RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 LINC00167Q96N53 147 aa8.01□□□□□ -1.13
TPM3-216ENST00000473036 A0A0B4J2C4 111 aa8□□□□□ -1.13
TPM3-216ENST00000473036 MT1HL1P0DM35 61 aa7.99□□□□□ -1.13
TPM3-216ENST00000473036 RNF213Q63HN8 5207 aa7.99□□□□□ -1.13
TPM3-216ENST00000473036 GAGE10A6NGK3 116 aa7.98□□□□□ -1.13
TPM3-216ENST00000473036 RPL37AP8A6NKH3 93 aa7.98□□□□□ -1.13
TPM3-216ENST00000473036 IGLV7-43P04211 117 aa7.98□□□□□ -1.13
TPM3-216ENST00000473036 UBE2BP63146 152 aa7.98□□□□□ -1.13
TPM3-216ENST00000473036 BVES-AS1Q5T3Y7 98 aa7.98□□□□□ -1.13
TPM3-216ENST00000473036 OR13C6PQ8NH95 151 aa7.98□□□□□ -1.13
TPM3-216ENST00000473036 HINT1P49773 126 aaPredicted RBP7.97□□□□□ -1.13
TPM3-216ENST00000473036 SPINK6Q6UWN8 80 aa7.97□□□□□ -1.13
TPM3-216ENST00000473036 PRO1854Q9UHT4 67 aa7.97□□□□□ -1.13
TPM3-216ENST00000473036 EIF4EBP3O60516 100 aaPredicted RBP7.96□□□□□ -1.14
TPM3-216ENST00000473036 IGLV6-57P01721 117 aa7.96□□□□□ -1.14
TPM3-216ENST00000473036 CFC1BP0CG36 223 aa7.96□□□□□ -1.14
TPM3-216ENST00000473036 CFC1P0CG37 223 aa7.96□□□□□ -1.14
TPM3-216ENST00000473036 FXYD2P54710 66 aa7.96□□□□□ -1.14
TPM3-216ENST00000473036 LRP2P98164 4655 aa7.96□□□□□ -1.14
TPM3-216ENST00000473036 IGKV2-28A0A075B6P5 120 aa7.95□□□□□ -1.14
TPM3-216ENST00000473036 A0A1B0GWB2 263 aa7.95□□□□□ -1.14
TPM3-216ENST00000473036 PCP4L1A6NKN8 68 aa7.95□□□□□ -1.14
TPM3-216ENST00000473036 NCR3O14931 201 aa7.95□□□□□ -1.14
TPM3-216ENST00000473036 IGKV2D-28P01615 120 aa7.95□□□□□ -1.14
TPM3-216ENST00000473036 NHP2Q9NX24 153 aaKnown RBP7.95□□□□□ -1.14
TPM3-216ENST00000473036 IGLV1-50A0A075B6I6 118 aa7.94□□□□□ -1.14
TPM3-216ENST00000473036 VAMP3Q15836 100 aa7.94□□□□□ -1.14
TPM3-216ENST00000473036 KCNQ1DNQ9H478 68 aa7.94□□□□□ -1.14
TPM3-216ENST00000473036 PRYO14603 147 aa7.93□□□□□ -1.14
TPM3-216ENST00000473036 TRBV10-3A0A0K0K1G6 114 aa7.92□□□□□ -1.14
TPM3-216ENST00000473036 LINC00337Q8N6G1 96 aa7.92□□□□□ -1.14
TPM3-216ENST00000473036 TRAV23DV6A0A075B6W5 121 aa7.91□□□□□ -1.14
TPM3-216ENST00000473036 TRBV7-6A0A0J9YX20 115 aa7.91□□□□□ -1.14
TPM3-216ENST00000473036 SNCGO76070 127 aa7.91□□□□□ -1.14
TPM3-216ENST00000473036 COX6CP09669 75 aa7.91□□□□□ -1.14
TPM3-216ENST00000473036 RPL13AP40429 203 aaKnown RBP7.91□□□□□ -1.14
TPM3-216ENST00000473036 BATFQ16520 125 aa7.91□□□□□ -1.14
TPM3-216ENST00000473036 KRTAP13-1Q8IUC0 172 aa7.91□□□□□ -1.14
TPM3-216ENST00000473036 LINC01600Q96MT4 127 aa7.91□□□□□ -1.14
TPM3-216ENST00000473036 BCE1O60756 84 aa7.9□□□□□ -1.14
TPM3-216ENST00000473036 KRTAP1-4P0C5Y4 121 aa7.9□□□□□ -1.14
TPM3-216ENST00000473036 Q1RN00 199 aa7.9□□□□□ -1.14
TPM3-216ENST00000473036 COL5A1-AS1Q5SY13 56 aa7.9□□□□□ -1.14
TPM3-216ENST00000473036 REG3GQ6UW15 175 aa7.9□□□□□ -1.14
TPM3-216ENST00000473036 H0Y9J4 135 aa7.89□□□□□ -1.15
TPM3-216ENST00000473036 ZNF73O43830 326 aaPredicted RBP7.89□□□□□ -1.15
TPM3-216ENST00000473036 ZNF861PO60384 105 aa7.89□□□□□ -1.15
TPM3-216ENST00000473036 RPL28P46779 137 aaKnown RBP7.89□□□□□ -1.15
TPM3-216ENST00000473036 KRTAP10-8P60410 259 aa7.89□□□□□ -1.15
TPM3-216ENST00000473036 H0YGX0 51 aa7.88□□□□□ -1.15
TPM3-216ENST00000473036 DIRC1Q969H9 104 aa7.88□□□□□ -1.15
TPM3-216ENST00000473036 ETDCA0A1B0GVM5 59 aa7.87□□□□□ -1.15
TPM3-216ENST00000473036 LYRM7Q5U5X0 104 aa7.87□□□□□ -1.15
TPM3-216ENST00000473036 H7C2G1 150 aa7.86□□□□□ -1.15
TPM3-216ENST00000473036 SPRR1AP35321 89 aa7.86□□□□□ -1.15
TPM3-216ENST00000473036 PSMB2P49721 201 aa7.86□□□□□ -1.15
TPM3-216ENST00000473036 SMIM11BQ8TCY0 68 aa7.86□□□□□ -1.15
TPM3-216ENST00000473036 SNHG12Q9BXW3 62 aa7.86□□□□□ -1.15
TPM3-216ENST00000473036 KRTAP3-3Q9BYR6 98 aa7.85□□□□□ -1.15
TPM3-216ENST00000473036 KRTAP3-2Q9BYR7 98 aa7.85□□□□□ -1.15
TPM3-216ENST00000473036 LPAP08519 4548 aa7.84□□□□□ -1.15
TPM3-216ENST00000473036 KRTAP4-16G5E9R7 235 aaPredicted RBP7.84□□□□□ -1.15
TPM3-216ENST00000473036 K7ERJ3 54 aa7.84□□□□□ -1.15
TPM3-216ENST00000473036 SLC25A20O43772 301 aa7.84□□□□□ -1.15
TPM3-216ENST00000473036 PRLHP81277 87 aa7.84□□□□□ -1.15
TPM3-216ENST00000473036 C6orf99Q4VX62 202 aa7.84□□□□□ -1.15
TPM3-216ENST00000473036 GHRHP01286 108 aa7.83□□□□□ -1.16
TPM3-216ENST00000473036 SCGB1C2P0DMR2 95 aa7.83□□□□□ -1.16
TPM3-216ENST00000473036 COX7BP24311 80 aa7.83□□□□□ -1.16
TPM3-216ENST00000473036 UBE2AP49459 152 aa7.83□□□□□ -1.16
TPM3-216ENST00000473036 DHRS4-AS1Q9P1J3 65 aa7.83□□□□□ -1.16
TPM3-216ENST00000473036 A0A1B0GX51 115 aa7.82□□□□□ -1.16
TPM3-216ENST00000473036 TSPAN13O95857 204 aa7.82□□□□□ -1.16
TPM3-216ENST00000473036 ELOF1P60002 83 aaKnown RBP7.82□□□□□ -1.16
TPM3-216ENST00000473036 FAM19A1Q7Z5A9 133 aa7.82□□□□□ -1.16
TPM3-216ENST00000473036 PRR26Q8N8Z3 221 aa7.82□□□□□ -1.16
TPM3-216ENST00000473036 C9orf118A6NHY6 69 aa7.81□□□□□ -1.16
TPM3-216ENST00000473036 Q6ZRX8 168 aa7.81□□□□□ -1.16
TPM3-216ENST00000473036 B5MCH6 92 aa7.8□□□□□ -1.16
TPM3-216ENST00000473036 ANAPC11Q9NYG5 84 aa7.8□□□□□ -1.16
TPM3-216ENST00000473036 TRBV20-1A0A075B6N2 111 aa7.79□□□□□ -1.16
TPM3-216ENST00000473036 TRIAP1O43715 76 aa7.79□□□□□ -1.16
TPM3-216ENST00000473036 A0A087X002 238 aa7.78□□□□□ -1.16
TPM3-216ENST00000473036 H3BQ85 93 aa7.78□□□□□ -1.16
TPM3-216ENST00000473036 TAX1BP3O14907 124 aa7.78□□□□□ -1.16
TPM3-216ENST00000473036 FABP2P12104 132 aa7.78□□□□□ -1.16
TPM3-216ENST00000473036 H3BUT2 72 aa7.77□□□□□ -1.17
TPM3-216ENST00000473036 LINC00575Q6W349 94 aa7.77□□□□□ -1.17
TPM3-216ENST00000473036 hADV29S1A0JD25 119 aa7.76□□□□□ -1.17
TPM3-216ENST00000473036 OCIAD2Q56VL3 154 aa7.76□□□□□ -1.17
TPM3-216ENST00000473036 SMCR5Q8TEV8 140 aa7.76□□□□□ -1.17
TPM3-216ENST00000473036 ZNF706Q9Y5V0 76 aaPredicted RBP7.76□□□□□ -1.17
TPM3-216ENST00000473036 A0A1W2PPM0 123 aa7.75□□□□□ -1.17
TPM3-216ENST00000473036 DNAL4O96015 105 aa7.75□□□□□ -1.17
TPM3-216ENST00000473036 ATXN8Q156A1 80 aa7.74□□□□□ -1.17
TPM3-216ENST00000473036 KRTAP13-2Q52LG2 175 aa7.74□□□□□ -1.17
TPM3-216ENST00000473036 Q9BRP9 147 aa7.74□□□□□ -1.17
TPM3-216ENST00000473036 HIGD2AQ9BW72 106 aa7.74□□□□□ -1.17
TPM3-216ENST00000473036 ERC2-IT1O76042 136 aa7.73□□□□□ -1.17
TPM3-216ENST00000473036 TRACP01848 142 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms