM5 59 aa9.3□□□□□ -0.92
MCF2L-224ENST00000475524 RPL28P46779 137 aaKnown RBP9.3□□□□□ -0.92
MCF2L-224ENST00000475524 KRTAP13-1Q8IUC0 172 aa9.3□□□□□ -0.92
MCF2L-224ENST00000475524 SMIM11BQ8TCY0 68 aa9.3□□□□□ -0.92
MCF2L-224ENST00000475524 ZNF861PO60384 105 aa9.28□□□□□ -0.92
MCF2L-224ENST00000475524 C6orf99Q4VX62 202 aa9.28□□□□□ -0.92
MCF2L-224ENST00000475524 Q6ZRX8 168 aa9.28□□□□□ -0.92
MCF2L-224ENST00000475524 FAM19A1Q7Z5A9 133 aa9.28□□□□□ -0.92
MCF2L-224ENST00000475524 B5MCH6 92 aa9.27□□□□□ -0.93
MCF2L-224ENST00000475524 UBE2AP49459 152 aa9.27□□□□□ -0.93
MCF2L-224ENST00000475524 BIRC6Q9NR09 4857 aa9.26□□□□□ -0.93
MCF2L-224ENST00000475524 ELOF1P60002 83 aaKnown RBP9.26□□□□□ -0.93
MCF2L-224ENST00000475524 VAMP3Q15836 100 aa9.26□□□□□ -0.93
MCF2L-224ENST00000475524 SPINK6Q6UWN8 80 aa9.26□□□□□ -0.93
MCF2L-224ENST00000475524 KIAA1109Q2LD37 5005 aa9.26□□□□□ -0.93
MCF2L-224ENST00000475524 HSPG2P98160 4391 aa9.24□□□□□ -0.93
MCF2L-224ENST00000475524 K7ERJ3 54 aa9.24□□□□□ -0.93
MCF2L-224ENST00000475524 INAFM2P0DMQ5 153 aa9.24□□□□□ -0.93
MCF2L-224ENST00000475524 COX7BP24311 80 aa9.24□□□□□ -0.93
MCF2L-224ENST00000475524 Q1RN00 199 aa9.24□□□□□ -0.93
MCF2L-224ENST00000475524 KRTAP17-1Q9BYP8 105 aa9.24□□□□□ -0.93
MCF2L-224ENST00000475524 RYR1P21817 5038 aa9.24□□□□□ -0.93
MCF2L-224ENST00000475524 PRLHP81277 87 aa9.23□□□□□ -0.93
MCF2L-224ENST00000475524 DHRS4-AS1Q9P1J3 65 aa9.23□□□□□ -0.93
MCF2L-224ENST00000475524 H7C2G1 150 aa9.22□□□□□ -0.93
MCF2L-224ENST00000475524 H0YGX0 51 aa9.21□□□□□ -0.94
MCF2L-224ENST00000475524 TSPAN13O95857 204 aa9.21□□□□□ -0.94
MCF2L-224ENST00000475524 COX6CP09669 75 aa9.2□□□□□ -0.94
MCF2L-224ENST00000475524 BATFQ16520 125 aa9.2□□□□□ -0.94
MCF2L-224ENST00000475524 SNHG12Q9BXW3 62 aa9.2□□□□□ -0.94
MCF2L-224ENST00000475524 PCP4L1A6NKN8 68 aa9.19□□□□□ -0.94
MCF2L-224ENST00000475524 SMCR5Q8TEV8 140 aa9.19□□□□□ -0.94
MCF2L-224ENST00000475524 Q9BRP9 147 aa9.19□□□□□ -0.94
MCF2L-224ENST00000475524 HIGD2AQ9BW72 106 aa9.19□□□□□ -0.94
MCF2L-224ENST00000475524 TRIAP1O43715 76 aa9.18□□□□□ -0.94
MCF2L-224ENST00000475524 A0A1B0GX51 115 aa9.17□□□□□ -0.94
MCF2L-224ENST00000475524 SLC25A20O43772 301 aa9.17□□□□□ -0.94
MCF2L-224ENST00000475524 PSMB2P49721 201 aa9.17□□□□□ -0.94
MCF2L-224ENST00000475524 LINC00575Q6W349 94 aa9.17□□□□□ -0.94
MCF2L-224ENST00000475524 ZNF706Q9Y5V0 76 aaPredicted RBP9.17□□□□□ -0.94
MCF2L-224ENST00000475524 SNCGO76070 127 aa9.16□□□□□ -0.94
MCF2L-224ENST00000475524 COL5A1-AS1Q5SY13 56 aa9.15□□□□□ -0.94
MCF2L-224ENST00000475524 SRRM2Q9UQ35 2752 aaKnown RBP9.14□□□□□ -0.95
MCF2L-224ENST00000475524 LYRM7Q5U5X0 104 aa9.14□□□□□ -0.95
MCF2L-224ENST00000475524 hADV29S1A0JD25 119 aa9.13□□□□□ -0.95
MCF2L-224ENST00000475524 VPS13BQ7Z7G8 4022 aa9.12□□□□□ -0.95
MCF2L-224ENST00000475524 FAT1Q14517 4588 aa9.12□□□□□ -0.95
MCF2L-224ENST00000475524 TAX1BP3O14907 124 aa9.12□□□□□ -0.95
MCF2L-224ENST00000475524 ERC2-IT1O76042 136 aa9.12□□□□□ -0.95
MCF2L-224ENST00000475524 KRTAP4-5Q9BYR2 181 aa9.12□□□□□ -0.95
MCF2L-224ENST00000475524 C9orf118A6NHY6 69 aa9.11□□□□□ -0.95
MCF2L-224ENST00000475524 SPRR4Q96PI1 79 aa9.11□□□□□ -0.95
MCF2L-224ENST00000475524 FAM229BQ4G0N7 80 aa9.1□□□□□ -0.95
MCF2L-224ENST00000475524 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.1□□□□□ -0.95
MCF2L-224ENST00000475524 IGLV5-48A0A075B6I7 105 aa9.09□□□□□ -0.95
MCF2L-224ENST00000475524 KRTAP1-4P0C5Y4 121 aa9.09□□□□□ -0.95
MCF2L-224ENST00000475524 SCGB1C2P0DMR2 95 aa9.09□□□□□ -0.95
MCF2L-224ENST00000475524 SPRR1BP22528 89 aa9.09□□□□□ -0.95
MCF2L-224ENST00000475524 LINC00483Q53H64 154 aa9.09□□□□□ -0.95
MCF2L-224ENST00000475524 OCIAD2Q56VL3 154 aa9.09□□□□□ -0.95
MCF2L-224ENST00000475524 H3BUT2 72 aa9.08□□□□□ -0.96
MCF2L-224ENST00000475524 GHRHP01286 108 aa9.08□□□□□ -0.96
MCF2L-224ENST00000475524 PPDPFLQ8WWR9 84 aa9.08□□□□□ -0.96
MCF2L-224ENST00000475524 FAM218AQ96MZ4 157 aa9.08□□□□□ -0.96
MCF2L-224ENST00000475524 HERC2O95714 4834 aa9.08□□□□□ -0.96
MCF2L-224ENST00000475524 LST1O00453 97 aa9.07□□□□□ -0.96
MCF2L-224ENST00000475524 TRACP01848 142 aa9.07□□□□□ -0.96
MCF2L-224ENST00000475524 TRBV20-1A0A075B6N2 111 aa9.06□□□□□ -0.96
MCF2L-224ENST00000475524 H3BQ85 93 aa9.06□□□□□ -0.96
MCF2L-224ENST00000475524 OXTP01178 125 aa9.06□□□□□ -0.96
MCF2L-224ENST00000475524 Q6ZQY7 126 aa9.06□□□□□ -0.96
MCF2L-224ENST00000475524 CLEC2BQ92478 149 aa9.06□□□□□ -0.96
MCF2L-224ENST00000475524 TEX49A0A1B0GTD5 131 aa9.05□□□□□ -0.96
MCF2L-224ENST00000475524 A0A1W2PPM0 123 aa9.05□□□□□ -0.96
MCF2L-224ENST00000475524 LINC01600Q96MT4 127 aa9.05□□□□□ -0.96
MCF2L-224ENST00000475524 DNAL4O96015 105 aa9.04□□□□□ -0.96
MCF2L-224ENST00000475524 ST20-AS1Q8NBB2 130 aa9.04□□□□□ -0.96
MCF2L-224ENST00000475524 NAA38Q9BRA0 125 aaKnown RBP9.04□□□□□ -0.96
MCF2L-224ENST00000475524 FABP2P12104 132 aa9.03□□□□□ -0.96
MCF2L-224ENST00000475524 LINC01547P58512 204 aaPredicted RBP9.03□□□□□ -0.96
MCF2L-224ENST00000475524 ATXN8Q156A1 80 aa9.03□□□□□ -0.96
MCF2L-224ENST00000475524 GAGE2AQ6NT46 116 aa9.03□□□□□ -0.96
MCF2L-224ENST00000475524 CRYGAP11844 174 aa9.02□□□□□ -0.97
MCF2L-224ENST00000475524 KRTAP29-1A8MX34 341 aaPredicted RBP9.01□□□□□ -0.97
MCF2L-224ENST00000475524 TCL1BO95988 128 aa9.01□□□□□ -0.97
MCF2L-224ENST00000475524 Q8N377 158 aa9□□□□□ -0.97
MCF2L-224ENST00000475524 ORMDL1Q9P0S3 153 aa9□□□□□ -0.97
MCF2L-224ENST00000475524 PKHD1L1Q86WI1 4243 aa9□□□□□ -0.97
MCF2L-224ENST00000475524 LAMTOR3Q9UHA4 124 aa8.99□□□□□ -0.97
MCF2L-224ENST00000475524 A0A087X002 238 aa8.98□□□□□ -0.97
MCF2L-224ENST00000475524 DEFB105AQ8NG35 78 aa8.98□□□□□ -0.97
MCF2L-224ENST00000475524 TMEM256-PLSCR3K7ERE1 68 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms